Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO591G0315 Papaver somniferum HOM05D004605 ORTHO05D005804 1.3e-50 202.6 94 100.0
PSO675G6317 Papaver somniferum HOM05D004605 ORTHO05D005804 5.6e-41 170.6 79 98.7
PSO732G0027 Papaver somniferum HOM05D004605 ORTHO05D005804 2.4e-39 165.2 79 96.2
Aqoxy3G03715 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 1.3e-34 149.4 86 76.7
Dinv33862 Davidia involucrata HOM05D004605 ORTHO05D005804 3.7e-32 141.4 86 69.8
TAR629G2115 Trochodendron aralioides HOM05D004605 ORTHO05D005804 4.8e-32 141.0 78 78.2
Lju361C6G5 Lonicera japonica HOM05D004605 ORTHO05D005804 1.1e-31 139.8 78 74.4
Hma1.2p1_0474F.1_g160750 Hydrangea macrophylla HOM05D004605 ORTHO05D005804 3.1e-31 138.3 87 70.1
Actinidia26268 Actinidia chinensis HOM05D004605 ORTHO05D005804 4.0e-31 137.9 85 68.2
CANSAT64G2231 Cannabis sativa HOM05D004605 ORTHO05D005804 4.0e-31 137.9 82 68.3
AUR62024435 Chenopodium quinoa HOM05D004605 ORTHO05D005804 5.3e-31 137.5 79 75.9
Oeu031839.1 Olea europaea HOM05D004605 ORTHO05D005804 5.3e-31 137.5 73 78.1
Sabra17G0086200 Salix brachista HOM05D004605 ORTHO05D005804 6.9e-31 137.1 89 68.5
GSVIVG01036547001 Vitis vinifera HOM05D004605 ORTHO05D005804 6.9e-31 137.1 88 65.9
CAN.G497.71 Capsicum annuum HOM05D004605 ORTHO05D005804 9.0e-31 136.7 78 71.8
Potri.017G100000 Populus trichocarpa HOM05D004605 ORTHO05D005804 1.2e-30 136.3 78 73.1
Hund16233 Selenicereus undatus HOM05D004605 ORTHO05D005804 1.2e-30 136.3 77 74.0
Aqoxy3G03716 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 1.5e-30 136.0 86 67.4
SalBow1G3999 Salvia bowleyana HOM05D004605 ORTHO05D005804 1.5e-30 136.0 79 72.2
Aqoxy3G03714 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 2.0e-30 135.6 86 70.9
Os03g0598900 Oryza sativa ssp. japonica HOM05D004605 ORTHO05D005804 2.6e-30 135.2 78 71.8
SGA_v2.0_scaffold148G36445 Striga asiatica HOM05D004605 ORTHO05D005804 2.6e-30 135.2 77 75.3
Ciclev10012619m.g Citrus clementina HOM05D004605 ORTHO05D005804 3.4e-30 134.8 86 68.6
Nitab4.5_0001339g0150 Nicotiana tabacum HOM05D004605 ORTHO05D005804 3.4e-30 134.8 85 67.1
Peaxi162Scf00020g10235 Petunia axillaris HOM05D004605 ORTHO05D005804 5.8e-30 134.0 84 66.7
Lsat_1_v5_gn_2_90241 Lactuca sativa HOM05D004605 ORTHO05D005804 7.6e-30 133.7 78 71.8
Solyc02g089230.3 Solanum lycopersicum HOM05D004605 ORTHO05D005804 7.6e-30 133.7 85 64.7
Cpa.g.sc14.228 Carica papaya HOM05D004605 ORTHO05D005804 1.3e-29 132.9 84 69.0
Manes.02G059400 Manihot esculenta HOM05D004605 ORTHO05D005804 1.3e-29 132.9 78 71.8
Nitab4.5_0007530g0010 Nicotiana tabacum HOM05D004605 ORTHO05D005804 1.3e-29 132.9 78 70.5
QL02p065873 Quercus lobata HOM05D004605 ORTHO05D005804 1.3e-29 132.9 79 68.4
Zm00001eb219300 Zea mays HOM05D004605 ORTHO05D005804 1.3e-29 132.9 73 76.7
COL.COLO4_10258 Corchorus olitorius HOM05D004605 ORTHO05D005804 1.7e-29 132.5 76 73.7
Migut.H00587 Erythranthe guttata HOM05D004605 ORTHO05D005804 1.7e-29 132.5 79 68.4
Atru.chr8.648 Acer truncatum HOM05D004605 ORTHO05D005804 3.8e-29 131.3 78 70.5
Sopen02g034020 Solanum pennellii HOM05D004605 ORTHO05D005804 3.8e-29 131.3 78 67.9
PGSC0003DMG400001379 Solanum tuberosum HOM05D004605 ORTHO05D005804 3.8e-29 131.3 78 67.9
Thecc.04G106100 Theobroma cacao HOM05D004605 ORTHO05D005804 6.4e-29 130.6 76 72.4
Duzib133G0947 Durio zibethinus HOM05D004605 ORTHO05D005804 8.4e-29 130.2 87 65.5
Gohir.D07G186600 Gossypium hirsutum HOM05D004605 ORTHO05D005804 8.4e-29 130.2 86 66.3
Gorai.001G207200 Gossypium raimondii HOM05D004605 ORTHO05D005804 8.4e-29 130.2 86 66.3
TWI60G1007 Tripterygium wilfordii HOM05D004605 ORTHO05D005804 1.1e-28 129.8 76 71.1
MSTRG.15437 Avicennia marina HOM05D004605 ORTHO05D005804 1.4e-28 129.4 78 67.9
CiPaw.03G083000 Carya illinoinensis HOM05D004605 ORTHO05D005804 1.9e-28 129.0 79 64.6
Gohir.A07G179800 Gossypium hirsutum HOM05D004605 ORTHO05D005804 1.9e-28 129.0 74 71.6
Medtr7g016650 Medicago truncatula HOM05D004605 ORTHO05D005804 1.9e-28 129.0 87 64.4
Sc10g0000600 Simmondsia chinensis HOM05D004605 ORTHO05D005804 1.9e-28 129.0 77 66.2
Cc07_g04470 Coffea canephora HOM05D004605 ORTHO05D005804 2.5e-28 128.6 76 67.1
Carub.0007s3694 Capsella rubella HOM05D004605 ORTHO05D005804 4.2e-28 127.9 76 68.4
MELO3C026298.2 Cucumis melo HOM05D004605 ORTHO05D005804 4.2e-28 127.9 83 63.9
Manes.01G103400 Manihot esculenta HOM05D004605 ORTHO05D005804 4.2e-28 127.9 71 76.1
Rhsim08G0077200 Rhododendron simsii HOM05D004605 ORTHO05D005804 4.2e-28 127.9 74 71.6
AT5G38900 Arabidopsis thaliana HOM05D004605 ORTHO05D005804 7.1e-28 127.1 75 70.7
vmacro18128 Vaccinium macrocarpon HOM05D004605 ORTHO05D005804 7.1e-28 127.1 79 65.8
Zm00001eb049940 Zea mays HOM05D004605 ORTHO05D005804 7.1e-28 127.1 73 74.0
ClCG07G016040 Citrullus lanatus HOM05D004605 ORTHO05D005804 9.3e-28 126.7 73 71.2
Glyma.08G251200 Glycine max HOM05D004605 ORTHO05D005804 1.2e-27 126.3 79 67.1
QL02p053766 Quercus lobata HOM05D004605 ORTHO05D005804 1.2e-27 126.3 79 63.3
THA.LOC104805526 Tarenaya hassleriana HOM05D004605 ORTHO05D005804 1.2e-27 126.3 72 70.8
AL7G51520 Arabidopsis lyrata HOM05D004605 ORTHO05D005804 1.6e-27 125.9 75 68.0
BcaC08g44406 Brassica carinata HOM05D004605 ORTHO05D005804 1.6e-27 125.9 70 74.3
C06p18440 Brassica napus HOM05D004605 ORTHO05D005804 1.6e-27 125.9 70 74.3
BolC6t37056H Brassica oleracea HOM05D004605 ORTHO05D005804 1.6e-27 125.9 70 74.3
BraA07t29690Z Brassica rapa HOM05D004605 ORTHO05D005804 1.6e-27 125.9 70 74.3
Thhalv10027927m.g Eutrema salsugineum HOM05D004605 ORTHO05D005804 2.1e-27 125.6 75 70.7
HanXRQChr14g0452481 Helianthus annuus HOM05D004605 ORTHO05D005804 2.1e-27 125.6 77 66.2
Aa31LG9G16810 Aethionema arabicum HOM05D004605 ORTHO05D005804 2.7e-27 125.2 70 75.7
Cfa007695 Carpinus fangiana HOM05D004605 ORTHO05D005804 2.7e-27 125.2 80 67.5
Glyma.18G273900 Glycine max HOM05D004605 ORTHO05D005804 2.7e-27 125.2 79 64.6
Phvul.008G026800 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 2.7e-27 125.2 79 64.6
EL10Ac2g04442 Beta vulgaris HOM05D004605 ORTHO05D005804 3.5e-27 124.8 77 66.2
BcaB02g07994 Brassica carinata HOM05D004605 ORTHO05D005804 3.5e-27 124.8 70 74.3
A07p19860 Brassica napus HOM05D004605 ORTHO05D005804 3.5e-27 124.8 70 72.9
CsaV3_4G010080 Cucumis sativus L. HOM05D004605 ORTHO05D005804 3.5e-27 124.8 73 69.9
Sed0020846 Sechium edule HOM05D004605 ORTHO05D005804 3.5e-27 124.8 73 69.9
AUR62009481 Chenopodium quinoa HOM05D004605 ORTHO05D005804 4.6e-27 124.4 77 67.5
Lj1g0025970 Lotus japonicus HOM05D004605 ORTHO05D005804 4.6e-27 124.4 73 67.1
Lalb_Chr10g0092731 Lupinus albus HOM05D004605 ORTHO05D005804 4.6e-27 124.4 78 65.4
MBI16_g34534_MAGBIO Magnolia biondii HOM05D004605 ORTHO05D005804 4.6e-27 124.4 75 70.7
Sp7g03000 Schrenkiella parvula HOM05D004605 ORTHO05D005804 4.6e-27 124.4 75 69.3
Psat3g203400 Pisum sativum HOM05D004605 ORTHO05D005804 6.0e-27 124.0 75 70.7
MD17G1065700 Malus domestica HOM05D004605 ORTHO05D005804 7.9e-27 123.6 77 68.8
VMungo1383G2960 Vigna mungo HOM05D004605 ORTHO05D005804 7.9e-27 123.6 79 64.6
Haze_14382 Corylus avellana HOM05D004605 ORTHO05D005804 1.0e-26 123.2 80 65.0
Phvul.008G027000 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 1.0e-26 123.2 79 62.0
Phvul.008G027600 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 1.0e-26 123.2 79 62.0
MSTRG.15436 Avicennia marina HOM05D004605 ORTHO05D005804 2.3e-26 122.1 78 66.7
Duzib138G1714 Durio zibethinus HOM05D004605 ORTHO05D005804 3.0e-26 121.7 84 65.5
Prupe.3G249100 Prunus persica HOM05D004605 ORTHO05D005804 3.0e-26 121.7 73 67.1
CSS0024904 Camellia sinensis var. sinensis HOM05D004605 ORTHO05D005804 3.9e-26 121.3 74 66.2
TPR.G23408 Trifolium pratense HOM05D004605 ORTHO05D005804 3.9e-26 121.3 75 66.7
CARHR263630 Cardamine hirsuta HOM05D004605 ORTHO05D005804 5.1e-26 120.9 70 71.4
Ca_06902_v3 Cicer arietinum L. HOM05D004605 ORTHO05D005804 5.1e-26 120.9 75 68.0
ECA238G2860 Erigeron canadensis HOM05D004605 ORTHO05D005804 5.1e-26 120.9 79 65.8
VMungo1383G3490 Vigna mungo HOM05D004605 ORTHO05D005804 1.1e-25 119.8 80 60.0
FvH4_6g46390 Fragaria vesca HOM05D004605 ORTHO05D005804 1.5e-25 119.4 66 72.7
FAN02G3403 Fragaria x ananassa HOM05D004605 ORTHO05D005804 1.5e-25 119.4 66 72.7
FAN14G2038 Fragaria x ananassa HOM05D004605 ORTHO05D005804 1.5e-25 119.4 66 72.7
CiPaw.03G083100 Carya illinoinensis HOM05D004605 ORTHO05D005804 3.3e-25 118.2 66 72.7
MD09G1074300 Malus domestica HOM05D004605 ORTHO05D005804 3.3e-25 118.2 74 68.9
HPP92_012260 Vanilla planifolia HOM05D004605 ORTHO05D005804 3.3e-25 118.2 70 67.1
ATR0827G055 Amborella trichopoda HOM05D004605 ORTHO05D005804 4.3e-25 117.9 72 66.7
DCAR_021425 Daucus carota HOM05D004605 ORTHO05D005804 1.6e-24 115.9 77 64.9
Mapoly0001s0057 Marchantia polymorpha HOM05D004605 ORTHO05D005804 2.8e-24 115.2 75 66.7
FAN05G4053 Fragaria x ananassa HOM05D004605 ORTHO05D005804 6.2e-24 114.0 66 68.2
arahy.Tifrunner.gnm1.ann1.90K79T Arachis hypogaea HOM05D004605 ORTHO05D005804 1.8e-23 112.5 77 54.5
arahy.Tifrunner.gnm1.ann1.M6S7AL Arachis hypogaea HOM05D004605 ORTHO05D005804 1.8e-23 112.5 77 54.5
AagrBONN_evm.TU.Sc2ySwM_340.409 Anthoceros agrestis HOM05D004605 ORTHO05D005804 4.0e-23 111.3 75 57.3
RcHm_v2.0_Chr2g0164921 Rosa chinensis HOM05D004605 ORTHO05D005804 4.0e-23 111.3 66 65.2
SMO223G0030 Selaginella moellendorffii HOM05D004605 ORTHO05D005804 6.9e-23 110.5 66 66.7
Eucgr.B03744 Eucalyptus grandis HOM05D004605 ORTHO05D005804 1.2e-22 109.8 63 69.8
SEGI_21234 Sequoiadendron giganteum HOM05D004605 ORTHO05D005804 2.6e-22 108.6 76 55.3
Pp3c14_20450 Physcomitrium patens HOM05D004605 ORTHO05D005804 3.4e-22 108.2 66 65.2
Prupe.3G249000 Prunus persica HOM05D004605 ORTHO05D005804 7.6e-22 107.1 78 53.8
Eucgr.L00305 Eucalyptus grandis HOM05D004605 ORTHO05D005804 4.9e-21 104.4 63 66.7
Eucgr.L00721 Eucalyptus grandis HOM05D004605 ORTHO05D005804 8.4e-21 103.6 63 68.3
Eucgr.I02062 Eucalyptus grandis HOM05D004605 ORTHO05D005804 1.1e-20 103.2 108 48.1
BolC3t14639H Brassica oleracea HOM05D004605 ORTHO05D005804 3.2e-20 101.7 60 70.0
AUR62023160 Chenopodium quinoa HOM05D004605 ORTHO05D005804 3.0e-18 95.1 77 57.1
Cre12.g553700 Chlamydomonas reinhardtii HOM05D004605 ORTHO05D005804 3.9e-18 94.7 76 53.9
Nn1g08577 Nelumbo nucifera HOM05D004605 ORTHO05D005804 1.1e-15 86.7 55 67.3
RcHm_v2.0_Chr2g0164911 Rosa chinensis HOM05D004605 ORTHO05D005804 1.8e-15 85.9 66 51.5
Nn1g08580 Nelumbo nucifera HOM05D004605 ORTHO05D005804 2.6e-14 82.0 54 66.7
FvH4_6g46370 Fragaria vesca HOM05D004605 ORTHO05D005804 2.9e-13 78.6 66 47.0
FAN02G1482 Fragaria x ananassa HOM05D004605 ORTHO05D005804 5.0e-13 77.8 66 47.0
FAN09G3310 Fragaria x ananassa HOM05D004605 ORTHO05D005804 8.5e-13 77.0 66 45.5
QL02p036101 Quercus lobata HOM05D004605 ORTHO05D005804 8.5e-13 77.0 45 73.3
QL10p049039 Quercus lobata HOM05D004605 ORTHO05D005804 8.5e-13 77.0 45 73.3
FAN05G1095 Fragaria x ananassa HOM05D004605 ORTHO05D005804 1.1e-12 76.6 61 47.5
QL10p051328 Quercus lobata HOM05D004605 ORTHO05D005804 5.5e-12 74.3 45 68.9
arahy.Tifrunner.gnm1.ann1.XASR8W Arachis hypogaea HOM05D004605 ORTHO05D005804 1.8e-10 69.3 77 36.4
Cfa025436 Carpinus fangiana HOM05D004605 ORTHO05D005804 5.7e-09 64.3 69 43.5
SalBow3G1842 Salvia bowleyana HOM05D004605 ORTHO05D005804 3.7e-08 61.6 58 44.8
CBR_g36839 Chara braunii HOM05D004605 ORTHO05D005804 4.8e-08 61.2 74 36.5
Pp3s30_530 Physcomitrium patens HOM05D004605 ORTHO05D005804 1.2e-06 56.6 68 38.2
FAN09G1153 Fragaria x ananassa HOM05D004605 ORTHO05D005804 3.4e-06 55.1 47 53.2
SMO270G0021 Selaginella moellendorffii HOM05D004605 ORTHO05D005804 7.7e-06 53.9 67 35.8


User provided reference genes

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