Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO591G0183 Papaver somniferum HOM05D004197 ORTHO05D004975 1.7e-66 255.8 122 100.0
PSO832G1844 Papaver somniferum HOM05D004197 ORTHO05D004975 4.0e-63 244.6 122 95.1
PSO017G5565 Papaver somniferum HOM05D004197 ORTHO05D004975 5.7e-62 240.7 122 93.4
PSO675G0737 Papaver somniferum HOM05D004197 ORTHO05D004975 5.7e-62 240.7 122 93.4
Hma1.2p1_0307F.1_g119895 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 5.8e-54 214.2 119 84.0
Rhsim03G0176800 Rhododendron simsii HOM05D004197 ORTHO05D004975 1.3e-53 213.0 122 82.0
Oeu016610.1 Olea europaea HOM05D004197 ORTHO05D004975 1.7e-53 212.6 116 85.3
Gohir.A10G143100 Gossypium hirsutum HOM05D004197 ORTHO05D004975 2.2e-53 212.2 119 82.4
Gorai.011G136700 Gossypium raimondii HOM05D004197 ORTHO05D004975 2.2e-53 212.2 119 82.4
Gorai.012G053000 Gossypium raimondii HOM05D004197 ORTHO05D004975 2.2e-53 212.2 119 82.4
Duzib151G0052 Durio zibethinus HOM05D004197 ORTHO05D004975 2.9e-53 211.8 119 81.5
Gohir.D04G047600 Gossypium hirsutum HOM05D004197 ORTHO05D004975 3.7e-53 211.5 119 82.4
Duzib212G0574 Durio zibethinus HOM05D004197 ORTHO05D004975 4.9e-53 211.1 119 80.7
Gohir.A05G367700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 6.4e-53 210.7 119 81.5
Gohir.D10G123800 Gossypium hirsutum HOM05D004197 ORTHO05D004975 8.3e-53 210.3 119 81.5
Thecc.04G166300 Theobroma cacao HOM05D004197 ORTHO05D004975 8.3e-53 210.3 119 80.7
TWI32G1250 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 5.4e-52 207.6 119 80.7
CSS0039414 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 7.0e-52 207.2 119 79.8
CSS0047181 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 7.0e-52 207.2 119 79.8
Hund04335 Selenicereus undatus HOM05D004197 ORTHO05D004975 7.0e-52 207.2 118 78.8
Dinv33200 Davidia involucrata HOM05D004197 ORTHO05D004975 9.2e-52 206.8 120 80.0
CiPaw.11G096400 Carya illinoinensis HOM05D004197 ORTHO05D004975 1.2e-51 206.5 119 78.2
Atru.chr12.1293 Acer truncatum HOM05D004197 ORTHO05D004975 2.0e-51 205.7 119 78.2
Atru.chr4.2919 Acer truncatum HOM05D004197 ORTHO05D004975 3.5e-51 204.9 119 78.2
Cpa.g.sc10.180 Carica papaya HOM05D004197 ORTHO05D004975 3.5e-51 204.9 119 79.8
PGR142G4086 Punica granatum HOM05D004197 ORTHO05D004975 3.5e-51 204.9 114 84.2
Nn1g09691 Nelumbo nucifera HOM05D004197 ORTHO05D004975 4.6e-51 204.5 118 78.8
AL5G41720 Arabidopsis lyrata HOM05D004197 ORTHO05D004975 1.0e-50 203.4 119 78.2
Carub.0005s2637 Capsella rubella HOM05D004197 ORTHO05D004975 1.0e-50 203.4 119 78.2
Eucgr.G02225 Eucalyptus grandis HOM05D004197 ORTHO05D004975 1.0e-50 203.4 119 78.2
Manes.06G021100 Manihot esculenta HOM05D004197 ORTHO05D004975 1.0e-50 203.4 119 78.2
AT3G59650 Arabidopsis thaliana HOM05D004197 ORTHO05D004975 1.3e-50 203.0 119 77.3
CDE02G1869 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 1.3e-50 203.0 119 79.8
Cc02_g26370 Coffea canephora HOM05D004197 ORTHO05D004975 1.3e-50 203.0 118 79.7
Nitab4.5_0007872g0010 Nicotiana tabacum HOM05D004197 ORTHO05D004975 1.3e-50 203.0 118 80.5
GSVIVG01038138001 Vitis vinifera HOM05D004197 ORTHO05D004975 1.3e-50 203.0 114 82.5
MSTRG.27564 Avicennia marina HOM05D004197 ORTHO05D004975 1.7e-50 202.6 118 78.8
ATR0733G162 Amborella trichopoda HOM05D004197 ORTHO05D004975 2.3e-50 202.2 119 78.2
QL10p055721 Quercus lobata HOM05D004197 ORTHO05D004975 2.3e-50 202.2 119 80.7
arahy.Tifrunner.gnm1.ann1.4JR04K Arachis hypogaea HOM05D004197 ORTHO05D004975 3.0e-50 201.8 119 77.3
arahy.Tifrunner.gnm1.ann1.5DCW4K Arachis hypogaea HOM05D004197 ORTHO05D004975 3.0e-50 201.8 119 77.3
arahy.Tifrunner.gnm1.ann1.E9H45Q Arachis hypogaea HOM05D004197 ORTHO05D004975 3.0e-50 201.8 119 77.3
CAN.G525.23 Capsicum annuum HOM05D004197 ORTHO05D004975 3.0e-50 201.8 118 80.5
ECA247G1539 Erigeron canadensis HOM05D004197 ORTHO05D004975 3.0e-50 201.8 118 81.4
Potri.013G126200 Populus trichocarpa HOM05D004197 ORTHO05D004975 3.9e-50 201.4 119 77.3
CARHR170020 Cardamine hirsuta HOM05D004197 ORTHO05D004975 6.6e-50 200.7 119 76.5
ECA240G1468 Erigeron canadensis HOM05D004197 ORTHO05D004975 6.6e-50 200.7 116 81.0
Nitab4.5_0000902g0310 Nicotiana tabacum HOM05D004197 ORTHO05D004975 6.6e-50 200.7 118 79.7
Aa31LG10G13940 Aethionema arabicum HOM05D004197 ORTHO05D004975 8.6e-50 200.3 119 76.5
Glyma.17G164900 Glycine max HOM05D004197 ORTHO05D004975 1.1e-49 199.9 119 76.5
Aqoxy7G00569 Aquilegia oxysepala HOM05D004197 ORTHO05D004975 1.5e-49 199.5 119 78.2
Ciclev10022904m.g Citrus clementina HOM05D004197 ORTHO05D004975 1.5e-49 199.5 119 77.3
Prupe.1G206900 Prunus persica HOM05D004197 ORTHO05D004975 1.5e-49 199.5 119 78.2
SalBow6G6028 Salvia bowleyana HOM05D004197 ORTHO05D004975 1.5e-49 199.5 118 78.8
CiPaw.12G066300 Carya illinoinensis HOM05D004197 ORTHO05D004975 1.9e-49 199.1 119 75.6
AUR62023799 Chenopodium quinoa HOM05D004197 ORTHO05D004975 1.9e-49 199.1 118 76.3
HPP92_007604 Vanilla planifolia HOM05D004197 ORTHO05D004975 1.9e-49 199.1 119 76.5
HanXRQChr10g0286001 Helianthus annuus HOM05D004197 ORTHO05D004975 2.5e-49 198.7 118 79.7
Lsat_1_v5_gn_6_33001 Lactuca sativa HOM05D004197 ORTHO05D004975 2.5e-49 198.7 116 81.0
Peaxi162Scf00196g00222 Petunia axillaris HOM05D004197 ORTHO05D004975 2.5e-49 198.7 118 77.1
VMungo0251G3068 Vigna mungo HOM05D004197 ORTHO05D004975 2.5e-49 198.7 114 80.7
EL10Ac6g15364 Beta vulgaris HOM05D004197 ORTHO05D004975 3.3e-49 198.4 118 77.1
Ah.13g073520 Amaranthus hybridus HOM05D004197 ORTHO05D004975 4.3e-49 198.0 118 77.1
Cfa015042 Carpinus fangiana HOM05D004197 ORTHO05D004975 4.3e-49 198.0 119 75.6
Ca_23424_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 4.3e-49 198.0 119 78.2
Cc03_g14030 Coffea canephora HOM05D004197 ORTHO05D004975 4.3e-49 198.0 118 78.8
FAN01G1948 Fragaria x ananassa HOM05D004197 ORTHO05D004975 4.3e-49 198.0 119 79.8
FAN06G1493 Fragaria x ananassa HOM05D004197 ORTHO05D004975 4.3e-49 198.0 119 79.8
Lalb_Chr04g0253841 Lupinus albus HOM05D004197 ORTHO05D004975 4.3e-49 198.0 119 76.5
Psat1g223520 Pisum sativum HOM05D004197 ORTHO05D004975 4.3e-49 198.0 119 76.5
RcHm_v2.0_Chr1g0333831 Rosa chinensis HOM05D004197 ORTHO05D004975 4.3e-49 198.0 119 79.0
BcaC07g40496 Brassica carinata HOM05D004197 ORTHO05D004975 5.6e-49 197.6 119 75.6
A09p51920 Brassica napus HOM05D004197 ORTHO05D004975 5.6e-49 197.6 119 75.6
C08p34650 Brassica napus HOM05D004197 ORTHO05D004975 5.6e-49 197.6 119 75.6
BolC8t51067H Brassica oleracea HOM05D004197 ORTHO05D004975 5.6e-49 197.6 119 75.6
BraA09t40628Z Brassica rapa HOM05D004197 ORTHO05D004975 5.6e-49 197.6 119 75.6
BcaC08g44998 Brassica carinata HOM05D004197 ORTHO05D004975 7.3e-49 197.2 119 75.6
A07p24720 Brassica napus HOM05D000455 ORTHO05D000434 7.3e-49 197.2 119 75.6
C06p26290 Brassica napus HOM05D000455 ORTHO05D000434 7.3e-49 197.2 119 75.6
BolC6t37793H Brassica oleracea HOM05D004197 ORTHO05D004975 7.3e-49 197.2 119 75.6
BraA07t30117Z Brassica rapa HOM05D004197 ORTHO05D004975 7.3e-49 197.2 119 75.6
MELO3C017759.2 Cucumis melo HOM05D004197 ORTHO05D004975 7.3e-49 197.2 119 75.6
Migut.F01587 Erythranthe guttata HOM05D004197 ORTHO05D004975 7.3e-49 197.2 118 78.8
Sp5g03530 Schrenkiella parvula HOM05D004197 ORTHO05D004975 7.3e-49 197.2 119 75.6
TPR.G16667 Trifolium pratense HOM05D004197 ORTHO05D004975 7.3e-49 197.2 120 75.8
TWI34G1638 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 7.3e-49 197.2 143 69.2
BcaB02g07455 Brassica carinata HOM05D004197 ORTHO05D004975 9.5e-49 196.8 119 75.6
FAN03G3355 Fragaria x ananassa HOM05D004197 ORTHO05D004975 9.5e-49 196.8 119 79.0
FvH4_7g06200 Fragaria vesca HOM05D004197 ORTHO05D004975 1.2e-48 196.4 119 79.0
Thhalv10006316m.g Eutrema salsugineum HOM05D004197 ORTHO05D004975 1.6e-48 196.1 119 75.6
Solyc04g014390.3 Solanum lycopersicum HOM05D004197 ORTHO05D004975 1.6e-48 196.1 114 79.8
Sopen04g006520 Solanum pennellii HOM05D004197 ORTHO05D004975 1.6e-48 196.1 114 79.8
Phvul.003G238300 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 2.1e-48 195.7 114 78.9
Medtr8g022770 Medicago truncatula HOM05D004197 ORTHO05D004975 2.8e-48 195.3 119 76.5
Ca_10539_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 4.7e-48 194.5 119 75.6
Os03g0207250 Oryza sativa ssp. japonica HOM05D004197 ORTHO05D004975 4.7e-48 194.5 118 77.1
Lalb_Chr10g0101191 Lupinus albus HOM05D004197 ORTHO05D004975 1.1e-47 193.4 119 73.9
Glyma.05G102000 Glycine max HOM05D004197 ORTHO05D004975 1.4e-47 193.0 119 74.8
Lsat_1_v5_gn_5_190681 Lactuca sativa HOM05D004197 ORTHO05D004975 1.8e-47 192.6 116 78.4
CANSAT80G2644 Cannabis sativa HOM05D004197 ORTHO05D004975 2.3e-47 192.2 119 74.8
Sed0002539 Sechium edule HOM05D004197 ORTHO05D004975 2.3e-47 192.2 119 74.8
PGSC0003DMG401023624 Solanum tuberosum HOM05D004197 ORTHO05D004975 2.3e-47 192.2 114 78.9
Psat4g166320 Pisum sativum HOM05D004197 ORTHO05D004975 3.1e-47 191.8 118 73.7
THA.LOC104804007 Tarenaya hassleriana HOM05D004197 ORTHO05D004975 3.1e-47 191.8 118 73.7
unitig_899.g14470 Utricularia gibba HOM05D004197 ORTHO05D004975 3.1e-47 191.8 119 73.1
EL10Ac3g06082 Beta vulgaris HOM05D004197 ORTHO05D004975 4.0e-47 191.4 118 74.6
ClCG07G015230 Citrullus lanatus HOM05D004197 ORTHO05D004975 5.2e-47 191.0 119 76.5
Sp2g07880 Schrenkiella parvula HOM05D004197 ORTHO05D004975 6.8e-47 190.7 119 73.9
Zm00001eb400580 Zea mays HOM05D004197 ORTHO05D004975 8.9e-47 190.3 118 76.3
Lj1g0017974 Lotus japonicus HOM05D004197 ORTHO05D004975 1.5e-46 189.5 114 74.6
MD08G1230600 Malus domestica HOM05D004197 ORTHO05D004975 2.0e-46 189.1 116 75.9
TAR362G0244 Trochodendron aralioides HOM05D000090 ORTHO05D001584 2.6e-46 188.7 111 79.3
Phvul.010G124900 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 4.4e-46 188.0 111 77.5
Actinidia11444 Actinidia chinensis HOM05D005056 ORTHO05D006487 5.8e-46 187.6 110 78.2
CsaV3_4G002820 Cucumis sativus L. HOM05D004197 ORTHO05D004975 7.5e-46 187.2 119 72.3
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 9.8e-46 186.8 110 80.9
QL04p073242 Quercus lobata HOM05D004197 ORTHO05D004975 3.7e-45 184.9 119 72.3
TAR629G0957 Trochodendron aralioides HOM05D004197 ORTHO05D004975 3.7e-45 184.9 110 79.1
FAN24G1973 Fragaria x ananassa HOM05D004197 ORTHO05D004975 3.9e-42 174.9 110 77.3
FvH4_2g13530 Fragaria vesca HOM05D004197 ORTHO05D004975 8.6e-42 173.7 112 76.8
QL04p093649 Quercus lobata HOM05D004197 ORTHO05D004975 1.1e-41 173.3 115 72.2
SGA_v2.0_scaffold49G18240 Striga asiatica HOM05D004197 ORTHO05D004975 4.3e-41 171.4 110 73.6
TAR493G0004 Trochodendron aralioides HOM05D004197 ORTHO05D004975 4.0e-39 164.9 107 75.7
Mapoly0027s0066 Marchantia polymorpha HOM05D004197 ORTHO05D004975 5.2e-39 164.5 119 67.2
arahy.Tifrunner.gnm1.ann1.XY21PC Arachis hypogaea HOM05D004197 ORTHO05D004975 7.6e-38 160.6 130 60.0
AUR62002389 Chenopodium quinoa HOM05D004197 ORTHO05D004975 3.7e-37 158.3 211 42.7
Gorai.004G083000 Gossypium raimondii HOM05D004197 ORTHO05D004975 4.9e-37 157.9 94 77.7
Lj3g0000340 Lotus japonicus HOM05D004197 ORTHO05D004975 8.3e-37 157.1 123 64.2
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 8.3e-37 157.1 94 78.7
SEGI_18755 Sequoiadendron giganteum HOM05D004197 ORTHO05D004975 1.1e-36 156.8 118 60.2
C04p24770 Brassica napus HOM05D004197 ORTHO05D004975 1.9e-36 156.0 110 70.9
BolC4t23981H Brassica oleracea HOM05D004197 ORTHO05D004975 1.9e-36 156.0 110 70.9
Gohir.D08G078000 Gossypium hirsutum HOM05D004197 ORTHO05D004975 7.1e-36 154.1 92 78.3
BcaC02g10824 Brassica carinata HOM05D004197 ORTHO05D004975 1.6e-35 152.9 110 70.0
HanXRQChr09g0264591 Helianthus annuus HOM05D004197 ORTHO05D004975 2.7e-35 152.1 90 80.0
Gohir.D10G075200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 6.0e-35 151.0 90 77.8
Rhsim02G0084000 Rhododendron simsii HOM05D004197 ORTHO05D004975 7.8e-35 150.6 89 79.8
Sabra13G0105500 Salix brachista HOM05D004197 ORTHO05D004975 1.0e-34 150.2 168 49.4
Gohir.D02G135200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.7e-34 149.4 90 77.8
Pp3c1_20100 Physcomitrium patens HOM05D004197 ORTHO05D004975 3.0e-34 148.7 119 57.1
Atru.chr12.1301 Acer truncatum HOM05D004197 ORTHO05D004975 5.1e-34 147.9 90 73.3
Atru.chr12.1273 Acer truncatum HOM05D004197 ORTHO05D004975 1.1e-33 146.7 92 71.7
Gorai.005G151300 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.9e-33 146.0 90 75.6
Gorai.011G081000 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.9e-33 146.0 90 76.7
SHI24203 Sapria himalayana HOM05D004197 ORTHO05D004975 2.5e-33 145.6 133 52.6
Peaxi162Scf00474g00723 Petunia axillaris HOM05D004197 ORTHO05D004975 5.6e-33 144.4 118 60.2
arahy.Tifrunner.gnm1.ann1.60591L Arachis hypogaea HOM05D004197 ORTHO05D004975 6.2e-32 141.0 135 57.0
SalBow2G3321 Salvia bowleyana HOM05D004197 ORTHO05D004975 6.8e-31 137.5 85 76.5
unitig_736.g22525 Utricularia gibba HOM05D000398 ORTHO05D000551 6.8e-31 137.5 86 72.1
Zm00001eb007240 Zea mays HOM05D004197 ORTHO05D004975 2.0e-30 136.0 89 73.0
DCAR_029674 Daucus carota HOM05D004197 ORTHO05D004975 4.4e-30 134.8 89 71.9
DCAR_009572 Daucus carota HOM05D004197 ORTHO05D004975 2.2e-29 132.5 89 70.8
CARHR099320 Cardamine hirsuta HOM05D004197 ORTHO05D004975 5.4e-28 127.9 82 69.5
Gohir.D08G220700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.6e-27 126.3 77 77.9
TPR.G31074 Trifolium pratense HOM05D004197 ORTHO05D006502 2.1e-27 125.9 95 63.2
SMO347G0376 Selaginella moellendorffii HOM05D004197 ORTHO05D004975 6.6e-26 120.9 118 47.5
Lsat_1_v5_gn_6_23540 Lactuca sativa HOM05D004197 ORTHO05D004975 1.1e-25 120.2 95 64.2
Gorai.004G076200 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.1e-23 113.6 119 51.3
Cre06.g270650 Chlamydomonas reinhardtii HOM05D004197 ORTHO05D004975 5.3e-23 111.3 111 46.8
vmacro16589 Vaccinium macrocarpon HOM05D004197 ORTHO05D004975 6.9e-23 110.9 62 79.0
Hma1.2p1_0150F.1_g066800 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 9.0e-23 110.5 62 79.0
arahy.Tifrunner.gnm1.ann1.GGUP18 Arachis hypogaea HOM05D004197 ORTHO05D004975 3.4e-22 108.6 62 77.4
COL.COLO4_08144 Corchorus olitorius HOM05D004197 ORTHO05D004975 3.4e-22 108.6 62 79.0
Glyma.07G044001 Glycine max HOM05D004197 ORTHO05D004975 2.7e-19 99.0 90 57.8
Gohir.D04G172540 Gossypium hirsutum HOM05D004197 ORTHO05D004975 2.3e-18 95.9 60 75.0
Gorai.012G161800 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.1e-17 93.6 60 73.3
Lsat_1_v5_gn_2_131080 Lactuca sativa HOM05D004197 ORTHO05D004975 1.9e-17 92.8 82 61.0
arahy.Tifrunner.gnm1.ann1.HJ8Q1I Arachis hypogaea HOM05D004197 ORTHO05D004975 4.8e-16 88.2 56 67.9
MCO09G643 Micromonas commoda HOM05D004197 ORTHO05D004975 4.0e-15 85.1 117 35.9
Gorai.004G234500 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.2e-14 83.6 57 68.4
Actinidia27110 Actinidia chinensis HOM05D004197 ORTHO05D004975 1.6e-08 63.2 44 68.2
Thecc.10G088100 Theobroma cacao HOM05D004197 ORTHO05D004975 8.1e-08 60.8 41 68.3


User provided reference genes

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