Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO591G0110 Papaver somniferum HOM05D006074 ORTHO05D008728 8.6e-238 826.6 426 100.0
PSO832G2479 Papaver somniferum HOM05D006074 ORTHO05D008728 2.2e-225 785.4 426 95.1
TAR729G0002 Trochodendron aralioides HOM05D006074 ORTHO05D008728 1.9e-165 586.3 389 76.1
TAR622G0709 Trochodendron aralioides HOM05D006074 ORTHO05D008728 3.1e-163 578.9 367 79.0
MBI02_g10680_MAGBIO Magnolia biondii HOM05D006074 ORTHO05D008728 1.8e-155 553.1 388 70.9
Aqoxy3G03321 Aquilegia oxysepala HOM05D006074 ORTHO05D008728 1.2e-154 550.4 382 71.2
Prupe.3G270100 Prunus persica HOM05D006074 ORTHO05D008728 3.8e-153 545.4 354 75.4
QL02p081203 Quercus lobata HOM05D006074 ORTHO05D008728 6.1e-151 538.1 357 74.8
GSVIVG01011374001 Vitis vinifera HOM05D006074 ORTHO05D008728 6.1e-151 538.1 385 70.9
Sabra17G0072000 Salix brachista HOM05D006074 ORTHO05D008728 1.8e-150 536.6 373 71.8
Actinidia02708 Actinidia chinensis HOM05D006074 ORTHO05D008728 2.3e-150 536.2 374 72.7
CSS0024892 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 3.9e-150 535.4 381 70.9
Potri.017G080300 Populus trichocarpa HOM05D006074 ORTHO05D008728 2.6e-149 532.7 373 70.8
ATR0564G024 Amborella trichopoda HOM05D006074 ORTHO05D008728 7.4e-149 531.2 375 71.2
Lju41C23G10 Lonicera japonica HOM05D006074 ORTHO05D008728 4.8e-148 528.5 380 71.8
CSS0026498 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 1.8e-147 526.6 381 70.6
CiPaw.03G029000 Carya illinoinensis HOM05D006074 ORTHO05D008728 1.8e-147 526.6 381 70.6
FAN02G2663 Fragaria x ananassa HOM05D006074 ORTHO05D008728 2.4e-147 526.2 392 68.6
Duzib187G1598 Durio zibethinus HOM05D006074 ORTHO05D008728 7.0e-147 524.6 365 72.3
MD09G1048800 Malus domestica HOM05D006074 ORTHO05D008728 2.6e-146 522.7 359 71.0
Thecc.04G099800 Theobroma cacao HOM05D006074 ORTHO05D008728 2.6e-146 522.7 410 66.6
Hma1.2p1_0449F.1_g155300 Hydrangea macrophylla HOM05D006074 ORTHO05D008728 4.5e-146 521.9 369 71.8
FvH4_6g49080 Fragaria vesca HOM05D006074 ORTHO05D008728 1.3e-145 520.4 375 70.1
RcHm_v2.0_Chr2g0168871 Rosa chinensis HOM05D006074 ORTHO05D008728 1.7e-145 520.0 412 66.5
Psat1g075640 Pisum sativum HOM05D006074 ORTHO05D008728 3.8e-145 518.8 379 70.4
Medtr1g039990 Medicago truncatula HOM05D006074 ORTHO05D008728 6.5e-145 518.1 357 72.8
Rhsim08G0067900 Rhododendron simsii HOM05D006074 ORTHO05D008728 6.5e-145 518.1 411 65.9
Oeu060929.1 Olea europaea HOM05D006074 ORTHO05D008728 7.2e-144 514.6 367 72.2
vmacro18203 Vaccinium macrocarpon HOM05D006074 ORTHO05D008728 1.2e-143 513.8 382 69.1
Lj2g0007765 Lotus japonicus HOM05D006074 ORTHO05D008728 4.7e-143 511.9 382 68.6
ClCG10G014940 Citrullus lanatus HOM05D006074 ORTHO05D008728 6.1e-143 511.5 365 70.7
CsaV3_3G041590 Cucumis sativus L. HOM05D006074 ORTHO05D008728 1.4e-142 510.4 365 71.0
Lsat_1_v5_gn_4_177200 Lactuca sativa HOM05D006074 ORTHO05D008728 3.9e-142 508.8 402 65.2
CANSAT64G1183 Cannabis sativa HOM05D006074 ORTHO05D008728 8.8e-142 507.7 359 70.8
Phvul.004G027100 Phaseolus vulgaris HOM05D006074 ORTHO05D008728 8.8e-142 507.7 360 71.7
Nn4g23084 Nelumbo nucifera HOM05D006074 ORTHO05D008728 1.5e-141 506.9 357 70.9
PGR083G0972 Punica granatum HOM05D006074 ORTHO05D008728 1.5e-141 506.9 373 68.9
MELO3C009883.2 Cucumis melo HOM05D006074 ORTHO05D008728 2.6e-141 506.1 361 70.6
BcaC06g30896 Brassica carinata HOM05D006074 ORTHO05D008728 4.4e-141 505.4 367 67.8
Lalb_Chr21g0318901 Lupinus albus HOM05D006074 ORTHO05D008728 1.3e-140 503.8 362 69.3
CAN.G579.8 Capsicum annuum HOM05D006074 ORTHO05D008728 2.2e-140 503.1 377 68.2
Sopen03g012680 Solanum pennellii HOM05D006074 ORTHO05D008728 3.7e-140 502.3 359 69.4
PGSC0003DMG400009217 Solanum tuberosum HOM05D006074 ORTHO05D008728 4.8e-140 501.9 359 69.4
CANSAT64G2140 Cannabis sativa HOM05D006074 ORTHO05D008728 6.3e-140 501.5 359 70.5
Sp2g17410 Schrenkiella parvula HOM05D006074 ORTHO05D008728 8.2e-140 501.1 354 69.2
Aa31LG2G4460 Aethionema arabicum HOM05D006074 ORTHO05D008728 1.8e-139 500.0 356 69.4
Cpa.g.sc14.19 Carica papaya HOM05D006074 ORTHO05D008728 3.1e-139 499.2 473 58.6
Gohir.A07G215200 Gossypium hirsutum HOM05D006074 ORTHO05D008728 4.1e-139 498.8 366 68.6
Solyc03g058860.3 Solanum lycopersicum HOM05D006074 ORTHO05D008728 5.3e-139 498.4 359 68.8
arahy.Tifrunner.gnm1.ann1.V4TPJI Arachis hypogaea HOM05D006074 ORTHO05D008728 7.0e-139 498.0 369 67.5
VMungo0464G0585 Vigna mungo HOM05D006074 ORTHO05D008728 7.0e-139 498.0 343 72.3
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 9.1e-139 497.7 354 68.9
COL.COLO4_36112 Corchorus olitorius HOM05D006074 ORTHO05D008728 1.2e-138 497.3 344 73.3
Gorai.001G256400 Gossypium raimondii HOM05D006074 ORTHO05D008728 2.6e-138 496.1 398 64.1
Migut.H00904 Erythranthe guttata HOM05D006074 ORTHO05D008728 4.5e-138 495.4 356 70.2
BolC7t44287H Brassica oleracea HOM05D006074 ORTHO05D008728 5.9e-138 495.0 354 68.6
Eucgr.J01218 Eucalyptus grandis HOM05D006074 ORTHO05D008728 5.9e-138 495.0 433 61.9
TWI34G1337 Tripterygium wilfordii HOM05D006074 ORTHO05D008728 5.9e-138 495.0 375 65.9
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 7.7e-138 494.6 383 64.2
BraA06t26953Z Brassica rapa HOM05D006074 ORTHO05D008728 7.7e-138 494.6 383 64.2
arahy.Tifrunner.gnm1.ann1.1Y4ZQN Arachis hypogaea HOM05D006074 ORTHO05D008728 1.7e-137 493.4 359 68.5
BcaC06g33639 Brassica carinata HOM05D006074 ORTHO05D008728 1.7e-137 493.4 354 68.4
HanXRQChr09g0265461 Helianthus annuus HOM05D006074 ORTHO05D008728 2.9e-137 492.7 383 66.1
Atru.BG.207.p Acer truncatum HOM05D006074 ORTHO05D008728 3.8e-137 492.3 352 70.5
CSS0037615 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 8.5e-137 491.1 383 65.8
Carub.0005s0731 Capsella rubella HOM05D006074 ORTHO05D008728 1.1e-136 490.7 366 67.5
AUR62038861 Chenopodium quinoa HOM05D006074 ORTHO05D008728 1.5e-136 490.3 382 66.8
CSS0026374 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 1.9e-136 490.0 363 69.1
Sed0009974 Sechium edule HOM05D006074 ORTHO05D008728 1.9e-136 490.0 360 66.9
AUR62031615 Chenopodium quinoa HOM05D006074 ORTHO05D008728 3.2e-136 489.2 382 66.8
AT3G28760 Arabidopsis thaliana HOM05D006074 ORTHO05D008728 4.2e-136 488.8 354 68.1
EL10Ac2g02949 Beta vulgaris HOM05D006074 ORTHO05D008728 5.5e-136 488.4 362 68.0
Sc14g0005980 Simmondsia chinensis HOM05D006074 ORTHO05D008728 1.2e-135 487.3 357 69.2
SalBow1G4287 Salvia bowleyana HOM05D006074 ORTHO05D008728 6.1e-135 485.0 367 66.5
AL5G18490 Arabidopsis lyrata HOM05D006074 ORTHO05D008728 1.0e-134 484.2 358 67.6
THA.LOC104823933 Tarenaya hassleriana HOM05D006074 ORTHO05D008728 1.0e-134 484.2 388 65.2
Dinv33738 Davidia involucrata HOM05D006074 ORTHO05D008728 2.3e-134 483.0 386 63.7
Gohir.D07G222100 Gossypium hirsutum HOM05D006074 ORTHO05D008728 4.4e-133 478.8 366 66.7
Cc07_g03180 Coffea canephora HOM05D006074 ORTHO05D008728 1.3e-132 477.2 370 67.8
ECA232G4667 Erigeron canadensis HOM05D006074 ORTHO05D008728 2.2e-132 476.5 348 69.5
DCAR_021653 Daucus carota HOM05D006074 ORTHO05D008728 3.1e-131 472.6 361 65.9
Hund15626 Selenicereus undatus HOM05D006074 ORTHO05D008728 7.7e-130 468.0 361 68.4
Os03g0170300 Oryza sativa ssp. japonica HOM05D006074 ORTHO05D008728 1.7e-129 466.8 372 64.8
Nitab4.5_0000002g0350 Nicotiana tabacum HOM05D006074 ORTHO05D008728 5.5e-128 461.8 338 69.2
Nitab4.5_0003081g0050 Nicotiana tabacum HOM05D006074 ORTHO05D008728 2.7e-127 459.5 338 69.5
Zm00001eb402270 Zea mays HOM05D006074 ORTHO05D008728 8.8e-126 454.5 355 65.9
TPR.G10370 Trifolium pratense HOM05D006074 ORTHO05D008728 2.6e-125 453.0 316 71.5
Glyma.19G020800 Glycine max HOM05D006074 ORTHO05D008728 2.8e-124 449.5 369 62.9
Peaxi162Scf00451g00822 Petunia axillaris HOM05D006074 ORTHO05D008728 1.0e-121 441.0 379 62.8
Ca_04272_v3 Cicer arietinum L. HOM05D006074 ORTHO05D008728 1.5e-120 437.2 323 68.4
SGA_v2.0_scaffold59G20672 Striga asiatica HOM05D006074 ORTHO05D008728 5.7e-117 425.2 318 66.7
Manes.15G177000 Manihot esculenta HOM05D006074 ORTHO05D008728 1.7e-116 423.7 276 73.9
Thhalv10004593m.g Eutrema salsugineum HOM05D006074 ORTHO05D008728 4.5e-114 415.6 322 65.5
Pp3c9_19570 Physcomitrium patens HOM05D006074 ORTHO05D008728 8.6e-105 384.8 375 52.5
AagrBONN_evm.TU.Sc2ySwM_228.462 Anthoceros agrestis HOM05D006074 ORTHO05D008728 1.1e-104 384.4 366 54.4
Pp3c10_1080 Physcomitrium patens HOM05D006074 ORTHO05D008728 4.4e-101 372.5 359 53.8
Mapoly0005s0075 Marchantia polymorpha HOM05D006074 ORTHO05D008728 4.7e-95 352.4 372 50.3
FAN14G0759 Fragaria x ananassa HOM05D006074 ORTHO05D008728 5.8e-85 318.9 416 47.8
unitig_21.g20922 Utricularia gibba HOM05D006074 ORTHO05D008728 2.9e-84 316.6 252 60.3
CDE02G2631 Ceratophyllum demersum HOM05D006074 ORTHO05D008728 1.9e-83 313.9 256 62.1
Glyma.13G064100 Glycine max HOM05D006074 ORTHO05D008728 2.7e-82 310.1 260 65.0
Pp3c15_19890 Physcomitrium patens HOM05D006074 ORTHO05D008728 6.0e-82 308.9 363 47.7
Ciclev10012867m.g Citrus clementina HOM05D006074 ORTHO05D008728 3.6e-79 299.7 188 79.3
SEGI_14685 Sequoiadendron giganteum HOM05D006074 ORTHO05D008728 2.0e-69 267.3 184 68.5
Lsat_1_v5_gn_4_177220 Lactuca sativa HOM05D006074 ORTHO05D008728 3.8e-68 263.1 187 72.2
MCO08G127 Micromonas commoda HOM05D006074 ORTHO05D008728 9.3e-67 258.5 367 43.1
Pp3c1_20750 Physcomitrium patens HOM05D006074 ORTHO05D020966 2.7e-66 256.9 412 37.9
Pp3c1_20753 Physcomitrium patens HOM05D006074 ORTHO05D020966 2.7e-66 256.9 412 37.9
Pp3c2_18540 Physcomitrium patens HOM05D006074 ORTHO05D020966 7.4e-64 248.8 412 35.9
Cre05.g248250 Chlamydomonas reinhardtii HOM05D006074 ORTHO05D008728 7.4e-56 222.2 345 42.0
CARHR151760 Cardamine hirsuta HOM05D006074 ORTHO05D008728 1.3e-55 221.5 207 54.1
Pp3c10_2120 Physcomitrium patens HOM05D006074 ORTHO05D020966 6.9e-54 215.7 518 30.1
PRCOL_00003957 Prasinoderma coloniale HOM05D006074 ORTHO05D008728 1.3e-47 194.9 366 36.1
Haze_18216 Corylus avellana HOM05D000132 ORTHO05D000058 4.6e-42 176.4 156 59.6
Lsat_1_v5_gn_0_26800 Lactuca sativa HOM05D006074 ORTHO05D008728 1.4e-38 164.9 162 50.0
Lsat_1_v5_gn_3_53141 Lactuca sativa HOM05D006074 ORTHO05D008728 4.2e-35 153.3 151 49.7
Atru.chr3.96 Acer truncatum HOM05D006074 ORTHO05D026256 6.5e-20 102.8 71 66.2
Sabra17G0081400 Salix brachista HOM05D006074 ORTHO05D008728 3.2e-19 100.5 71 73.2
CDE02G1972 Ceratophyllum demersum HOM05D006074 ORTHO05D026256 7.5e-16 89.4 71 60.6
Pp3c20_4730 Physcomitrium patens HOM05D006074 ORTHO05D026055 7.5e-16 89.4 170 36.5
Actinidia17537 Actinidia chinensis HOM05D006074 ORTHO05D026256 3.7e-15 87.0 71 62.0
Pp3c8_20190 Physcomitrium patens HOM05D006074 ORTHO05D026055 3.7e-15 87.0 173 31.2
PGSC0003DMG400013970 Solanum tuberosum HOM05D006074 ORTHO05D008728 1.8e-14 84.7 61 59.0
Pp3c23_20410 Physcomitrium patens HOM05D006074 ORTHO05D026055 9.1e-14 82.4 160 35.0
Pp3c20_10280 Physcomitrium patens HOM05D006074 ORTHO05D026055 7.7e-13 79.3 189 28.0
HanXRQChr09g0253281 Helianthus annuus HOM05D006074 ORTHO05D008728 2.7e-10 70.9 53 69.8


User provided reference genes

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