Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO591G0105 Papaver somniferum HOM05D009820 ORTHO05D011171 2.0e-74 282.3 144 100.0
PSO832G1700 Papaver somniferum HOM05D009820 ORTHO05D011171 2.8e-68 261.9 144 93.8
Sabra01G0049200 Salix brachista HOM05D009820 ORTHO05D011171 3.3e-16 89.0 82 57.3
GSVIVG01001118001 Vitis vinifera HOM05D004039 ORTHO05D011171 7.3e-16 87.8 87 55.2
Potri.001G070200 Populus trichocarpa HOM05D009820 ORTHO05D011171 9.6e-16 87.4 96 50.0
Dinv14392 Davidia involucrata HOM05D009820 ORTHO05D011171 4.8e-15 85.1 86 52.3
TAR374G1519 Trochodendron aralioides HOM05D009820 ORTHO05D011171 8.1e-15 84.3 81 55.6
Nn3g16210 Nelumbo nucifera HOM05D000742 ORTHO05D011171 1.1e-14 84.0 90 51.1
Aqoxy271s004 Aquilegia oxysepala HOM05D000742 ORTHO05D011171 9.0e-14 80.9 82 56.1
Aqoxy5G02999 Aquilegia oxysepala HOM05D000742 ORTHO05D011171 9.0e-14 80.9 82 56.1
Nn3g16209 Nelumbo nucifera HOM05D000742 ORTHO05D011171 4.5e-13 78.6 82 58.5
FvH4_4g22220 Fragaria vesca HOM05D009820 ORTHO05D011171 1.3e-12 77.0 103 42.7
FAN12G0969 Fragaria x ananassa HOM05D009820 ORTHO05D011171 1.3e-12 77.0 103 42.7
FAN12G3761 Fragaria x ananassa HOM05D009820 ORTHO05D011171 1.3e-12 77.0 103 42.7
RcHm_v2.0_Chr4g0428451 Rosa chinensis HOM05D009820 ORTHO05D011171 4.9e-12 75.1 81 53.1
Atru.chr12.1466 Acer truncatum HOM05D009820 ORTHO05D011171 8.4e-12 74.3 130 36.9
FAN17G1765 Fragaria x ananassa HOM05D009820 ORTHO05D011171 8.4e-12 74.3 103 41.7
Atru.chr12.1461 Acer truncatum HOM05D009820 ORTHO05D011171 1.4e-11 73.6 130 36.2
FAN07G1429 Fragaria x ananassa HOM05D009820 ORTHO05D011171 1.4e-11 73.6 103 40.8
CDE06G0636 Ceratophyllum demersum HOM05D009820 ORTHO05D011171 2.4e-11 72.8 104 41.3
MBI07_g42008_MAGBIO Magnolia biondii HOM05D000742 ORTHO05D011171 4.2e-11 72.0 106 40.6
Prupe.1G211900 Prunus persica HOM05D009820 ORTHO05D011171 4.2e-11 72.0 100 41.0
PGR119G0868 Punica granatum HOM05D009820 ORTHO05D011171 7.1e-11 71.2 86 41.9
Manes.08G099600 Manihot esculenta HOM05D009820 ORTHO05D011171 2.1e-10 69.7 79 48.1
CDE02G3752 Ceratophyllum demersum HOM05D000742 ORTHO05D011171 4.6e-10 68.6 81 45.7
Gohir.D02G176500 Gossypium hirsutum HOM05D009820 ORTHO05D011171 1.0e-09 67.4 93 48.4
Gorai.005G198200 Gossypium raimondii HOM05D009820 ORTHO05D011171 1.3e-09 67.0 93 48.4
Eucgr.J01652 Eucalyptus grandis HOM05D009820 ORTHO05D011171 2.3e-09 66.2 79 44.3
Gohir.A03G153600 Gossypium hirsutum HOM05D009820 ORTHO05D011171 2.3e-09 66.2 93 48.4
Thecc.02G188800 Theobroma cacao HOM05D009820 ORTHO05D011171 6.7e-09 64.7 92 46.7
HPP92_023044 Vanilla planifolia HOM05D043096 ORTHO05D011171 3.3e-08 62.4 105 36.2
Migut.L01317 Erythranthe guttata HOM05D000742 ORTHO05D003741 4.3e-08 62.0 76 43.4
ATR0564G409 Amborella trichopoda HOM05D000742 ORTHO05D003741 2.8e-07 59.3 78 44.9
Medtr7g010100 Medicago truncatula HOM05D000742 ORTHO05D003741 6.2e-07 58.2 117 32.5
Psat3g196400 Pisum sativum HOM05D000742 ORTHO05D003741 1.4e-06 57.0 117 35.0
SEGI_34196 Sequoiadendron giganteum HOM05D000742 ORTHO05D003741 1.4e-06 57.0 86 38.4
CANSAT25G0662 Cannabis sativa HOM05D009820 ORTHO05D011171 1.8e-06 56.6 71 47.9
Cpa.g.sc14.16 Carica papaya HOM05D000742 ORTHO05D003741 2.4e-06 56.2 78 42.3
MBI02_g33380_MAGBIO Magnolia biondii HOM05D000742 ORTHO05D003741 2.4e-06 56.2 78 41.0
Pp3c23_20750 Physcomitrium patens HOM05D000742 ORTHO05D000924 4.0e-06 55.5 76 39.5
vmacro05717 Vaccinium macrocarpon HOM05D000742 ORTHO05D003741 6.9e-06 54.7 78 42.3
Ca_02742_v3 Cicer arietinum L. HOM05D000742 ORTHO05D003741 9.0e-06 54.3 78 41.0


User provided reference genes

Program Settings