Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO591G0040 Papaver somniferum HOM05D002318 ORTHO05D008744 2.0e-178 629.0 322 100.0
TAR622G0636 Trochodendron aralioides HOM05D002318 ORTHO05D004713 4.8e-92 342.0 259 70.3
Aqoxy3G03551 Aquilegia oxysepala HOM05D002318 ORTHO05D008744 5.9e-90 335.1 263 67.7
Atru.chr11.1690 Acer truncatum HOM05D002318 ORTHO05D008744 2.4e-83 313.2 262 64.1
Haze_11934 Corylus avellana HOM05D002318 ORTHO05D008744 5.4e-83 312.0 264 62.9
Nn3g17371 Nelumbo nucifera HOM05D002318 ORTHO05D008744 1.7e-81 307.0 262 63.7
Cfa008908 Carpinus fangiana HOM05D002318 ORTHO05D008744 6.5e-81 305.1 262 62.2
QL03p070830 Quercus lobata HOM05D002318 ORTHO05D008744 1.1e-80 304.3 264 62.9
Sc11g0002270 Simmondsia chinensis HOM05D002318 ORTHO05D008744 7.2e-80 301.6 262 60.7
MBI16_g06774_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D008744 1.6e-79 300.4 262 65.6
Thecc.02G336500 Theobroma cacao HOM05D002318 ORTHO05D008744 1.6e-79 300.4 262 60.3
Potri.010G161600 Populus trichocarpa HOM05D002318 ORTHO05D008744 2.7e-79 299.7 262 61.1
GSVIVG01012177001 Vitis vinifera HOM05D002318 ORTHO05D008744 6.1e-79 298.5 262 62.6
COL.COLO4_27936 Corchorus olitorius HOM05D002318 ORTHO05D008744 8.0e-79 298.1 263 60.5
Dinv34114 Davidia involucrata HOM05D002318 ORTHO05D008744 1.4e-78 297.4 262 61.8
PGR119G0925 Punica granatum HOM05D002318 ORTHO05D008744 3.0e-78 296.2 264 59.8
Manes.01G030400 Manihot esculenta HOM05D002318 ORTHO05D008744 8.8e-78 294.7 262 63.0
Hund05860 Selenicereus undatus HOM05D002318 ORTHO05D008744 3.4e-77 292.7 258 60.5
Prupe.1G282000 Prunus persica HOM05D002318 ORTHO05D008744 5.7e-77 292.0 262 61.8
Sabra10G0122900 Salix brachista HOM05D002318 ORTHO05D008744 2.8e-76 289.7 262 60.3
CiPaw.05G128000 Carya illinoinensis HOM05D002318 ORTHO05D008744 4.9e-76 288.9 262 61.8
TWI75G0802 Tripterygium wilfordii HOM05D002318 ORTHO05D008744 4.9e-76 288.9 262 58.8
MD16G1064900 Malus domestica HOM05D002318 ORTHO05D008744 6.3e-76 288.5 262 61.8
Cpa.g.sc1.87 Carica papaya HOM05D002318 ORTHO05D008744 8.3e-76 288.1 263 61.2
AUR62043182 Chenopodium quinoa HOM05D002318 ORTHO05D008744 1.4e-75 287.3 262 58.0
RcHm_v2.0_Chr4g0438871 Rosa chinensis HOM05D002318 ORTHO05D008744 4.1e-75 285.8 262 60.3
Sed0004708 Sechium edule HOM05D002318 ORTHO05D008744 9.2e-75 284.6 235 62.1
Hma1.2p1_0354F.1_g133650 Hydrangea macrophylla HOM05D002318 ORTHO05D008744 2.0e-74 283.5 262 58.8
Ciclev10032054m.g Citrus clementina HOM05D002318 ORTHO05D008744 2.7e-74 283.1 262 59.9
Glyma.02G113500 Glycine max HOM05D002318 ORTHO05D008744 3.5e-74 282.7 226 66.8
CsaV3_6G032440 Cucumis sativus L. HOM05D002318 ORTHO05D008744 4.5e-74 282.3 262 57.3
Ah.13g073950 Amaranthus hybridus HOM05D002318 ORTHO05D008744 1.0e-73 281.2 284 54.2
Phvul.002G069400 Phaseolus vulgaris HOM05D002318 ORTHO05D008744 1.7e-73 280.4 226 64.2
FvH4_4g30500 Fragaria vesca HOM05D002318 ORTHO05D008744 2.3e-73 280.0 262 59.9
arahy.Tifrunner.gnm1.ann1.T0481B Arachis hypogaea HOM05D002318 ORTHO05D008744 2.9e-73 279.6 228 65.8
arahy.Tifrunner.gnm1.ann1.T5ZGHX Arachis hypogaea HOM05D002318 ORTHO05D008744 2.9e-73 279.6 228 65.8
MELO3C011434.2 Cucumis melo HOM05D002318 ORTHO05D008744 6.6e-73 278.5 262 56.9
Aa31LG2G7170 Aethionema arabicum HOM05D002318 ORTHO05D008744 8.6e-73 278.1 291 55.7
FAN07G2980 Fragaria x ananassa HOM05D002318 ORTHO05D004713 8.6e-73 278.1 263 59.3
THA.LOC104805183 Tarenaya hassleriana HOM05D002318 ORTHO05D008744 1.1e-72 277.7 267 58.8
Duzib268G0798 Durio zibethinus HOM05D002318 ORTHO05D008744 1.9e-72 276.9 263 56.7
Gorai.013G091200 Gossypium raimondii HOM05D002318 ORTHO05D008744 2.5e-72 276.6 263 56.7
Gohir.A13G079900 Gossypium hirsutum HOM05D002318 ORTHO05D008744 4.3e-72 275.8 263 57.0
Eucgr.G02464 Eucalyptus grandis HOM05D002318 ORTHO05D008744 7.3e-72 275.0 258 56.6
FAN17G2010 Fragaria x ananassa HOM05D002318 ORTHO05D008744 7.3e-72 275.0 262 59.2
Lalb_Chr17g0340981 Lupinus albus HOM05D002318 ORTHO05D008744 7.3e-72 275.0 226 63.7
TPR.G22412 Trifolium pratense HOM05D002318 ORTHO05D008744 7.3e-72 275.0 263 58.6
VMungo1215G2584 Vigna mungo HOM05D002318 ORTHO05D008744 7.3e-72 275.0 229 63.8
CANSAT54G0184 Cannabis sativa HOM05D002318 ORTHO05D008744 3.6e-71 272.7 192 70.8
Lj2g0021077 Lotus japonicus HOM05D002318 ORTHO05D008744 6.1e-71 271.9 262 56.9
FAN22G0051 Fragaria x ananassa HOM05D002318 ORTHO05D008744 8.0e-71 271.6 262 58.8
Psat2g128360 Pisum sativum HOM05D002318 ORTHO05D008744 1.4e-70 270.8 263 57.8
ATR0111G011 Amborella trichopoda HOM05D002318 ORTHO05D008744 8.9e-70 268.1 237 63.7
EL10As3g23350 Beta vulgaris HOM05D002318 ORTHO05D008744 2.0e-69 266.9 293 51.2
Ca_04907_v3 Cicer arietinum L. HOM05D002318 ORTHO05D008744 4.4e-69 265.8 262 56.9
Cc11_g12380 Coffea canephora HOM05D002318 ORTHO05D008744 4.4e-69 265.8 262 55.3
ClCG08G010240 Citrullus lanatus HOM05D002318 ORTHO05D008744 5.7e-69 265.4 274 52.9
Oeu021096.1 Olea europaea HOM05D002318 ORTHO05D008744 2.2e-68 263.5 262 56.1
CARHR145730 Cardamine hirsuta HOM05D002318 ORTHO05D008744 1.1e-67 261.2 263 58.2
CDE04G0061 Ceratophyllum demersum HOM05D002318 ORTHO05D008744 1.1e-67 261.2 235 59.6
BcaC06g31184 Brassica carinata HOM05D002318 ORTHO05D008744 1.4e-67 260.8 206 68.0
BcaC06g34000 Brassica carinata HOM05D002318 ORTHO05D008744 1.4e-67 260.8 222 63.5
HanXRQChr12g0362851 Helianthus annuus HOM05D002318 ORTHO05D008744 1.4e-67 260.8 262 56.1
Sopen05g007450 Solanum pennellii HOM05D002318 ORTHO05D008744 1.4e-67 260.8 262 55.3
CAN.G1340.13 Capsicum annuum HOM05D002318 ORTHO05D008744 7.0e-67 258.5 263 55.9
AL5G13100 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 9.2e-67 258.1 269 55.4
AL5G13140 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 9.2e-67 258.1 269 55.4
A06p43150 Brassica napus HOM05D002318 ORTHO05D008744 1.2e-66 257.7 223 63.7
C07p33850 Brassica napus HOM05D002318 ORTHO05D008744 1.2e-66 257.7 223 63.7
Nitab4.5_0000334g0260 Nicotiana tabacum HOM05D002318 ORTHO05D008744 1.2e-66 257.7 197 67.0
Rhsim12G0076700 Rhododendron simsii HOM05D002318 ORTHO05D008744 1.6e-66 257.3 251 56.6
Sp2g14310 Schrenkiella parvula HOM05D002318 ORTHO05D008744 1.6e-66 257.3 224 62.9
BolC7t43899H Brassica oleracea HOM05D002318 ORTHO05D008744 3.5e-66 256.1 223 63.2
BraA06t27203Z Brassica rapa HOM05D002318 ORTHO05D008744 3.5e-66 256.1 223 63.2
Migut.L01223 Erythranthe guttata HOM05D002318 ORTHO05D008744 3.5e-66 256.1 253 54.9
Thhalv10004578m.g Eutrema salsugineum HOM05D002318 ORTHO05D008744 3.5e-66 256.1 264 56.8
Actinidia19922 Actinidia chinensis HOM05D002318 ORTHO05D008744 4.6e-66 255.8 262 54.2
CSS0013540 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 4.6e-66 255.8 176 72.7
Carub.0005s0236 Capsella rubella HOM05D002318 ORTHO05D008744 1.0e-65 254.6 243 57.6
PGSC0003DMG401028329 Solanum tuberosum HOM05D002318 ORTHO05D008744 1.3e-65 254.2 262 54.2
PGSC0003DMG402022110 Solanum tuberosum HOM05D002318 ORTHO05D008744 1.3e-65 254.2 262 54.2
FAN12G0082 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.7e-65 253.8 262 56.9
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 2.3e-65 253.4 260 54.2
AUR62038089 Chenopodium quinoa HOM05D002318 ORTHO05D008744 1.1e-64 251.1 262 53.4
Solyc05g012620.4 Solanum lycopersicum HOM05D002318 ORTHO05D008744 1.9e-64 250.4 197 64.5
AT2G03390 Arabidopsis thaliana HOM05D002318 ORTHO05D008744 3.3e-64 249.6 270 55.2
Os08g0172200 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 2.8e-63 246.5 215 61.4
DCAR_027449 Daucus carota HOM05D002318 ORTHO05D008744 8.0e-63 245.0 197 64.0
unitig_22.g6902 Utricularia gibba HOM05D002318 ORTHO05D008744 2.3e-62 243.4 255 54.5
ECA233G4874 Erigeron canadensis HOM05D002318 ORTHO05D008744 3.1e-62 243.0 263 52.5
SEGI_16280 Sequoiadendron giganteum HOM05D002318 ORTHO05D008744 2.0e-61 240.4 175 68.0
vmacro01330 Vaccinium macrocarpon HOM05D002318 ORTHO05D008744 9.8e-61 238.0 249 53.4
Gohir.D13G079700 Gossypium hirsutum HOM05D002318 ORTHO05D008744 1.7e-60 237.3 263 51.0
Peaxi162Scf00314g00023 Petunia axillaris HOM05D002318 ORTHO05D008744 3.7e-60 236.1 303 48.2
Medtr5g043480 Medicago truncatula HOM05D002318 ORTHO05D008744 4.1e-59 232.6 263 52.5
SalBow2G2755 Salvia bowleyana HOM05D002318 ORTHO05D008744 1.7e-57 227.3 253 49.8
Mapoly0001s0530 Marchantia polymorpha HOM05D002318 ORTHO05D008744 2.3e-54 216.9 215 55.3
arahy.Tifrunner.gnm1.ann1.1U2S5X Arachis hypogaea HOM05D002318 ORTHO05D008744 5.2e-54 215.7 191 62.8
arahy.Tifrunner.gnm1.ann1.TF58FW Arachis hypogaea HOM05D002318 ORTHO05D008744 6.8e-54 215.3 191 63.4
Dinv16705 Davidia involucrata HOM05D002318 ORTHO05D004713 4.4e-53 212.6 143 76.2
CSS0007300 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 1.3e-52 211.1 213 56.3
Glyma.01G055000 Glycine max HOM05D002318 ORTHO05D008744 1.3e-52 211.1 190 62.6
Pp3c7_3960 Physcomitrium patens HOM05D002318 ORTHO05D008744 1.1e-48 198.0 179 55.9
Lj6C782T15 Lonicera japonica HOM05D002318 ORTHO05D008744 7.3e-48 195.3 269 45.4
FAN16G1553 Fragaria x ananassa HOM05D002318 ORTHO05D008744 8.9e-46 188.3 128 72.7
CBR_g27967 Chara braunii HOM05D002318 ORTHO05D008744 2.2e-44 183.7 185 51.9
AagrBONN_evm.TU.Sc2ySwM_117.1985 Anthoceros agrestis HOM05D002318 ORTHO05D008744 1.1e-43 181.4 185 50.8
Zm00001eb370310 Zea mays HOM05D002318 ORTHO05D008744 1.7e-41 174.1 161 60.2
SGA_v2.0_scaffold16G07752 Striga asiatica HOM05D002318 ORTHO05D008744 1.1e-40 171.4 193 47.7
SMO115G0105 Selaginella moellendorffii HOM05D002318 ORTHO05D008744 3.6e-39 166.4 146 58.9
Aa31sc734G30 Aethionema arabicum HOM05D002318 ORTHO05D008744 1.9e-32 144.1 209 48.3
Cre02.g113700 Chlamydomonas reinhardtii HOM05D002318 ORTHO05D008744 2.4e-27 127.1 188 40.4
PRCOL_00000845 Prasinoderma coloniale HOM05D002318 ORTHO05D008744 1.8e-25 120.9 235 34.5
Actinidia31948 Actinidia chinensis HOM05D002318 ORTHO05D008744 8.7e-25 118.6 197 38.1
CSS0032009 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 6.0e-10 69.3 157 30.6
arahy.Tifrunner.gnm1.ann1.QV9UMR Arachis hypogaea HOM05D000001 ORTHO05D000003 5.1e-09 66.2 37 75.7
Lsat_1_v5_gn_5_151580 Lactuca sativa HOM05D002318 ORTHO05D008744 1.5e-08 64.7 55 61.8
CBR_g50304 Chara braunii HOM05D020303 ORTHO05D021299 1.6e-07 61.2 98 34.7


User provided reference genes

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