Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO585G0039 Papaver somniferum HOM05D006079 ORTHO05D008156 3.2e-253 877.9 421 100.0
PSO384G3626 Papaver somniferum HOM05D006079 ORTHO05D008156 3.8e-246 854.4 421 97.1
Manes.08G086700 Manihot esculenta HOM05D006079 ORTHO05D008156 2.7e-191 672.2 427 74.7
Nn2g13580 Nelumbo nucifera HOM05D006079 ORTHO05D008156 8.6e-190 667.2 422 74.4
CiPaw.10G153700 Carya illinoinensis HOM05D006079 ORTHO05D008156 2.3e-182 642.5 429 71.8
Gorai.012G110900 Gossypium raimondii HOM05D006079 ORTHO05D008156 3.9e-182 641.7 427 71.2
Haze_20934 Corylus avellana HOM05D006079 ORTHO05D008156 1.1e-181 640.2 434 71.0
Duzib093G0682 Durio zibethinus HOM05D006079 ORTHO05D008156 3.3e-181 638.6 425 71.3
Cfa017268 Carpinus fangiana HOM05D006079 ORTHO05D008156 5.6e-181 637.9 430 71.4
Gohir.A04G087500 Gossypium hirsutum HOM05D006079 ORTHO05D008156 7.3e-181 637.5 430 71.2
QL07p036333 Quercus lobata HOM05D006079 ORTHO05D008156 7.3e-181 637.5 437 71.4
Atru.chr8.2129 Acer truncatum HOM05D006079 ORTHO05D008156 9.5e-181 637.1 431 71.5
CSS0045639 Camellia sinensis var. sinensis HOM05D006079 ORTHO05D008156 7.5e-178 627.5 430 70.0
COL.COLO4_14632 Corchorus olitorius HOM05D006079 ORTHO05D008156 7.5e-178 627.5 427 70.7
TWI77G0608 Tripterygium wilfordii HOM05D006079 ORTHO05D008156 7.5e-178 627.5 426 70.7
Dinv35521 Davidia involucrata HOM05D006079 ORTHO05D008156 1.7e-177 626.3 431 70.1
Gohir.D04G127900 Gossypium hirsutum HOM05D006079 ORTHO05D008156 3.7e-177 625.2 427 70.3
Thecc.05G024000 Theobroma cacao HOM05D006079 ORTHO05D008156 8.3e-177 624.0 427 70.3
Prupe.6G269000 Prunus persica HOM05D006079 ORTHO05D008156 4.1e-176 621.7 428 70.1
Sabra06G0073200 Salix brachista HOM05D006079 ORTHO05D008156 1.6e-175 619.8 427 70.0
GSVIVG01034026001 Vitis vinifera HOM05D006079 ORTHO05D008156 2.7e-175 619.0 415 71.1
Actinidia13795 Actinidia chinensis HOM05D006079 ORTHO05D008156 4.6e-175 618.2 434 68.9
FAN14G2872 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.7e-174 616.3 413 70.5
FvH4_6g12250 Fragaria vesca HOM05D006079 ORTHO05D008156 2.3e-174 615.9 413 70.2
FAN02G2404 Fragaria x ananassa HOM05D006079 ORTHO05D008156 3.9e-174 615.1 413 70.5
RcHm_v2.0_Chr3g0464051 Rosa chinensis HOM05D006079 ORTHO05D008156 5.0e-174 614.8 413 70.9
MD12G1158600 Malus domestica HOM05D006079 ORTHO05D008156 8.6e-174 614.0 429 69.0
Duzib128G0993 Durio zibethinus HOM05D006079 ORTHO05D008156 1.5e-173 613.2 427 68.1
Glyma.07G143100 Glycine max HOM05D006079 ORTHO05D008156 2.5e-173 612.5 413 70.7
FAN09G0680 Fragaria x ananassa HOM05D006079 ORTHO05D008156 4.3e-173 611.7 413 70.0
Psat3g135200 Pisum sativum HOM05D006079 ORTHO05D008156 4.3e-173 611.7 431 67.7
FAN05G0163 Fragaria x ananassa HOM05D006079 ORTHO05D008156 5.6e-173 611.3 413 70.2
PGR031G3170 Punica granatum HOM05D006079 ORTHO05D008156 7.3e-173 610.9 433 68.6
Lalb_Chr01g0022871 Lupinus albus HOM05D006079 ORTHO05D008156 9.5e-173 610.5 430 69.3
Cpa.g.sc56.97 Carica papaya HOM05D006079 ORTHO05D008156 1.2e-172 610.1 413 70.0
CANSAT35G1087 Cannabis sativa HOM05D006079 ORTHO05D008156 2.3e-171 605.9 413 70.7
TAR633G1690 Trochodendron aralioides HOM05D006079 ORTHO05D008156 3.1e-171 605.5 434 68.4
Lj1g0026135 Lotus japonicus HOM05D006079 ORTHO05D008156 5.2e-171 604.7 436 68.1
Potri.006G095400 Populus trichocarpa HOM05D006079 ORTHO05D008156 8.9e-171 604.0 427 68.9
Ciclev10011790m.g Citrus clementina HOM05D006079 ORTHO05D008156 3.4e-170 602.1 416 70.0
Ca_09158_v3 Cicer arietinum L. HOM05D006079 ORTHO05D008156 1.3e-169 600.1 430 67.7
Eucgr.B02761 Eucalyptus grandis HOM05D006079 ORTHO05D008156 1.3e-166 590.1 428 66.8
Lj2A83T75 Lonicera japonica HOM05D006079 ORTHO05D008156 1.3e-166 590.1 406 70.4
Aqoxy1G00752 Aquilegia oxysepala HOM05D006079 ORTHO05D008156 1.7e-166 589.7 426 68.5
MELO3C003219.2 Cucumis melo HOM05D006079 ORTHO05D008156 1.7e-166 589.7 428 66.8
CsaV3_4G025930 Cucumis sativus L. HOM05D006079 ORTHO05D008156 2.3e-166 589.3 428 67.1
Sed0002088 Sechium edule HOM05D006079 ORTHO05D008156 6.6e-166 587.8 422 66.6
arahy.Tifrunner.gnm1.ann1.3KU04F Arachis hypogaea HOM05D006079 ORTHO05D008156 8.6e-166 587.4 424 67.9
Solyc09g011880.3 Solanum lycopersicum HOM05D006079 ORTHO05D008156 2.5e-165 585.9 414 67.9
Sopen09g006700 Solanum pennellii HOM05D006079 ORTHO05D008156 3.3e-165 585.5 414 67.6
Medtr7g066250 Medicago truncatula HOM05D006079 ORTHO05D008156 7.3e-165 584.3 430 66.5
ECA236G0495 Erigeron canadensis HOM05D006079 ORTHO05D008156 9.5e-165 583.9 427 65.1
Peaxi162Scf01352g00015 Petunia axillaris HOM05D006079 ORTHO05D008156 9.5e-165 583.9 416 66.1
PGSC0003DMG400020333 Solanum tuberosum HOM05D006079 ORTHO05D008156 1.2e-164 583.6 414 67.4
ClCG04G007320 Citrullus lanatus HOM05D006079 ORTHO05D008156 1.8e-163 579.7 428 65.7
Nitab4.5_0007539g0010 Nicotiana tabacum HOM05D006079 ORTHO05D008156 2.4e-163 579.3 434 64.5
Sc25g0003370 Simmondsia chinensis HOM05D006079 ORTHO05D008156 2.4e-163 579.3 431 65.7
Phvul.008G111400 Phaseolus vulgaris HOM05D006079 ORTHO05D008156 4.0e-163 578.6 418 66.7
Migut.J00236 Erythranthe guttata HOM05D006079 ORTHO05D008156 5.2e-163 578.2 424 65.6
Nitab4.5_0000008g0510 Nicotiana tabacum HOM05D006079 ORTHO05D008156 6.8e-163 577.8 431 64.5
MSTRG.5605 Avicennia marina HOM05D006079 ORTHO05D008156 2.6e-162 575.9 425 65.6
arahy.Tifrunner.gnm1.ann1.GZPT0A Arachis hypogaea HOM05D006079 ORTHO05D008156 7.6e-162 574.3 448 64.1
HanXRQChr04g0124711 Helianthus annuus HOM05D006079 ORTHO05D008156 5.4e-160 568.2 415 66.0
Cc06_g01790 Coffea canephora HOM05D006079 ORTHO05D008156 6.0e-159 564.7 435 64.4
SGA_v2.0_scaffold85G26780 Striga asiatica HOM05D006079 ORTHO05D008156 7.8e-159 564.3 428 62.6
Aa31LG5G23170 Aethionema arabicum HOM05D006079 ORTHO05D008156 6.6e-158 561.2 423 64.8
BcaB02g09226 Brassica carinata HOM05D006079 ORTHO05D008156 1.1e-157 560.5 424 63.2
AT2G38000 Arabidopsis thaliana HOM05D006079 ORTHO05D008156 6.2e-156 554.7 414 63.5
BcaC02g11943 Brassica carinata HOM05D006079 ORTHO05D008156 8.1e-156 554.3 424 62.5
BolC4t22573H Brassica oleracea HOM05D006079 ORTHO05D008156 1.8e-155 553.1 415 63.4
Thhalv10016725m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 1.8e-155 553.1 424 62.7
THA.LOC104823390 Tarenaya hassleriana HOM05D006079 ORTHO05D008156 2.4e-155 552.7 423 63.6
CARHR132560 Cardamine hirsuta HOM05D006079 ORTHO05D008156 3.1e-155 552.4 426 61.7
AL4G34980 Arabidopsis lyrata HOM05D006079 ORTHO05D008156 2.0e-154 549.7 414 63.5
BraA05t19766Z Brassica rapa HOM05D006079 ORTHO05D008156 2.2e-153 546.2 414 61.8
A05p08000 Brassica napus HOM05D006079 ORTHO05D008156 3.8e-153 545.4 425 61.9
MBI05_g36624_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 5.4e-152 541.6 329 76.3
Actinidia29142 Actinidia chinensis HOM05D006079 ORTHO05D008156 2.1e-151 539.7 422 64.2
Rhsim05G0203500 Rhododendron simsii HOM05D006079 ORTHO05D008156 2.1e-151 539.7 355 71.5
HPP92_006654 Vanilla planifolia HOM05D006079 ORTHO05D008156 4.6e-151 538.5 425 60.7
BcaB02g09227 Brassica carinata HOM05D006079 ORTHO05D008156 1.7e-150 536.6 424 61.3
Carub.0004s1997 Capsella rubella HOM05D006079 ORTHO05D008156 3.3e-149 532.3 425 60.7
DCAR_024040 Daucus carota HOM05D006079 ORTHO05D008156 3.3e-149 532.3 458 59.2
Oeu015011.1 Olea europaea HOM05D006079 ORTHO05D008156 3.3e-149 532.3 407 66.1
Sp4g20320 Schrenkiella parvula HOM05D006079 ORTHO05D008156 5.6e-149 531.6 423 60.0
Ah.11g045330 Amaranthus hybridus HOM05D006079 ORTHO05D008156 2.1e-148 529.6 413 62.5
AUR62041356 Chenopodium quinoa HOM05D006079 ORTHO05D008156 4.2e-144 515.4 390 63.6
CDE04G0224 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 3.5e-143 512.3 412 61.2
Zm00001eb169630 Zea mays HOM05D006079 ORTHO05D008156 3.5e-143 512.3 401 61.8
vmacro20226 Vaccinium macrocarpon HOM05D006079 ORTHO05D008156 6.0e-143 511.5 439 59.0
ATR0618G129 Amborella trichopoda HOM05D006079 ORTHO05D008156 7.9e-143 511.1 410 60.7
VMungo1383G1007 Vigna mungo HOM05D006079 ORTHO05D008156 1.9e-141 506.5 384 65.1
C04p09660 Brassica napus HOM05D006079 ORTHO05D008156 2.1e-140 503.1 399 61.4
Os05g0316200 Oryza sativa ssp. japonica HOM05D006079 ORTHO05D008156 4.8e-140 501.9 404 61.9
EL10Ac5g11535 Beta vulgaris HOM05D006079 ORTHO05D008156 4.0e-139 498.8 434 57.8
Lsat_1_v5_gn_8_82341 Lactuca sativa HOM05D006079 ORTHO05D008156 5.8e-138 495.0 396 63.6
unitig_26.g9105 Utricularia gibba HOM05D006079 ORTHO05D008156 1.9e-136 490.0 418 57.9
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla HOM05D006079 ORTHO05D008156 6.7e-134 481.5 427 58.8
Gohir.A13G086740 Gossypium hirsutum HOM05D006079 ORTHO05D008156 2.6e-130 469.5 425 55.8
SEGI_08405 Sequoiadendron giganteum HOM05D006079 ORTHO05D008156 6.9e-123 444.9 326 65.6
CDE07G0746 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 2.4e-115 419.9 422 52.6
TPR.G29287 Trifolium pratense HOM05D006079 ORTHO05D008156 8.5e-113 411.4 263 72.6
AagrBONN_evm.TU.Sc2ySwM_117.3694 Anthoceros agrestis HOM05D006079 ORTHO05D008156 3.9e-102 375.9 400 49.2
CAN.G338.65 Capsicum annuum HOM05D006079 ORTHO05D008156 2.1e-95 353.6 286 59.8
Mapoly0040s0094 Marchantia polymorpha HOM05D006079 ORTHO05D008156 7.5e-93 345.1 422 43.1
BcaC02g11941 Brassica carinata HOM05D006079 ORTHO05D008156 1.1e-91 341.3 218 69.7
Migut.J00237 Erythranthe guttata HOM05D006079 ORTHO05D008156 3.1e-91 339.7 378 49.5
HPP92_006629 Vanilla planifolia HOM05D006079 ORTHO05D008156 2.9e-89 333.2 301 54.5
SMO172G0100 Selaginella moellendorffii HOM05D006079 ORTHO05D008156 1.0e-86 324.7 320 51.6
Pp3c16_16710 Physcomitrium patens HOM05D006079 ORTHO05D008156 2.0e-82 310.5 392 42.3
Gohir.D13G085200 Gossypium hirsutum HOM05D006079 ORTHO05D008156 6.1e-71 272.3 197 67.0
CAN.G686.13 Capsicum annuum HOM05D006079 ORTHO05D008156 5.6e-56 222.6 130 80.8
Gohir.A01G178136 Gossypium hirsutum HOM05D006079 ORTHO05D008156 9.5e-56 221.9 171 63.7
Lsat_1_v5_gn_5_162881 Lactuca sativa HOM05D006079 ORTHO05D008156 1.1e-51 208.4 135 70.4
Thhalv10017300m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 1.7e-49 201.1 222 46.8
MD04G1144700 Malus domestica HOM05D006079 ORTHO05D008156 1.1e-46 191.8 155 61.3
QL07p036284 Quercus lobata HOM05D006079 ORTHO05D338014 4.2e-35 153.3 103 72.8
Gorai.006G157700 Gossypium raimondii HOM05D006079 ORTHO05D008156 7.1e-35 152.5 125 61.6
Gohir.D09G137350 Gossypium hirsutum HOM05D006079 ORTHO05D008156 4.6e-34 149.8 125 60.8
Cc02_g12960 Coffea canephora HOM05D006079 ORTHO05D008156 4.3e-32 143.3 112 66.1
TAR636G2503 Trochodendron aralioides HOM05D006079 ORTHO05D008156 4.0e-30 136.7 82 79.3
MD04G1144600 Malus domestica HOM05D006079 ORTHO05D032748 3.9e-25 120.2 92 58.7
TPR.G34865 Trifolium pratense HOM05D006079 ORTHO05D008156 7.1e-19 99.4 111 50.5
MBI05_g36625_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 3.5e-18 97.1 95 55.8
BraA05t21464Z Brassica rapa HOM05D006079 ORTHO05D032748 8.4e-12 75.9 54 57.4
BcaC04g24204 Brassica carinata HOM05D006079 ORTHO05D032748 1.6e-07 61.6 53 50.9


User provided reference genes

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