Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO573G0016 Papaver somniferum HOM05D005998 ORTHO05D007664 7.1e-102 374.0 199 100.0
PSO017G5443 Papaver somniferum HOM05D005998 ORTHO05D007664 8.5e-63 244.2 174 80.5
PSO837G0060 Papaver somniferum HOM05D005998 ORTHO05D007664 4.8e-42 175.3 185 62.7
PSO017G0196 Papaver somniferum HOM05D005998 ORTHO05D007664 4.5e-40 168.7 188 56.4
PSO675G7594 Papaver somniferum HOM05D005998 ORTHO05D007664 2.0e-35 153.3 191 56.0
PSO541G3130 Papaver somniferum HOM05D005998 ORTHO05D007664 2.6e-35 152.9 185 56.8
PSO837G0015 Papaver somniferum HOM05D005998 ORTHO05D007664 4.4e-35 152.1 188 58.0
PSO675G5104 Papaver somniferum HOM05D005998 ORTHO05D007664 3.1e-33 146.0 187 54.0
PSO541G0922 Papaver somniferum HOM05D005998 ORTHO05D007664 1.0e-28 131.0 167 57.5
PSO017G2859 Papaver somniferum HOM05D005998 ORTHO05D007664 1.4e-28 130.6 170 54.7
PSO017G6716 Papaver somniferum HOM05D005998 ORTHO05D007664 1.3e-26 124.0 210 46.2
PSO218G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 3.7e-26 122.5 189 49.2
PSO340G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 3.7e-26 122.5 189 49.2
PSO675G6053 Papaver somniferum HOM05D005998 ORTHO05D007664 3.7e-26 122.5 189 49.2
PSO675G6885 Papaver somniferum HOM05D005998 ORTHO05D007664 3.7e-26 122.5 189 49.2
PSO675G8174 Papaver somniferum HOM05D005998 ORTHO05D007664 7.0e-25 118.2 189 49.2
PSO017G3521 Papaver somniferum HOM05D005998 ORTHO05D007664 6.6e-23 111.7 215 42.3
PSO017G3446 Papaver somniferum HOM05D005998 ORTHO05D007664 1.5e-22 110.5 142 47.2
PSO837G0002 Papaver somniferum HOM05D005998 ORTHO05D007664 3.3e-22 109.4 134 46.3
PSO017G5922 Papaver somniferum HOM05D005998 ORTHO05D007664 3.0e-20 102.8 127 56.7
PSO017G7319 Papaver somniferum HOM05D005998 ORTHO05D007664 7.5e-19 98.2 79 62.0
PSO170G1012 Papaver somniferum HOM05D005998 ORTHO05D007664 1.3e-18 97.4 162 50.6
Sc05g0001600 Simmondsia chinensis HOM05D005998 ORTHO05D007664 8.3e-18 94.7 201 31.8
HanXRQChr10g0281201 Helianthus annuus HOM05D005998 ORTHO05D007664 4.1e-17 92.4 204 35.8
PSO017G6639 Papaver somniferum HOM05D005998 ORTHO05D007664 4.1e-17 92.4 206 39.3
PSO573G0021 Papaver somniferum HOM05D005998 ORTHO05D007664 2.0e-16 90.1 204 37.3
ECA236G1847 Erigeron canadensis HOM05D005998 ORTHO05D007664 3.5e-16 89.4 204 30.4
PSO017G0268 Papaver somniferum HOM05D005998 ORTHO05D007664 1.5e-14 84.0 286 32.2
PSO017G7250 Papaver somniferum HOM05D005998 ORTHO05D007664 1.5e-14 84.0 162 45.1
EL10Ac5g10571 Beta vulgaris HOM05D005998 ORTHO05D007664 6.2e-13 78.6 202 30.7
Lj2A1109T75 Lonicera japonica HOM05D005998 ORTHO05D007664 6.2e-13 78.6 204 38.7
QL09p045684 Quercus lobata HOM05D005998 ORTHO05D007664 8.9e-12 74.7 204 36.8
Aa31LG5G18090 Aethionema arabicum HOM05D005998 ORTHO05D007664 1.2e-11 74.3 204 35.8
RcHm_v2.0_Chr5g0064201 Rosa chinensis HOM05D005998 ORTHO05D007664 2.6e-11 73.2 155 40.6
PSO017G0278 Papaver somniferum HOM05D000500 ORTHO05D007664 3.4e-11 72.8 75 52.0
PSO017G2023 Papaver somniferum HOM05D005998 ORTHO05D007664 4.4e-11 72.4 204 37.7
Cc02_g30680 Coffea canephora HOM05D005998 ORTHO05D007664 5.8e-11 72.0 136 44.9
Gohir.A11G144800 Gossypium hirsutum HOM05D005998 ORTHO05D007664 1.3e-10 70.9 204 35.8
PSO017G4719 Papaver somniferum HOM05D005998 ORTHO05D007664 1.7e-10 70.5 81 45.7
Prupe.8G184400 Prunus persica HOM05D005998 ORTHO05D007664 2.2e-10 70.1 204 34.8
Actinidia23131 Actinidia chinensis HOM05D005998 ORTHO05D007664 3.7e-10 69.3 203 34.5
BraA05t22797Z Brassica rapa HOM05D005998 ORTHO05D007664 4.9e-10 68.9 205 25.9
COL.COLO4_29925 Corchorus olitorius HOM05D005998 ORTHO05D007664 4.9e-10 68.9 203 36.5
CANSAT25G0419 Cannabis sativa HOM05D005998 ORTHO05D007664 1.1e-09 67.8 204 33.8
Rhsim13G0055600 Rhododendron simsii HOM05D005998 ORTHO05D007664 1.1e-09 67.8 187 28.3
A05p40660 Brassica napus HOM05D005998 ORTHO05D007664 1.9e-09 67.0 205 24.9
TWI75G0247 Tripterygium wilfordii HOM05D005998 ORTHO05D007664 2.4e-09 66.6 208 36.1
Dinv28780 Davidia involucrata HOM05D005998 ORTHO05D003775 3.2e-09 66.2 98 36.7
PSO017G7049 Papaver somniferum HOM05D005998 ORTHO05D007664 3.2e-09 66.2 85 42.4
Sp3g06470 Schrenkiella parvula HOM05D005998 ORTHO05D007664 3.2e-09 66.2 204 33.8
Gohir.D11G153100 Gossypium hirsutum HOM05D005998 ORTHO05D007664 4.1e-09 65.9 186 37.6
Gorai.007G162000 Gossypium raimondii HOM05D005998 ORTHO05D007664 4.1e-09 65.9 186 37.6
CSS0043446 Camellia sinensis var. sinensis HOM05D005998 ORTHO05D007664 9.2e-09 64.7 204 34.3
PSO573G0042 Papaver somniferum HOM05D005998 ORTHO05D007664 1.2e-08 64.3 204 36.3
Thhalv10020882m.g Eutrema salsugineum HOM05D005998 ORTHO05D007664 2.0e-08 63.5 204 33.3
RcHm_v2.0_Chr6g0281791 Rosa chinensis HOM05D005998 ORTHO05D007664 3.5e-08 62.8 202 35.1
RcHm_v2.0_Chr7g0205731 Rosa chinensis HOM05D005998 ORTHO05D007664 3.5e-08 62.8 145 29.7
CARHR082230 Cardamine hirsuta HOM05D005998 ORTHO05D007664 4.6e-08 62.4 154 39.0
DCAR_000509 Daucus carota HOM05D005998 ORTHO05D007664 6.0e-08 62.0 145 39.3
MD05G1151800 Malus domestica HOM05D005998 ORTHO05D007664 7.8e-08 61.6 105 50.5
Atru.chr6.3489 Acer truncatum HOM05D005998 ORTHO05D007664 1.0e-07 61.2 203 33.5
PGR083G1807 Punica granatum HOM05D005998 ORTHO05D007664 1.7e-07 60.5 204 33.8
Lsat_1_v5_gn_8_98580 Lactuca sativa HOM05D005998 ORTHO05D007664 2.3e-07 60.1 91 37.4
PSO573G0035 Papaver somniferum HOM05D005998 ORTHO05D007664 2.3e-07 60.1 66 48.5
Lj3g0009731 Lotus japonicus HOM05D005998 ORTHO05D007664 5.0e-07 58.9 90 37.8
Cfa010674 Carpinus fangiana HOM05D005998 ORTHO05D007664 6.6e-07 58.5 152 38.8
FvH4_2g17281 Fragaria vesca HOM05D005998 ORTHO05D007664 8.6e-07 58.2 130 42.3
Ciclev10015543m.g Citrus clementina HOM05D005998 ORTHO05D007664 1.9e-06 57.0 204 32.8
PSO017G6055 Papaver somniferum HOM05D005998 ORTHO05D007664 1.9e-06 57.0 84 41.7
CDE08G0319 Ceratophyllum demersum HOM05D005998 ORTHO05D007664 2.5e-06 56.6 139 37.4
PGSC0003DMG400020641 Solanum tuberosum HOM05D005998 ORTHO05D007664 2.5e-06 56.6 204 32.8


User provided reference genes

Program Settings