Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO572G0003 Papaver somniferum HOM05D007479 ORTHO05D009416 5.8e-98 360.9 185 100.0
PSO832G0938 Papaver somniferum HOM05D007479 ORTHO05D009416 5.8e-98 360.9 185 100.0
PSO832G2794 Papaver somniferum HOM05D007479 ORTHO05D009416 5.8e-98 360.9 185 100.0
PSO210G3923 Papaver somniferum HOM05D007479 ORTHO05D009416 4.9e-89 331.3 185 91.9
TAR362G0341 Trochodendron aralioides HOM05D007479 ORTHO05D009416 1.3e-44 183.7 137 71.5
TWI59G0977 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 3.7e-44 182.2 166 61.4
TWI59G1446 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 3.7e-44 182.2 166 61.4
Aqoxy2G03133 Aquilegia oxysepala HOM05D007479 ORTHO05D009416 6.9e-43 177.9 125 74.4
CSS0010600 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 2.6e-42 176.0 148 67.6
CSS0014944 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 2.6e-42 176.0 148 67.6
GSVIVG01011009001 Vitis vinifera HOM05D007479 ORTHO05D009416 5.9e-42 174.9 122 73.8
Thecc.01G290200 Theobroma cacao HOM05D007479 ORTHO05D009416 1.7e-41 173.3 107 81.3
Atru.chr5.1282 Acer truncatum HOM05D007479 ORTHO05D009416 3.8e-41 172.2 149 62.4
Cpa.g.sc9.160 Carica papaya HOM05D007479 ORTHO05D009416 3.8e-41 172.2 189 53.4
Duzib133G1271 Durio zibethinus HOM05D007479 ORTHO05D009416 1.9e-40 169.9 174 54.6
MBI19_g32765_MAGBIO Magnolia biondii HOM05D007479 ORTHO05D009416 7.2e-40 167.9 118 73.7
QL12p023941 Quercus lobata HOM05D007479 ORTHO05D009416 7.2e-40 167.9 121 69.4
Gohir.D08G080200 Gossypium hirsutum HOM05D007479 ORTHO05D009416 9.4e-40 167.5 106 76.4
Gorai.004G085300 Gossypium raimondii HOM05D007479 ORTHO05D009416 9.4e-40 167.5 106 76.4
COL.COLO4_08032 Corchorus olitorius HOM05D007479 ORTHO05D009416 1.2e-39 167.2 107 76.6
Manes.01G213600 Manihot esculenta HOM05D007479 ORTHO05D009416 1.6e-39 166.8 127 67.7
Cfa006037 Carpinus fangiana HOM05D007479 ORTHO05D009416 2.7e-39 166.0 119 71.4
CiPaw.07G099900 Carya illinoinensis HOM05D007479 ORTHO05D009416 2.7e-39 166.0 110 74.5
Phvul.001G201900 Phaseolus vulgaris HOM05D007479 ORTHO05D009416 2.7e-39 166.0 109 75.2
Sabra14G0101000 Salix brachista HOM05D007479 ORTHO05D009416 3.6e-39 165.6 106 77.4
VMungo1383G0484 Vigna mungo HOM05D007479 ORTHO05D009416 3.6e-39 165.6 109 75.2
MD00G1056400 Malus domestica HOM05D007479 ORTHO05D009416 4.6e-39 165.2 124 71.8
Medtr7g107680 Medicago truncatula HOM05D007479 ORTHO05D009416 4.6e-39 165.2 128 64.1
Ca_09112_v3 Cicer arietinum L. HOM05D000335 ORTHO05D001251 7.9e-39 164.5 106 75.5
CSS0048836 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 1.0e-38 164.1 149 65.1
RcHm_v2.0_Chr6g0292541 Rosa chinensis HOM05D007479 ORTHO05D009416 1.0e-38 164.1 116 70.7
Ciclev10022531m.g Citrus clementina HOM05D007479 ORTHO05D009416 1.8e-38 163.3 164 57.9
FAN24G3263 Fragaria x ananassa HOM05D000112 ORTHO05D000564 1.8e-38 163.3 114 71.1
CANSAT25G0138 Cannabis sativa HOM05D007479 ORTHO05D009416 2.3e-38 162.9 159 56.0
Prupe.8G252200 Prunus persica HOM05D007479 ORTHO05D009416 3.0e-38 162.5 106 76.4
Lj1g0024237 Lotus japonicus HOM05D007479 ORTHO05D009416 3.9e-38 162.2 109 73.4
Gohir.A08G072000 Gossypium hirsutum HOM05D007479 ORTHO05D009416 5.1e-38 161.8 115 70.4
EL10Ac7g17366 Beta vulgaris HOM05D007479 ORTHO05D009416 6.7e-38 161.4 163 58.3
FAN20G0962 Fragaria x ananassa HOM05D007479 ORTHO05D009416 6.7e-38 161.4 179 49.7
Nn3g21272 Nelumbo nucifera HOM05D007479 ORTHO05D009416 6.7e-38 161.4 187 52.4
TPR.G32316 Trifolium pratense HOM05D007479 ORTHO05D009416 6.7e-38 161.4 101 76.2
Glyma.19G206000 Glycine max HOM05D007479 ORTHO05D009416 8.8e-38 161.0 109 73.4
Potri.014G135400 Populus trichocarpa HOM05D007479 ORTHO05D009416 8.8e-38 161.0 183 54.1
Actinidia00698 Actinidia chinensis HOM05D007479 ORTHO05D009416 1.1e-37 160.6 159 58.5
CDE09G0484 Ceratophyllum demersum HOM05D007479 ORTHO05D009416 1.1e-37 160.6 111 69.4
DCAR_002787 Daucus carota HOM05D007479 ORTHO05D009416 1.5e-37 160.2 130 66.2
Nitab4.5_0004150g0020 Nicotiana tabacum HOM05D007479 ORTHO05D009416 1.5e-37 160.2 147 60.5
FvH4_2g24710 Fragaria vesca HOM05D007479 ORTHO05D009416 2.0e-37 159.8 175 51.4
Lalb_Chr18g0047491 Lupinus albus HOM05D007479 ORTHO05D009416 2.0e-37 159.8 112 68.8
Psat3g024840 Pisum sativum HOM05D007479 ORTHO05D009416 2.6e-37 159.5 105 72.4
Cc01_g20220 Coffea canephora HOM05D007479 ORTHO05D009416 3.3e-37 159.1 131 63.4
FAN27G0664 Fragaria x ananassa HOM05D007479 ORTHO05D009416 3.3e-37 159.1 179 49.7
Nitab4.5_0002093g0220 Nicotiana tabacum HOM05D007479 ORTHO05D009416 3.3e-37 159.1 145 60.7
MELO3C015894.2 Cucumis melo HOM05D007479 ORTHO05D009416 4.4e-37 158.7 111 71.2
Hma1.2p1_0209F.1_g089100 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 4.4e-37 158.7 103 79.6
arahy.Tifrunner.gnm1.ann1.5G1G6M Arachis hypogaea HOM05D007479 ORTHO05D009416 5.7e-37 158.3 109 69.7
Haze_04810 Corylus avellana HOM05D007479 ORTHO05D009416 5.7e-37 158.3 136 62.5
Peaxi162Scf01039g00126 Petunia axillaris HOM05D007479 ORTHO05D009416 5.7e-37 158.3 127 66.1
ClCG09G006510 Citrullus lanatus HOM05D007479 ORTHO05D009416 7.4e-37 157.9 111 70.3
AT4G03150 Arabidopsis thaliana HOM05D007479 ORTHO05D009416 9.7e-37 157.5 131 61.1
BcaB01g01976 Brassica carinata HOM05D007479 ORTHO05D009416 9.7e-37 157.5 155 54.8
BolC9t53187H Brassica oleracea HOM05D007479 ORTHO05D009416 9.7e-37 157.5 125 63.2
Thhalv10029006m.g Eutrema salsugineum HOM05D007479 ORTHO05D009416 9.7e-37 157.5 110 67.3
Oeu047908.1 Olea europaea HOM05D007479 ORTHO05D009416 9.7e-37 157.5 137 60.6
Sp6g03190 Schrenkiella parvula HOM05D007479 ORTHO05D009416 9.7e-37 157.5 150 56.7
CARHR251580 Cardamine hirsuta HOM05D007479 ORTHO05D009416 1.7e-36 156.8 174 54.6
CsaV3_7G028280 Cucumis sativus L. HOM05D007479 ORTHO05D009416 1.7e-36 156.8 111 69.4
AL6G49780 Arabidopsis lyrata HOM05D007479 ORTHO05D009416 2.2e-36 156.4 113 70.8
Sopen06g035860 Solanum pennellii HOM05D007479 ORTHO05D009416 2.2e-36 156.4 128 60.9
Solyc06g084470.4 Solanum lycopersicum HOM05D007479 ORTHO05D009416 2.8e-36 156.0 128 60.9
A09p02470 Brassica napus HOM05D007479 ORTHO05D009416 3.7e-36 155.6 125 62.4
BraA09t35894Z Brassica rapa HOM05D007479 ORTHO05D009416 3.7e-36 155.6 125 62.4
PGR044G0517 Punica granatum HOM05D007479 ORTHO05D009416 3.7e-36 155.6 170 51.8
Rhsim13G0017200 Rhododendron simsii HOM05D007479 ORTHO05D009416 3.7e-36 155.6 104 75.0
C09p02570 Brassica napus HOM05D007479 ORTHO05D009416 4.8e-36 155.2 125 61.6
Sed0025615 Sechium edule HOM05D007479 ORTHO05D009416 6.3e-36 154.8 182 52.2
AUR62036657 Chenopodium quinoa HOM05D007479 ORTHO05D009416 8.2e-36 154.5 140 59.3
Migut.N01396 Erythranthe guttata HOM05D007479 ORTHO05D009416 8.2e-36 154.5 127 64.6
Eucgr.K03432 Eucalyptus grandis HOM05D007479 ORTHO05D009416 8.2e-36 154.5 153 57.5
HanXRQChr11g0350171 Helianthus annuus HOM05D007479 ORTHO05D009416 8.2e-36 154.5 161 54.0
THA.LOC104826012 Tarenaya hassleriana HOM05D007479 ORTHO05D009416 1.1e-35 154.1 109 69.7
HPP92_010636 Vanilla planifolia HOM05D007479 ORTHO05D009416 1.1e-35 154.1 155 56.8
Hund18029 Selenicereus undatus HOM05D007479 ORTHO05D009416 1.4e-35 153.7 148 56.1
MSTRG.12593 Avicennia marina HOM05D007479 ORTHO05D009416 1.8e-35 153.3 129 63.6
Carub.0006s3390 Capsella rubella HOM05D007479 ORTHO05D009416 2.4e-35 152.9 117 65.0
ECA236G2582 Erigeron canadensis HOM05D007479 ORTHO05D009416 3.1e-35 152.5 119 65.5
PGSC0003DMG400024042 Solanum tuberosum HOM05D007479 ORTHO05D009416 4.1e-35 152.1 128 60.2
Lsat_1_v5_gn_8_55221 Lactuca sativa HOM05D007479 ORTHO05D009416 2.6e-34 149.4 129 62.0
ATR0706G261 Amborella trichopoda HOM05D001702 ORTHO05D001791 5.9e-34 148.3 114 62.3
unitig_21.g20281 Utricularia gibba HOM05D007479 ORTHO05D009416 2.2e-33 146.4 167 53.3
Os12g0534100 Oryza sativa ssp. japonica HOM05D007479 ORTHO05D009416 2.9e-33 146.0 103 68.9
SalBow6G0786 Salvia bowleyana HOM05D007479 ORTHO05D009416 6.5e-33 144.8 109 67.9
Sc17g0003550 Simmondsia chinensis HOM05D007479 ORTHO05D009416 1.4e-32 143.7 150 53.3
SGA_v2.0_scaffold172G39060 Striga asiatica HOM05D007479 ORTHO05D009416 9.4e-32 141.0 182 48.4
Hma1.2p1_0209F.1_g089110 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 2.3e-30 136.3 88 80.7
Lj2P1185T15 Lonicera japonica HOM05D007479 ORTHO05D009416 3.0e-30 136.0 88 77.3
vmacro02508 Vaccinium macrocarpon HOM05D007479 ORTHO05D009416 2.2e-28 129.8 88 76.1
AUR62034613 Chenopodium quinoa HOM05D007479 ORTHO05D009416 2.8e-28 129.4 86 74.4
Mapoly0029s0155 Marchantia polymorpha HOM05D007479 ORTHO05D009416 7.7e-26 121.3 109 51.4
Mapoly0275s0001 Marchantia polymorpha HOM05D007479 ORTHO05D009416 7.7e-26 121.3 109 51.4
SalBow8G4180 Salvia bowleyana HOM05D007479 ORTHO05D009416 5.0e-25 118.6 86 72.1
AagrBONN_evm.TU.Sc2ySwM_368.764 Anthoceros agrestis HOM05D007479 ORTHO05D009416 1.2e-23 114.0 109 50.5
Pp3c5_13320 Physcomitrium patens HOM05D007479 ORTHO05D009416 4.7e-23 112.1 152 43.4
CBR_g22325 Chara braunii HOM05D007479 ORTHO05D009416 1.2e-21 107.5 114 50.0
Dinv32992 Davidia involucrata HOM05D007479 ORTHO05D009416 3.8e-09 65.9 38 73.7


User provided reference genes

Program Settings