Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO566G0049 Papaver somniferum HOM05D004654 ORTHO05D005414 6.2e-123 444.1 222 100.0
PSO566G0349 Papaver somniferum HOM05D004654 ORTHO05D005414 6.2e-123 444.1 222 100.0
PSO782G3544 Papaver somniferum HOM05D004654 ORTHO05D005414 9.3e-119 430.3 222 96.4
Aqoxy5G02573 Aquilegia oxysepala HOM05D004654 ORTHO05D005414 1.4e-37 160.6 239 49.4
TAR374G0741 Trochodendron aralioides HOM05D004654 ORTHO05D005414 9.2e-34 147.9 234 48.7
TAR622G1006 Trochodendron aralioides HOM05D004654 ORTHO05D005414 1.6e-33 147.1 211 46.4
MBI03_g05124_MAGBIO Magnolia biondii HOM05D004654 ORTHO05D005414 3.3e-31 139.4 227 44.1
MBI03_g34062_MAGBIO Magnolia biondii HOM05D004654 ORTHO05D005414 4.3e-31 139.0 218 45.4
QL02p056026 Quercus lobata HOM05D004654 ORTHO05D005414 2.3e-29 133.3 226 44.2
Cpa.g.sc108.18 Carica papaya HOM05D004654 ORTHO05D005414 5.2e-29 132.1 227 44.1
QL02p054970 Quercus lobata HOM05D004654 ORTHO05D005414 7.6e-28 128.3 213 44.6
Ciclev10012875m.g Citrus clementina HOM05D004654 ORTHO05D005414 1.3e-27 127.5 212 43.9
Thhalv10019176m.g Eutrema salsugineum HOM05D004654 ORTHO05D005414 1.1e-26 124.4 213 43.2
CDE04G3704 Ceratophyllum demersum HOM05D004654 ORTHO05D005414 1.9e-26 123.6 206 42.2
CiPaw.13G067300 Carya illinoinensis HOM05D004654 ORTHO05D005414 4.1e-26 122.5 222 45.0
ATR0618G257 Amborella trichopoda HOM05D004654 ORTHO05D005414 7.1e-26 121.7 215 42.8
CiPaw.03G008900 Carya illinoinensis HOM05D004654 ORTHO05D005414 2.1e-25 120.2 224 43.8
Ah.06g191460 Amaranthus hybridus HOM05D004654 ORTHO05D005414 3.5e-25 119.4 228 39.0
MBI06_g28670_MAGBIO Magnolia biondii HOM05D004654 ORTHO05D005414 3.5e-25 119.4 201 44.8
CDE07G1822 Ceratophyllum demersum HOM05D004654 ORTHO05D005414 6.0e-25 118.6 200 41.0
CiPaw.07G102900 Carya illinoinensis HOM05D004654 ORTHO05D005414 1.7e-24 117.1 213 44.6
Atru.chr1.2194 Acer truncatum HOM05D004654 ORTHO05D005414 2.3e-24 116.7 217 42.9
Cfa008008 Carpinus fangiana HOM05D004654 ORTHO05D005414 2.3e-24 116.7 216 47.2
AUR62004739 Chenopodium quinoa HOM05D004654 ORTHO05D005414 2.3e-24 116.7 227 39.2
vmacro20421 Vaccinium macrocarpon HOM05D004654 ORTHO05D005414 3.0e-24 116.3 225 42.2
AL2G22850 Arabidopsis lyrata HOM05D004654 ORTHO05D005414 3.9e-24 115.9 219 42.5
Aa31LG2G2610 Aethionema arabicum HOM05D004654 ORTHO05D005414 5.1e-24 115.5 204 40.2
Dinv28280 Davidia involucrata HOM05D004654 ORTHO05D005414 8.6e-24 114.8 234 39.7
Manes.01G125100 Manihot esculenta HOM05D004654 ORTHO05D005414 1.1e-23 114.4 203 43.3
AT1G65720 Arabidopsis thaliana HOM05D004654 ORTHO05D005414 2.5e-23 113.2 216 41.2
A07p32950 Brassica napus HOM05D004654 ORTHO05D005414 4.3e-23 112.5 203 40.9
Carub.0002s1154 Capsella rubella HOM05D004654 ORTHO05D005414 4.3e-23 112.5 216 43.1
vmacro23510 Vaccinium macrocarpon HOM05D004654 ORTHO05D005414 4.3e-23 112.5 219 42.0
MD09G1282600 Malus domestica HOM05D004654 ORTHO05D005414 5.6e-23 112.1 208 38.9
Sp5g20670 Schrenkiella parvula HOM05D004654 ORTHO05D005414 5.6e-23 112.1 221 39.4
Haze_14051 Corylus avellana HOM05D004654 ORTHO05D005414 1.2e-22 110.9 222 45.0
Manes.02G082600 Manihot esculenta HOM05D004654 ORTHO05D005414 1.2e-22 110.9 213 42.7
Ah.04g162850 Amaranthus hybridus HOM05D004654 ORTHO05D005414 1.6e-22 110.5 228 39.9
BraA07t30922Z Brassica rapa HOM05D004654 ORTHO05D005414 2.1e-22 110.2 203 39.4
HPP92_007306 Vanilla planifolia HOM05D004654 ORTHO05D005414 2.1e-22 110.2 210 40.5
AUR62037512 Chenopodium quinoa HOM05D004654 ORTHO05D005414 2.8e-22 109.8 227 36.6
arahy.Tifrunner.gnm1.ann1.C1RHT9 Arachis hypogaea HOM05D004654 ORTHO05D005414 3.6e-22 109.4 192 40.1
BolC6t39010H Brassica oleracea HOM05D004654 ORTHO05D005414 4.7e-22 109.0 207 42.5
CARHR057580 Cardamine hirsuta HOM05D004654 ORTHO05D005414 4.7e-22 109.0 184 43.5
Nn4g24900 Nelumbo nucifera HOM05D004654 ORTHO05D005414 4.7e-22 109.0 136 52.2
Actinidia17131 Actinidia chinensis HOM05D004654 ORTHO05D005414 6.2e-22 108.6 221 38.9
COL.COLO4_00809 Corchorus olitorius HOM05D004654 ORTHO05D005414 6.2e-22 108.6 192 39.6
Prupe.3G011600 Prunus persica HOM05D004654 ORTHO05D005414 6.2e-22 108.6 204 38.7
THA.LOC104822158 Tarenaya hassleriana HOM05D004654 ORTHO05D005414 6.2e-22 108.6 202 39.6
THA.LOC104823831 Tarenaya hassleriana HOM05D004654 ORTHO05D005414 1.8e-21 107.1 202 38.6
GSVIVG01005258001 Vitis vinifera HOM05D004654 ORTHO05D005414 2.4e-21 106.7 211 38.4
C06p39170 Brassica napus HOM05D004654 ORTHO05D005414 3.1e-21 106.3 204 41.2
THA.LOC104805666 Tarenaya hassleriana HOM05D004654 ORTHO05D005414 3.1e-21 106.3 197 41.1
CANSAT78G0950 Cannabis sativa HOM05D004654 ORTHO05D005414 6.9e-21 105.1 210 40.5
Duzib138G0480 Durio zibethinus HOM05D004654 ORTHO05D005414 1.2e-20 104.4 204 39.2
MD17G1272400 Malus domestica HOM05D004654 ORTHO05D005414 1.5e-20 104.0 207 39.1
HPP92_022519 Vanilla planifolia HOM05D004654 ORTHO05D005414 1.5e-20 104.0 214 38.8
Gohir.A12G053100 Gossypium hirsutum HOM05D004654 ORTHO05D005414 4.4e-20 102.4 204 37.7
Phvul.006G084100 Phaseolus vulgaris HOM05D004654 ORTHO05D005414 5.8e-20 102.1 197 40.6
Glyma.11G204100 Glycine max HOM05D004654 ORTHO05D005414 7.6e-20 101.7 210 37.1
Glyma.18G046900 Glycine max HOM05D004654 ORTHO05D005414 1.3e-19 100.9 206 35.4
Gohir.A08G038100 Gossypium hirsutum HOM05D004654 ORTHO05D005414 1.3e-19 100.9 170 42.9
Gorai.008G054900 Gossypium raimondii HOM05D004654 ORTHO05D005414 1.3e-19 100.9 198 38.4
Actinidia35698 Actinidia chinensis HOM05D004654 ORTHO05D005414 1.7e-19 100.5 217 35.5
Ca_15106_v3 Cicer arietinum L. HOM05D004654 ORTHO05D005414 2.2e-19 100.1 214 37.4
Hma1.2p1_0034F.1_g021540 Hydrangea macrophylla HOM05D004654 ORTHO05D005414 2.2e-19 100.1 233 36.5
Thecc.04G056200 Theobroma cacao HOM05D004654 ORTHO05D005414 2.2e-19 100.1 181 40.3
Gohir.D12G051600 Gossypium hirsutum HOM05D004654 ORTHO05D005414 3.8e-19 99.4 198 37.9
VMungo0540G1596 Vigna mungo HOM05D004654 ORTHO05D005414 4.9e-19 99.0 213 39.0
Gohir.D08G048300 Gossypium hirsutum HOM05D004654 ORTHO05D005414 8.4e-19 98.2 170 41.8
Gorai.004G047800 Gossypium raimondii HOM05D004654 ORTHO05D005414 8.4e-19 98.2 170 41.8
Psat5g143960 Pisum sativum HOM05D004654 ORTHO05D005414 8.4e-19 98.2 219 37.4
Potri.004G078500 Populus trichocarpa HOM05D004654 ORTHO05D005414 8.4e-19 98.2 213 41.8
TPR.G37307 Trifolium pratense HOM05D004654 ORTHO05D005414 8.4e-19 98.2 186 39.8
FAN28G0174 Fragaria x ananassa HOM05D004654 ORTHO05D005414 1.1e-18 97.8 202 39.6
FAN19G2236 Fragaria x ananassa HOM05D004654 ORTHO05D005414 1.9e-18 97.1 202 39.6
Sabra17G0119000 Salix brachista HOM05D004654 ORTHO05D005414 1.9e-18 97.1 218 41.3
ClCG05G011320 Citrullus lanatus HOM05D004654 ORTHO05D005414 2.4e-18 96.7 209 37.8
Lj6g0008387 Lotus japonicus HOM05D004654 ORTHO05D005414 2.4e-18 96.7 203 37.4
Sed0014762 Sechium edule HOM05D004654 ORTHO05D005414 2.4e-18 96.7 208 37.0
BcaC03g14719 Brassica carinata HOM05D004654 ORTHO05D005414 4.2e-18 95.9 213 39.9
C02p21610 Brassica napus HOM05D004654 ORTHO05D005414 4.2e-18 95.9 213 39.9
FAN28G0874 Fragaria x ananassa HOM05D004654 ORTHO05D005414 5.4e-18 95.5 202 39.6
BolC2t08298H Brassica oleracea HOM05D004654 ORTHO05D005414 7.1e-18 95.1 184 42.4
Potri.017G142100 Populus trichocarpa HOM05D004654 ORTHO05D005414 9.3e-18 94.7 201 39.8
Medtr3g064040 Medicago truncatula HOM05D004654 ORTHO05D005414 1.2e-17 94.4 218 37.2
Sabra04G0052000 Salix brachista HOM05D004654 ORTHO05D005414 1.6e-17 94.0 200 37.5
arahy.Tifrunner.gnm1.ann1.RSI5EI Arachis hypogaea HOM05D004654 ORTHO05D005414 3.5e-17 92.8 210 36.2
Rhsim08G0023400 Rhododendron simsii HOM05D004654 ORTHO05D005414 4.6e-17 92.4 222 38.3
HanXRQChr15g0485191 Helianthus annuus HOM05D004654 ORTHO05D005414 6.0e-17 92.0 221 37.1
Dinv03197 Davidia involucrata HOM05D004654 ORTHO05D005414 1.0e-16 91.3 222 35.6
ECA246G3021 Erigeron canadensis HOM05D004654 ORTHO05D005414 1.0e-16 91.3 225 36.0
A02p13350 Brassica napus HOM05D004654 ORTHO05D005414 1.3e-16 90.9 183 39.3
BraA02t06392Z Brassica rapa HOM05D004654 ORTHO05D005414 1.3e-16 90.9 183 39.3
FAN26G0407 Fragaria x ananassa HOM05D004654 ORTHO05D005414 1.3e-16 90.9 203 39.4
CiPaw.03G260700 Carya illinoinensis HOM05D004654 ORTHO05D005414 2.3e-16 90.1 207 39.1
Lsat_1_v5_gn_3_68821 Lactuca sativa HOM05D004654 ORTHO05D005414 2.3e-16 90.1 209 36.4
Eucgr.F02926 Eucalyptus grandis HOM05D004654 ORTHO05D005414 3.0e-16 89.7 78 64.1
TWI77G0610 Tripterygium wilfordii HOM05D004654 ORTHO05D005414 3.9e-16 89.4 210 37.6
Lalb_Chr17g0345801 Lupinus albus HOM05D004654 ORTHO05D005414 5.1e-16 89.0 195 38.5
Hma1.2p1_0085F.1_g044140 Hydrangea macrophylla HOM05D004654 ORTHO05D005414 2.5e-15 86.7 236 34.7
MELO3C020251.2 Cucumis melo HOM05D004654 ORTHO05D005414 3.3e-15 86.3 185 38.4
Lalb_Chr20g0117181 Lupinus albus HOM05D004654 ORTHO05D005414 3.3e-15 86.3 231 33.8
HanXRQChr16g0532651 Helianthus annuus HOM05D004654 ORTHO05D005414 4.3e-15 85.9 220 36.4
Solyc03g031950.3 Solanum lycopersicum HOM05D004654 ORTHO05D005414 4.3e-15 85.9 237 36.3
TAR374G0450 Trochodendron aralioides HOM05D004654 ORTHO05D005414 4.3e-15 85.9 93 58.1
Sopen03g005810 Solanum pennellii HOM05D004654 ORTHO05D005414 5.6e-15 85.5 236 36.4
PGSC0003DMG400024083 Solanum tuberosum HOM05D004654 ORTHO05D005414 5.6e-15 85.5 241 36.9
Peaxi162Scf00918g00026 Petunia axillaris HOM05D004654 ORTHO05D005414 7.3e-15 85.1 219 36.1
PGR004G1881 Punica granatum HOM05D004654 ORTHO05D005414 7.3e-15 85.1 212 38.2
Sc09g0004620 Simmondsia chinensis HOM05D004654 ORTHO05D005414 7.3e-15 85.1 215 35.3
CsaV3_3G021140 Cucumis sativus L. HOM05D004654 ORTHO05D005414 9.6e-15 84.7 185 37.8
Dinv19105 Davidia involucrata HOM05D004654 ORTHO05D005414 9.6e-15 84.7 171 39.8
DCAR_002994 Daucus carota HOM05D004654 ORTHO05D005414 2.1e-14 83.6 214 36.0
Hma1.2p1_2924F.1_g330430 Hydrangea macrophylla HOM05D004654 ORTHO05D005414 2.1e-14 83.6 216 37.0
MD03G1273600 Malus domestica HOM05D004654 ORTHO05D005414 2.1e-14 83.6 195 33.8
EL10Ac4g08895 Beta vulgaris HOM05D004654 ORTHO05D005414 4.8e-14 82.4 93 55.9
Nitab4.5_0008713g0040 Nicotiana tabacum HOM05D004654 ORTHO05D005414 4.8e-14 82.4 238 36.1
Cc07_g12430 Coffea canephora HOM05D004654 ORTHO05D005414 1.4e-13 80.9 223 33.2
arahy.Tifrunner.gnm1.ann1.70EH4T Arachis hypogaea HOM05D004654 ORTHO05D005414 2.4e-13 80.1 205 35.6
PGSC0003DMG400037923 Solanum tuberosum HOM05D004654 ORTHO05D005414 2.4e-13 80.1 208 38.0
Os03g0110300 Oryza sativa ssp. japonica HOM05D004654 ORTHO05D005414 3.1e-13 79.7 191 36.6
Lsat_1_v5_gn_8_113741 Lactuca sativa HOM05D004654 ORTHO05D005414 5.3e-13 79.0 220 36.8
Haze_14062 Corylus avellana HOM05D004654 ORTHO05D005414 6.9e-13 78.6 167 43.1
FAN23G2643 Fragaria x ananassa HOM05D004654 ORTHO05D005414 9.0e-13 78.2 161 38.5
arahy.Tifrunner.gnm1.ann1.6F687N Arachis hypogaea HOM05D004654 ORTHO05D005414 1.5e-12 77.4 198 36.9
Lsat_1_v5_gn_2_72380 Lactuca sativa HOM05D004654 ORTHO05D005414 3.8e-11 72.8 228 32.5
HanXRQChr15g0486441 Helianthus annuus HOM05D004654 ORTHO05D005414 4.9e-11 72.4 186 34.9
Lalb_Chr10g0103991 Lupinus albus HOM05D004654 ORTHO05D005414 4.9e-11 72.4 83 53.0
Gohir.A04G103050 Gossypium hirsutum HOM05D004654 ORTHO05D005414 6.4e-11 72.0 70 54.3
DCAR_014130 Daucus carota HOM05D004654 ORTHO05D005414 1.9e-10 70.5 210 33.8
DCAR_000947 Daucus carota HOM05D004654 ORTHO05D005414 2.4e-10 70.1 94 43.6
Zm00001eb000770 Zea mays HOM05D004654 ORTHO05D005414 2.4e-10 70.1 80 50.0
Oeu034013.1 Olea europaea HOM05D004654 ORTHO05D005414 3.2e-10 69.7 202 33.2
SalBow6G0287 Salvia bowleyana HOM05D004654 ORTHO05D005414 7.1e-10 68.6 215 35.3
Os10g0483900 Oryza sativa ssp. japonica HOM05D004654 ORTHO05D005414 1.6e-09 67.4 217 31.3
Oeu024775.2 Olea europaea HOM05D004654 ORTHO05D005414 2.7e-09 66.6 215 34.9
Nitab4.5_0003016g0040 Nicotiana tabacum HOM05D004654 ORTHO05D005414 6.0e-09 65.5 223 32.7
BcaB03g15322 Brassica carinata HOM05D004654 ORTHO05D005414 1.0e-08 64.7 56 58.9
Migut.D00607 Erythranthe guttata HOM05D004654 ORTHO05D005414 1.0e-08 64.7 95 48.4
Zm00001eb045470 Zea mays HOM05D004654 ORTHO05D005414 1.3e-08 64.3 101 40.6
SGA_v2.0_scaffold247G44889 Striga asiatica HOM05D004654 ORTHO05D005414 2.3e-08 63.5 45 68.9
Zm00001eb221440 Zea mays HOM05D004654 ORTHO05D005414 2.3e-08 63.5 105 39.0
SGA_v2.0_scaffold8G04582 Striga asiatica HOM05D004654 ORTHO05D005414 3.0e-08 63.2 172 36.6
unitig_578.g16656 Utricularia gibba HOM05D004654 ORTHO05D005414 5.1e-08 62.4 77 45.5
unitig_85.g27201 Utricularia gibba HOM05D004654 ORTHO05D005414 7.4e-07 58.5 73 45.2
Nitab4.5_0000235g0010 Nicotiana tabacum HOM05D004654 ORTHO05D005414 9.6e-07 58.2 226 31.9
unitig_90.g27472 Utricularia gibba HOM05D004654 ORTHO05D005414 4.8e-06 55.8 179 36.3


User provided reference genes

Program Settings