Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 1.8e-162 575.9 294 100.0
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 7.4e-156 553.9 295 96.3
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 1.4e-125 453.4 295 79.3
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 4.5e-121 438.3 298 75.2
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 1.1e-119 433.7 294 72.8
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 1.1e-119 433.7 294 72.8
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 2.3e-117 426.0 291 74.2
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 4.0e-117 425.2 295 71.9
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 2.0e-116 422.9 295 71.5
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 4.4e-116 421.8 298 72.1
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 9.8e-116 420.6 295 71.2
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 9.8e-116 420.6 298 72.1
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.7e-115 419.9 298 71.8
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 3.7e-115 418.7 287 71.8
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 1.8e-114 416.4 295 73.6
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 7.0e-114 414.5 298 70.1
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 1.2e-113 413.7 304 69.7
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 1.2e-113 413.7 295 71.2
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 2.7e-113 412.5 295 72.5
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 2.7e-113 412.5 291 70.1
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 3.5e-113 412.1 294 69.0
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 5.9e-113 411.4 297 71.7
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 7.7e-113 411.0 279 72.4
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 7.7e-113 411.0 295 70.8
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 1.3e-112 410.2 279 75.6
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 2.9e-112 409.1 301 70.8
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 3.8e-112 408.7 295 69.5
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 5.0e-112 408.3 294 70.4
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 5.0e-112 408.3 283 71.7
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 6.5e-112 407.9 298 71.5
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 6.5e-112 407.9 286 71.7
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 1.9e-111 406.4 300 70.0
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 3.2e-111 405.6 299 68.2
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 3.2e-111 405.6 287 71.1
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 4.2e-111 405.2 302 68.5
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 7.2e-111 404.4 295 69.5
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 1.2e-110 403.7 297 70.7
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 1.6e-110 403.3 294 68.7
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 1.6e-110 403.3 298 67.8
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 1.6e-110 403.3 305 67.9
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 2.7e-110 402.5 294 68.7
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 4.7e-110 401.7 312 66.7
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 8.0e-110 401.0 298 69.1
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.3e-109 399.4 298 68.5
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 2.3e-109 399.4 301 68.1
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 2.3e-109 399.4 296 70.3
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 3.0e-109 399.1 293 68.3
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 4.0e-109 398.7 294 69.7
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 5.2e-109 398.3 288 70.5
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 6.8e-109 397.9 298 69.8
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 8.8e-109 397.5 301 68.1
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 1.2e-108 397.1 298 68.5
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 1.2e-108 397.1 305 67.2
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 1.2e-108 397.1 294 69.4
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 1.5e-108 396.7 297 69.4
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 1.5e-108 396.7 298 68.8
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 1.5e-108 396.7 304 67.1
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 4.4e-108 395.2 298 69.5
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.7e-107 393.3 298 68.5
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 3.7e-107 392.1 293 71.7
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 3.7e-107 392.1 297 68.0
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 3.7e-107 392.1 276 71.4
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 4.9e-107 391.7 304 67.1
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 6.3e-107 391.3 309 65.7
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.1e-106 390.6 297 66.7
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 1.4e-106 390.2 276 70.7
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 3.1e-106 389.0 293 70.0
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 4.1e-106 388.7 306 65.7
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 9.2e-106 387.5 279 68.8
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 5.9e-105 384.8 293 69.6
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 2.9e-104 382.5 294 69.0
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 6.6e-104 381.3 283 67.8
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 1.1e-103 380.6 292 67.1
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 1.5e-103 380.2 293 68.9
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 1.5e-103 380.2 374 55.3
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 1.9e-103 379.8 293 66.9
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 2.5e-103 379.4 292 68.5
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 2.5e-103 379.4 305 64.6
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 2.5e-103 379.4 280 69.6
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 3.3e-103 379.0 319 63.9
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 2.8e-102 375.9 293 66.6
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 3.6e-102 375.6 298 66.4
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 3.6e-102 375.6 279 68.5
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 4.7e-102 375.2 277 69.0
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 6.1e-102 374.8 295 66.4
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 1.4e-101 373.6 294 66.3
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 1.4e-101 373.6 250 77.2
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 3.0e-101 372.5 294 66.3
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 6.8e-101 371.3 295 66.4
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 1.2e-100 370.5 293 66.6
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 1.5e-100 370.2 294 66.3
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 1.5e-100 370.2 294 66.3
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 4.4e-100 368.6 277 68.2
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 2.4e-98 362.8 286 66.1
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 3.2e-98 362.5 301 66.1
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 7.8e-97 357.8 271 68.6
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 3.6e-94 349.0 452 46.9
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 3.1e-93 345.9 296 61.1
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 3.4e-92 342.4 294 59.9
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 6.4e-91 338.2 300 63.0
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 1.1e-90 337.4 298 61.1
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 1.7e-88 330.1 253 66.4
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 3.0e-88 329.3 283 62.2
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 2.8e-86 322.8 260 66.2
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 2.2e-83 313.2 198 76.8
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 1.4e-82 310.5 291 59.5
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 2.7e-81 306.2 258 61.6
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 7.8e-81 304.7 293 54.3
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 8.1e-78 294.7 209 70.8
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 3.1e-77 292.7 205 71.7
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 1.5e-76 290.4 300 50.7
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 6.6e-72 275.0 297 52.2
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 1.9e-71 273.5 167 80.2
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 7.3e-71 271.6 274 52.6
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 2.1e-70 270.0 297 51.9
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 8.1e-70 268.1 276 50.7
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 5.2e-69 265.4 277 55.6
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 7.1e-66 255.0 274 51.1
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 2.1e-65 253.4 273 49.5
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 2.1e-65 253.4 270 48.5
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 2.1e-62 243.4 165 73.3
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 2.8e-62 243.0 273 49.1
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 2.4e-61 240.0 253 56.1
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 2.9e-59 233.0 165 70.9
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 1.9e-55 220.3 273 46.2
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 8.1e-54 214.9 169 69.2
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 2.9e-51 206.5 264 48.9
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 1.1e-47 194.5 212 54.7
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 8.2e-38 161.8 117 68.4
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 6.9e-37 158.7 137 58.4
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 1.4e-29 134.4 133 52.6
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 4.4e-23 112.8 127 50.4
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 1.3e-19 101.3 97 57.7
A03p61560 Brassica napus HOM05D005681 ORTHO05D040333 4.4e-15 86.3 241 34.9
BraA03t15198Z Brassica rapa HOM05D005681 ORTHO05D040333 1.2e-09 68.2 178 36.0
ATR0326G034 Amborella trichopoda HOM05D005681 ORTHO05D068436 3.3e-07 60.1 59 50.8


User provided reference genes

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