Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO566G0277 Papaver somniferum HOM05D003644 ORTHO05D004305 1.6e-101 372.9 203 100.0
PSO782G2161 Papaver somniferum HOM05D003644 ORTHO05D004305 2.0e-99 365.9 203 98.5
TAR624G1421 Trochodendron aralioides HOM05D003644 ORTHO05D004305 4.3e-38 162.2 209 52.6
MBI04_g14930_MAGBIO Magnolia biondii HOM05D003644 ORTHO05D004305 5.6e-38 161.8 207 49.8
TAR636G2793 Trochodendron aralioides HOM05D003644 ORTHO05D004305 1.2e-35 154.1 210 51.0
GSVIVG01015346001 Vitis vinifera HOM05D003644 ORTHO05D004305 2.0e-35 153.3 213 47.4
Thecc.09G105500 Theobroma cacao HOM05D003644 ORTHO05D004305 1.2e-32 144.1 214 45.3
Duzib187G1156 Durio zibethinus HOM05D003644 ORTHO05D004305 2.7e-32 142.9 214 44.9
Nn2g11654 Nelumbo nucifera HOM05D003644 ORTHO05D004305 3.5e-32 142.5 217 47.5
Nn3g18137 Nelumbo nucifera HOM05D003644 ORTHO05D004305 7.9e-32 141.4 212 47.6
Duzib168G0231 Durio zibethinus HOM05D003644 ORTHO05D004305 1.3e-31 140.6 211 44.5
CiPaw.03G227900 Carya illinoinensis HOM05D003644 ORTHO05D004305 6.7e-31 138.3 215 45.6
QL02p044635 Quercus lobata HOM05D003644 ORTHO05D004305 6.7e-31 138.3 215 49.3
Duzib150G1566 Durio zibethinus HOM05D003644 ORTHO05D004305 1.9e-30 136.7 208 45.2
Manes.03G024200 Manihot esculenta HOM05D003644 ORTHO05D004305 7.4e-30 134.8 210 44.8
Ciclev10010512m.g Citrus clementina HOM05D003644 ORTHO05D004305 1.3e-29 134.0 217 49.3
Potri.018G084100 Populus trichocarpa HOM05D003644 ORTHO05D004305 1.6e-29 133.7 216 43.5
CSS0010496 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 2.1e-29 133.3 217 42.9
CSS0033414 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 2.1e-29 133.3 217 42.9
arahy.Tifrunner.gnm1.ann1.XM0XDL Arachis hypogaea HOM05D003644 ORTHO05D004305 2.8e-29 132.9 214 48.6
CSS0008241 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 6.3e-29 131.7 214 49.5
Haze_25785 Corylus avellana HOM05D003644 ORTHO05D004305 8.2e-29 131.3 209 45.0
Peaxi162Scf00665g00003 Petunia axillaris HOM05D003644 ORTHO05D004305 5.3e-28 128.6 209 47.8
Manes.16G112500 Manihot esculenta HOM05D003644 ORTHO05D004305 2.0e-27 126.7 211 42.7
Gohir.D05G026700 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.6e-27 126.3 214 50.5
VMungo0251G1747 Vigna mungo HOM05D003644 ORTHO05D004305 4.5e-27 125.6 215 42.3
Phvul.002G311400 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 5.9e-27 125.2 214 43.0
TWI34G1832 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 5.9e-27 125.2 223 47.5
Glyma.05G229100 Glycine max HOM05D003644 ORTHO05D004305 7.6e-27 124.8 203 44.8
SalBow6G0047 Salvia bowleyana HOM05D003644 ORTHO05D004305 1.0e-26 124.4 216 46.3
CANSAT56G0200 Cannabis sativa HOM05D003644 ORTHO05D004305 1.7e-26 123.6 225 42.7
TWI32G0193 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 5.0e-26 122.1 214 50.9
VMungo0464G0020 Vigna mungo HOM05D003644 ORTHO05D004305 6.5e-26 121.7 215 49.8
Gorai.010G073900 Gossypium raimondii HOM05D003644 ORTHO05D004305 1.1e-25 120.9 211 42.2
Sopen12g003210 Solanum pennellii HOM05D003644 ORTHO05D004305 1.4e-25 120.6 206 47.6
Cpa.g.sc23.57 Carica papaya HOM05D003644 ORTHO05D004305 1.9e-25 120.2 212 40.6
Gohir.A05G025200 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.5e-25 119.8 211 49.3
MSTRG.19571 Avicennia marina HOM05D003644 ORTHO05D004305 4.2e-25 119.0 168 45.8
Gorai.009G026800 Gossypium raimondii HOM05D003644 ORTHO05D004305 4.2e-25 119.0 222 48.6
Peaxi162Scf00231g00061 Petunia axillaris HOM05D003644 ORTHO05D004305 4.2e-25 119.0 206 45.6
PGSC0003DMG400000374 Solanum tuberosum HOM05D003644 ORTHO05D004305 7.2e-25 118.2 207 46.9
Prupe.7G225200 Prunus persica HOM05D003644 ORTHO05D004305 9.3e-25 117.9 217 44.2
Phvul.004G168350 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 1.2e-24 117.5 209 48.8
arahy.Tifrunner.gnm1.ann1.R9ZCFD Arachis hypogaea HOM05D003644 ORTHO05D004305 1.0e-23 114.4 176 50.6
arahy.Tifrunner.gnm1.ann1.TDG8V6 Arachis hypogaea HOM05D003644 ORTHO05D004305 1.8e-23 113.6 225 41.3
Glyma.08G036100 Glycine max HOM05D003644 ORTHO05D004305 1.8e-23 113.6 204 40.7
Gohir.D06G063400 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.8e-23 113.6 208 40.9
MD02G1057600 Malus domestica HOM05D003644 ORTHO05D004305 2.3e-23 113.2 213 45.5
Glyma.01G145600 Glycine max HOM05D003644 ORTHO05D004305 3.0e-23 112.8 215 48.4
Lj2g0017641 Lotus japonicus HOM05D003644 ORTHO05D004305 3.0e-23 112.8 213 42.7
THA.LOC104814562 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 5.1e-23 112.1 216 41.2
Potri.006G161100 Populus trichocarpa HOM05D003644 ORTHO05D004305 8.7e-23 111.3 209 39.7
FAN23G2152 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.5e-22 110.5 225 47.6
Sed0013314 Sechium edule HOM05D003644 ORTHO05D004305 1.5e-22 110.5 204 43.6
DCAR_012057 Daucus carota HOM05D003644 ORTHO05D004305 1.9e-22 110.2 217 42.9
ClCG06G008860 Citrullus lanatus HOM05D003644 ORTHO05D004305 3.3e-22 109.4 210 39.0
Oeu015581.1 Olea europaea HOM05D003644 ORTHO05D004305 3.3e-22 109.4 208 39.4
Sabra18G0072500 Salix brachista HOM05D003644 ORTHO05D004305 4.3e-22 109.0 234 37.6
MELO3C024703.2 Cucumis melo HOM05D003644 ORTHO05D004305 5.7e-22 108.6 207 42.0
CsaV3_1G021830 Cucumis sativus L. HOM05D003644 ORTHO05D004305 5.7e-22 108.6 206 41.7
Glyma.09G193400 Glycine max HOM05D003644 ORTHO05D004305 5.7e-22 108.6 215 42.8
FAN28G1311 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.3e-21 107.5 225 45.3
Gohir.A06G064800 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.3e-21 107.5 211 39.3
FAN19G0617 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.6e-21 107.1 214 46.7
FAN26G3023 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.6e-21 107.1 214 47.7
AL3G48010 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 2.8e-21 106.3 205 41.0
MSTRG.6013 Avicennia marina HOM05D003644 ORTHO05D004305 2.8e-21 106.3 170 44.7
FvH4_1g05660 Fragaria vesca HOM05D003644 ORTHO05D004305 6.3e-21 105.1 214 46.7
FAN26G0903 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.1e-20 104.4 214 46.7
Dinv41640 Davidia involucrata HOM05D003644 ORTHO05D004305 1.8e-20 103.6 171 40.9
Thhalv10002311m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 1.8e-20 103.6 209 41.1
C01p10620 Brassica napus HOM05D003644 ORTHO05D004305 3.1e-20 102.8 210 39.5
BraA01t00855Z Brassica rapa HOM05D003644 ORTHO05D004305 3.1e-20 102.8 210 39.5
CAN.G1774.6 Capsicum annuum HOM05D003644 ORTHO05D004305 4.1e-20 102.4 169 45.0
A01p09070 Brassica napus HOM05D003644 ORTHO05D004305 5.3e-20 102.1 210 39.5
PGSC0003DMG400003139 Solanum tuberosum HOM05D003644 ORTHO05D004305 5.3e-20 102.1 205 39.5
ClCG11G002330 Citrullus lanatus HOM05D003644 ORTHO05D004305 6.9e-20 101.7 211 43.6
THA.LOC104804017 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 6.9e-20 101.7 210 44.8
Cc06_g10070 Coffea canephora HOM05D003644 ORTHO05D004305 9.0e-20 101.3 213 44.6
Sed0019018 Sechium edule HOM05D003644 ORTHO05D004305 9.0e-20 101.3 221 36.2
MELO3C004570.2 Cucumis melo HOM05D003644 ORTHO05D004305 1.2e-19 100.9 211 45.5
CsaV3_2G002110 Cucumis sativus L. HOM05D003644 ORTHO05D004305 1.5e-19 100.5 211 42.2
Medtr6g088280 Medicago truncatula HOM05D003644 ORTHO05D004305 1.5e-19 100.5 213 40.4
TPR.G34913 Trifolium pratense HOM05D003644 ORTHO05D004305 1.5e-19 100.5 217 38.2
arahy.Tifrunner.gnm1.ann1.X7P2RE Arachis hypogaea HOM05D003644 ORTHO05D004305 2.0e-19 100.1 154 44.2
BolC1t01024H Brassica oleracea HOM05D003644 ORTHO05D004305 2.0e-19 100.1 210 39.0
Lalb_Chr05g0223051 Lupinus albus HOM05D003644 ORTHO05D004305 4.5e-19 99.0 187 48.7
Sp3g33380 Schrenkiella parvula HOM05D003644 ORTHO05D004305 4.5e-19 99.0 216 40.7
CARHR110580 Cardamine hirsuta HOM05D003644 ORTHO05D004305 1.0e-18 97.8 205 39.0
Sopen07g007520 Solanum pennellii HOM05D003644 ORTHO05D004305 1.3e-18 97.4 206 42.7
Atru.chr7.1390 Acer truncatum HOM05D003644 ORTHO05D004305 2.2e-18 96.7 217 40.1
Aqoxy7G01525 Aquilegia oxysepala HOM05D003644 ORTHO05D004305 2.2e-18 96.7 211 37.4
Gorai.001G007300 Gossypium raimondii HOM05D003644 ORTHO05D004305 2.2e-18 96.7 217 38.2
BcaC07g41224 Brassica carinata HOM05D003644 ORTHO05D004305 3.8e-18 95.9 211 36.5
AUR62010940 Chenopodium quinoa HOM05D003644 ORTHO05D004305 5.0e-18 95.5 214 37.9
PGR102G0050 Punica granatum HOM05D003644 ORTHO05D004305 5.0e-18 95.5 214 42.1
Hund09225 Selenicereus undatus HOM05D003644 ORTHO05D004305 5.0e-18 95.5 219 43.4
ECA234G2378 Erigeron canadensis HOM05D003644 ORTHO05D004305 8.5e-18 94.7 172 42.4
COL.COLO4_34805 Corchorus olitorius HOM05D003644 ORTHO05D004305 1.4e-17 94.0 205 45.9
Migut.K00491 Erythranthe guttata HOM05D003644 ORTHO05D004305 1.4e-17 94.0 211 42.7
BcaC09g51666 Brassica carinata HOM05D003644 ORTHO05D004305 1.9e-17 93.6 172 41.9
C08p42300 Brassica napus HOM05D003644 ORTHO05D004305 1.9e-17 93.6 211 36.0
BolC8t51790H Brassica oleracea HOM05D003644 ORTHO05D004305 1.9e-17 93.6 211 36.0
Gohir.D07G007600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.9e-17 93.6 216 38.0
C07p56470 Brassica napus HOM05D003644 ORTHO05D004305 3.2e-17 92.8 209 40.7
BcaC06g32601 Brassica carinata HOM05D003644 ORTHO05D004305 4.2e-17 92.4 209 40.2
BcaNung01359 Brassica carinata HOM05D003644 ORTHO05D004305 4.2e-17 92.4 172 40.1
BolC7t46126H Brassica oleracea HOM05D003644 ORTHO05D004305 4.2e-17 92.4 209 40.7
Hma1.2p1_0945F.1_g240090 Hydrangea macrophylla HOM05D003644 ORTHO05D004305 4.2e-17 92.4 204 41.7
Lalb_Chr22g0352641 Lupinus albus HOM05D003644 ORTHO05D004305 4.2e-17 92.4 220 43.2
Lsat_1_v5_gn_8_96040 Lactuca sativa HOM05D003644 ORTHO05D004305 5.5e-17 92.0 125 48.0
A03p58450 Brassica napus HOM05D003644 ORTHO05D004305 7.2e-17 91.7 209 40.7
Psat1g044920 Pisum sativum HOM05D003644 ORTHO05D004305 7.2e-17 91.7 212 40.1
Carub.0007s1180 Capsella rubella HOM05D003644 ORTHO05D004305 9.4e-17 91.3 218 39.4
AT4G28840 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 2.1e-16 90.1 211 38.9
A09p59020 Brassica napus HOM05D003644 ORTHO05D004305 2.1e-16 90.1 211 35.5
BraA09t41288Z Brassica rapa HOM05D003644 ORTHO05D004305 2.1e-16 90.1 211 35.5
MD15G1192000 Malus domestica HOM05D003644 ORTHO05D004305 2.7e-16 89.7 213 39.9
Gohir.A07G004600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 3.6e-16 89.4 178 41.0
Sed0028016 Sechium edule HOM05D003644 ORTHO05D004305 4.6e-16 89.0 208 35.1
Sc18g0001380 Simmondsia chinensis HOM05D003644 ORTHO05D004305 6.1e-16 88.6 204 32.8
Sp7g26840 Schrenkiella parvula HOM05D003644 ORTHO05D004305 7.9e-16 88.2 209 43.5
PGR142G1369 Punica granatum HOM05D003644 ORTHO05D004305 1.0e-15 87.8 227 39.2
RcHm_v2.0_Chr2g0091291 Rosa chinensis HOM05D003644 ORTHO05D004305 3.9e-15 85.9 160 48.8
Oeu002262.2 Olea europaea HOM05D003644 ORTHO05D004305 5.1e-15 85.5 166 40.4
Aa31LG2G21540 Aethionema arabicum HOM05D003644 ORTHO05D004305 6.7e-15 85.1 174 44.8
EL10Ac8g18428 Beta vulgaris HOM05D003644 ORTHO05D004305 6.7e-15 85.1 213 39.0
Hund09226 Selenicereus undatus HOM05D003644 ORTHO05D004305 8.8e-15 84.7 196 38.3
Actinidia20403 Actinidia chinensis HOM05D003644 ORTHO05D004305 1.1e-14 84.3 200 42.5
HanXRQChr12g0358181 Helianthus annuus HOM05D003644 ORTHO05D004305 2.0e-14 83.6 165 32.7
BolC7t40541H Brassica oleracea HOM05D003644 ORTHO05D004305 2.5e-14 83.2 209 35.4
Carub.0003s3436 Capsella rubella HOM05D003644 ORTHO05D004305 2.5e-14 83.2 174 38.5
Actinidia09436 Actinidia chinensis HOM05D003644 ORTHO05D004305 4.3e-14 82.4 209 43.5
Hund26238 Selenicereus undatus HOM05D003644 ORTHO05D004305 7.4e-14 81.6 206 35.9
Solyc12g007240.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 1.3e-13 80.9 147 39.5
Nitab4.5_0014820g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 1.7e-13 80.5 154 39.6
Sc08g0007690 Simmondsia chinensis HOM05D003644 ORTHO05D004305 1.7e-13 80.5 206 36.9
Eucgr.C01280 Eucalyptus grandis HOM05D003644 ORTHO05D004305 2.4e-12 76.6 206 40.3
A07p00580 Brassica napus HOM05D003644 ORTHO05D004305 5.3e-12 75.5 148 40.5
Zm00001eb360290 Zea mays HOM05D003644 ORTHO05D004305 6.9e-12 75.1 210 38.1
HanXRQChr14g0449921 Helianthus annuus HOM05D003644 ORTHO05D004305 9.1e-12 74.7 165 35.2
Aa31LG8G17030 Aethionema arabicum HOM05D003644 ORTHO05D004305 1.5e-11 73.9 145 40.7
Actinidia32668 Actinidia chinensis HOM05D003644 ORTHO05D004305 2.6e-11 73.2 150 38.7
BcaNung04091 Brassica carinata HOM05D003644 ORTHO05D004305 2.6e-11 73.2 208 37.0
DCAR_010477 Daucus carota HOM05D003644 ORTHO05D004305 7.7e-11 71.6 209 31.6
C09p15050 Brassica napus HOM05D003644 ORTHO05D004305 1.0e-10 71.2 168 39.3
BcaB03g16807 Brassica carinata HOM05D003644 ORTHO05D004305 6.5e-10 68.6 75 52.0
C07p01040 Brassica napus HOM05D003644 ORTHO05D004305 6.5e-10 68.6 217 32.7
BraA07t27854Z Brassica rapa HOM05D003644 ORTHO05D004305 6.5e-10 68.6 118 42.4
BcaC06g36690 Brassica carinata HOM05D003644 ORTHO05D004305 8.5e-10 68.2 117 44.4
TPR.G23503 Trifolium pratense HOM05D003644 ORTHO05D004305 1.4e-09 67.4 165 38.2
Ah.09g230900 Amaranthus hybridus HOM05D003644 ORTHO05D004305 2.5e-09 66.6 192 35.4
BcaC07g41225 Brassica carinata HOM05D003644 ORTHO05D004305 3.2e-09 66.2 187 33.2
Lsat_1_v5_gn_5_147641 Lactuca sativa HOM05D003644 ORTHO05D004305 3.2e-09 66.2 127 50.4
BcaB08g34898 Brassica carinata HOM05D003644 ORTHO05D004305 5.5e-09 65.5 189 32.8
Nitab4.5_0001004g0030 Nicotiana tabacum HOM05D003644 ORTHO05D004305 5.5e-09 65.5 131 39.7
AT2G20080 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 7.2e-09 65.1 205 32.7
A09p12690 Brassica napus HOM05D003644 ORTHO05D004305 9.4e-09 64.7 189 35.4
Lalb_Chr16g0388081 Lupinus albus HOM05D003644 ORTHO05D004305 9.4e-09 64.7 78 51.3
Psat7g014640 Pisum sativum HOM05D003644 ORTHO05D004305 1.2e-08 64.3 164 36.0
Zm00001eb343410 Zea mays HOM05D003644 ORTHO05D004305 2.1e-08 63.5 184 32.6
BcaC04g22808 Brassica carinata HOM05D003644 ORTHO05D004305 2.7e-08 63.2 185 35.7
BolC9t54408H Brassica oleracea HOM05D003644 ORTHO05D004305 2.7e-08 63.2 185 35.7
Nitab4.5_0002431g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 4.7e-08 62.4 93 41.9
Thhalv10026355m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 6.1e-08 62.0 203 32.0
Zm00001eb156860 Zea mays HOM05D003644 ORTHO05D004305 1.4e-07 60.8 169 34.9
HPP92_019983 Vanilla planifolia HOM05D003644 ORTHO05D004305 1.1e-06 57.8 205 33.2
Sc08g0007700 Simmondsia chinensis HOM05D003644 ORTHO05D004305 2.0e-06 57.0 160 28.1
COL.COLO4_17464 Corchorus olitorius HOM05D003644 ORTHO05D004305 2.6e-06 56.6 161 37.3


User provided reference genes

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