Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO566G0204 Papaver somniferum HOM05D008241 ORTHO05D026747 1.3e-148 529.6 259 100.0
PSO782G1678 Papaver somniferum HOM05D008241 ORTHO05D026747 2.0e-72 276.6 248 63.3
PSO384G3471 Papaver somniferum HOM05D008241 ORTHO05D011047 6.1e-45 185.3 249 45.8
PSO017G1532 Papaver somniferum HOM05D008241 ORTHO05D011047 5.1e-44 182.2 265 44.2
PSO170G1530 Papaver somniferum HOM05D008241 ORTHO05D302597 5.1e-44 182.2 222 50.0
PSO210G6948 Papaver somniferum HOM05D008241 ORTHO05D011047 8.8e-44 181.4 258 47.3
PSO478G0839 Papaver somniferum HOM05D008241 ORTHO05D011047 8.8e-44 181.4 271 41.7
PSO782G0305 Papaver somniferum HOM05D008241 ORTHO05D011047 5.7e-43 178.7 269 42.4
PSO478G0897 Papaver somniferum HOM05D008241 ORTHO05D011047 6.3e-42 175.3 256 42.6
PSO170G5047 Papaver somniferum HOM05D008241 ORTHO05D012447 2.2e-39 166.8 228 45.2
PSO170G2930 Papaver somniferum HOM05D008241 ORTHO05D011047 3.8e-39 166.0 238 45.4
PSO407G0018 Papaver somniferum HOM05D008241 ORTHO05D011047 2.5e-38 163.3 263 42.6
PSO478G4752 Papaver somniferum HOM05D008241 ORTHO05D011047 3.2e-38 162.9 266 40.6
PSO063G1529 Papaver somniferum HOM05D008241 ORTHO05D011047 1.6e-37 160.6 231 46.3
PSO478G2904 Papaver somniferum HOM05D008241 ORTHO05D011047 4.4e-35 152.5 265 41.1
PSO170G1077 Papaver somniferum HOM05D008241 ORTHO05D012447 9.7e-35 151.4 247 40.1
PSO478G4570 Papaver somniferum HOM05D008241 ORTHO05D011047 4.8e-34 149.1 240 46.2
PSO017G7197 Papaver somniferum HOM05D008241 ORTHO05D011047 7.0e-33 145.2 139 55.4
PSO063G0360 Papaver somniferum HOM05D008241 ORTHO05D011047 1.9e-30 137.1 229 42.8
PSO017G6622 Papaver somniferum HOM05D008241 ORTHO05D011047 1.4e-28 131.0 316 31.6
PSO591G0070 Papaver somniferum HOM05D008241 ORTHO05D305592 3.4e-27 126.3 129 53.5
PSO832G0583 Papaver somniferum HOM05D008241 ORTHO05D011047 8.3e-26 121.7 237 37.1
PSO017G0729 Papaver somniferum HOM05D008241 ORTHO05D302665 4.1e-25 119.4 135 48.9
PSO017G4336 Papaver somniferum HOM05D008241 ORTHO05D024747 4.5e-24 115.9 130 48.5
PSO478G3463 Papaver somniferum HOM05D008241 ORTHO05D304507 9.4e-22 108.2 246 33.3
PSO017G0775 Papaver somniferum HOM05D008241 ORTHO05D024747 2.3e-20 103.6 134 46.3
PSO455G0153 Papaver somniferum HOM05D008241 ORTHO05D305573 8.8e-20 101.7 129 46.5
PSO173G0050 Papaver somniferum HOM05D008241 ORTHO05D011047 1.3e-18 97.8 256 34.8
PSO170G0477 Papaver somniferum HOM05D008241 ORTHO05D302550 9.1e-17 91.7 106 48.1
PSO170G3050 Papaver somniferum HOM05D008241 ORTHO05D011047 1.6e-16 90.9 176 36.4
PSO832G1766 Papaver somniferum HOM05D008241 ORTHO05D011047 1.0e-15 88.2 270 33.0
PSO782G0882 Papaver somniferum HOM05D008241 ORTHO05D011047 1.7e-15 87.4 270 31.5
PSO676G0002 Papaver somniferum HOM05D008241 ORTHO05D305185 2.9e-15 86.7 270 33.3
PSO138G0001 Papaver somniferum HOM05D008241 ORTHO05D304463 8.6e-15 85.1 270 33.0
PSO013G0239 Papaver somniferum HOM05D008241 ORTHO05D303726 5.5e-14 82.4 221 32.1
PSO591G0229 Papaver somniferum HOM05D008241 ORTHO05D011047 1.2e-13 81.3 272 30.9
PSO240G0002 Papaver somniferum HOM05D008241 ORTHO05D011047 4.0e-12 76.3 84 53.6
Dinv16557 Davidia involucrata HOM05D000007 ORTHO05D009073 1.7e-10 70.9 219 28.8
PSO384G0078 Papaver somniferum HOM05D008241 ORTHO05D011047 2.8e-10 70.1 241 26.1
PSO170G5628 Papaver somniferum HOM05D018196 ORTHO05D011047 1.4e-09 67.8 261 27.6
PSO302G0254 Papaver somniferum HOM05D008241 ORTHO05D011047 1.4e-09 67.8 203 29.1
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 3.2e-09 66.6 196 29.6
CiPaw.07G037700 Carya illinoinensis HOM05D000007 ORTHO05D000017 9.2e-09 65.1 238 26.1
PSO135G0186 Papaver somniferum HOM05D008241 ORTHO05D304240 1.2e-08 64.7 233 28.8
Prupe.6G214900 Prunus persica HOM05D000007 ORTHO05D000017 1.6e-08 64.3 163 31.3
Aqoxy5G04172 Aquilegia oxysepala HOM05D000007 ORTHO05D026747 2.0e-08 63.9 197 31.0
Prupe.6G214700 Prunus persica HOM05D000007 ORTHO05D000017 5.9e-08 62.4 202 28.2
AUR62016381 Chenopodium quinoa HOM05D000007 ORTHO05D000039 7.8e-08 62.0 201 29.9
PSO017G3008 Papaver somniferum HOM05D008241 ORTHO05D011047 1.0e-07 61.6 228 28.1
Lj6C661G23 Lonicera japonica HOM05D000007 ORTHO05D000017 1.3e-07 61.2 196 28.1
FAN19G0280 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.7e-07 60.8 249 26.9
PSO063G0605 Papaver somniferum HOM05D008241 ORTHO05D302982 1.7e-07 60.8 55 60.0
Medtr3g014540 Medicago truncatula HOM05D000007 ORTHO05D000017 2.3e-07 60.5 189 28.0
PSO170G4320 Papaver somniferum HOM05D008241 ORTHO05D305433 3.9e-07 59.7 32 78.1
vmacro12403 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 3.9e-07 59.7 211 28.9
MBI19_g35552_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000017 6.6e-07 58.9 189 28.0
PSO170G3876 Papaver somniferum HOM05D008241 ORTHO05D302033 6.6e-07 58.9 58 51.7
Rhsim08G0032700 Rhododendron simsii HOM05D015868 ORTHO05D013379 6.6e-07 58.9 186 25.8
Sc25g0005500 Simmondsia chinensis HOM05D000007 ORTHO05D000017 8.6e-07 58.5 230 25.2
HanXRQChr07g0189381 Helianthus annuus HOM05D000007 ORTHO05D009073 1.1e-06 58.2 209 26.8
Lju414C1T10 Lonicera japonica HOM05D000007 ORTHO05D000017 1.1e-06 58.2 220 28.2
Medtr3g014570 Medicago truncatula HOM05D000007 ORTHO05D000017 1.1e-06 58.2 189 27.5
Eucgr.B03075 Eucalyptus grandis HOM05D000171 ORTHO05D000101 1.5e-06 57.8 193 27.5
FAN21G1277 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.5e-06 57.8 208 26.4
PSO675G4253 Papaver somniferum HOM05D008241 ORTHO05D304092 1.5e-06 57.8 104 36.5
Peaxi162Scf01162g00033 Petunia axillaris HOM05D000007 ORTHO05D000039 1.5e-06 57.8 185 24.9
Lj3C598T2 Lonicera japonica HOM05D000007 ORTHO05D000039 1.9e-06 57.4 194 28.4
Nitab4.5_0000059g0520 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.9e-06 57.4 204 23.5
arahy.Tifrunner.gnm1.ann1.M84CU1 Arachis hypogaea HOM05D000007 ORTHO05D000017 2.5e-06 57.0 272 25.4
arahy.Tifrunner.gnm1.ann1.MMWN9B Arachis hypogaea HOM05D000007 ORTHO05D000017 2.5e-06 57.0 272 25.4
CAN.G1096.1 Capsicum annuum HOM05D000007 ORTHO05D000017 2.5e-06 57.0 195 26.2
MBI19_g00242_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 2.5e-06 57.0 175 29.1
Psat5g160200 Pisum sativum HOM05D000007 ORTHO05D000017 2.5e-06 57.0 201 27.9
Nitab4.5_0005464g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.3e-06 56.2 250 23.6
FAN25G2493 Fragaria x ananassa HOM05D000007 ORTHO05D000017 5.6e-06 55.8 192 27.1
TPR.G19014 Trifolium pratense HOM05D000007 ORTHO05D000017 5.6e-06 55.8 190 27.9
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 5.6e-06 55.8 192 29.7
COL.COLO4_14583 Corchorus olitorius HOM05D000007 ORTHO05D000017 7.3e-06 55.5 254 25.6
FAN16G0625 Fragaria x ananassa HOM05D000007 ORTHO05D045626 7.3e-06 55.5 176 27.3
Prupe.6G093100 Prunus persica HOM05D000007 ORTHO05D009073 7.3e-06 55.5 203 25.6
RcHm_v2.0_Chr2g0109781 Rosa chinensis HOM05D000007 ORTHO05D000017 7.3e-06 55.5 66 42.4
TPR.G29063 Trifolium pratense HOM05D000007 ORTHO05D000039 7.3e-06 55.5 218 23.4
TWI09G0417 Tripterygium wilfordii HOM05D000007 ORTHO05D000017 7.3e-06 55.5 196 27.6
Actinidia30171 Actinidia chinensis HOM05D000007 ORTHO05D009073 9.5e-06 55.1 230 29.1
CSS0024527 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 9.5e-06 55.1 243 25.5


User provided reference genes

Program Settings