Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 1.3e-193 679.5 324 100.0
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 2.0e-186 655.6 313 99.7
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 6.0e-167 590.9 305 88.9
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 1.7e-166 589.3 308 89.6
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 1.9e-165 585.9 305 88.5
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 2.5e-165 585.5 310 87.1
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 5.6e-165 584.3 310 87.1
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 7.3e-165 583.9 313 86.3
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.3e-164 583.2 310 87.1
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 1.3e-164 583.2 312 85.6
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 1.6e-164 582.8 305 88.5
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 3.6e-164 581.6 311 86.2
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 3.6e-164 581.6 305 88.2
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 1.4e-163 579.7 305 87.5
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 2.4e-163 578.9 313 86.3
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 4.0e-163 578.2 310 87.4
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 5.3e-163 577.8 308 88.0
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 5.3e-163 577.8 309 87.4
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 1.2e-162 576.6 305 86.9
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 4.5e-162 574.7 305 88.5
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 7.6e-162 573.9 310 86.1
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 2.2e-161 572.4 310 84.5
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 4.9e-161 571.2 299 88.0
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 4.9e-161 571.2 313 84.3
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 1.1e-160 570.1 304 86.8
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 1.4e-160 569.7 313 85.0
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 2.4e-160 568.9 314 83.8
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 3.2e-160 568.5 310 83.2
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 3.2e-160 568.5 305 85.6
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 3.2e-160 568.5 318 82.4
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 4.2e-160 568.2 310 83.9
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 7.1e-160 567.4 309 83.8
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 9.3e-160 567.0 303 85.1
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.8e-158 562.8 310 84.5
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 3.0e-158 562.0 305 85.9
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 3.9e-158 561.6 317 82.0
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 8.7e-158 560.5 306 84.6
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 1.9e-157 559.3 305 83.0
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 7.4e-157 557.4 306 83.7
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 1.6e-156 556.2 303 85.5
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 2.8e-156 555.4 305 85.2
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 8.1e-156 553.9 310 84.2
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 1.1e-155 553.5 309 83.2
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 9.0e-155 550.4 305 82.6
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 2.0e-154 549.3 306 83.7
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 9.9e-154 547.0 305 84.6
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 9.9e-154 547.0 298 86.6
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 1.3e-153 546.6 320 79.4
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 1.3e-153 546.6 305 81.6
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 1.4e-152 543.1 323 79.9
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 3.2e-152 542.0 323 79.6
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 3.2e-152 542.0 323 79.6
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 3.2e-152 542.0 323 79.6
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 7.1e-152 540.8 300 83.7
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 2.7e-151 538.9 323 79.3
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 7.9e-151 537.3 311 81.0
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 7.9e-151 537.3 310 81.0
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 6.7e-150 534.3 305 81.6
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 1.5e-149 533.1 305 82.3
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 2.5e-149 532.3 305 82.0
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 2.1e-148 529.3 308 80.2
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 1.4e-147 526.6 305 82.6
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 1.5e-146 523.1 306 80.4
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 2.0e-146 522.7 305 80.3
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 5.5e-144 514.6 415 64.1
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 7.1e-144 514.2 289 83.4
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 2.7e-143 512.3 362 69.3
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 1.8e-142 509.6 306 78.4
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 6.7e-142 507.7 306 76.1
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 1.5e-138 496.5 265 86.4
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 4.5e-138 495.0 269 85.9
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 9.4e-136 487.3 268 85.4
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 2.8e-132 475.7 293 76.8
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 3.2e-128 462.2 304 73.0
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 3.6e-127 458.8 324 68.2
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 3.7e-124 448.7 258 81.4
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 5.9e-122 441.4 310 69.7
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 1.3e-121 440.3 303 70.3
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 3.8e-121 438.7 309 64.1
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 1.1e-117 427.2 251 79.7
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 7.5e-109 397.9 338 61.2
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 2.7e-98 362.8 306 62.1
Nitab4.5_0009876g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 8.0e-95 351.3 183 88.5
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 8.9e-94 347.8 274 63.5
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 7.3e-88 328.2 186 83.3
Lsat_1_v5_gn_4_18721 Lactuca sativa HOM05D005968 ORTHO05D007158 6.1e-87 325.1 184 79.9
Lalb_Chr12g0198711 Lupinus albus HOM05D005968 ORTHO05D007158 9.8e-85 317.8 162 89.5
Oeu038140.1 Olea europaea HOM05D005968 ORTHO05D007158 9.8e-85 317.8 165 87.9
GSVIVG01023606001 Vitis vinifera HOM05D005968 ORTHO05D007158 2.2e-84 316.6 167 88.6
Cpa.g.sc46.157 Carica papaya HOM05D005968 ORTHO05D007158 2.9e-84 316.2 170 85.9
TPR.G24830 Trifolium pratense HOM05D005968 ORTHO05D007158 2.9e-84 316.2 162 88.3
Sc17g0006690 Simmondsia chinensis HOM05D005968 ORTHO05D007158 3.2e-83 312.8 160 90.0
MSTRG.26272 Avicennia marina HOM05D005968 ORTHO05D007158 4.1e-83 312.4 162 87.7
CAN.G160.61 Capsicum annuum HOM05D005968 ORTHO05D007158 4.1e-83 312.4 163 87.7
Medtr4g130830 Medicago truncatula HOM05D005968 ORTHO05D007158 4.1e-83 312.4 162 88.3
Cc06_g14950 Coffea canephora HOM05D005968 ORTHO05D007158 2.0e-82 310.1 162 87.7
Eucgr.C02540 Eucalyptus grandis HOM05D005968 ORTHO05D007158 3.5e-82 309.3 167 84.4
FAN28G0447 Fragaria x ananassa HOM05D005968 ORTHO05D007158 3.5e-82 309.3 167 84.4
RcHm_v2.0_Chr2g0085611 Rosa chinensis HOM05D005968 ORTHO05D007158 3.5e-82 309.3 167 84.4
Sopen07g001720 Solanum pennellii HOM05D005968 ORTHO05D007158 5.0e-81 305.4 163 85.3
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 2.6e-77 293.1 241 54.8
vmacro06082 Vaccinium macrocarpon HOM05D005968 ORTHO05D007158 4.6e-74 282.3 179 75.4
Haze_19205 Corylus avellana HOM05D005968 ORTHO05D007158 2.2e-68 263.5 134 88.8
GSVIVG01023605001 Vitis vinifera HOM05D005968 ORTHO05D007158 7.6e-61 238.4 123 89.4
Lalb_Chr12g0198701 Lupinus albus HOM05D005968 ORTHO05D007158 9.9e-61 238.0 123 87.8
TPR.G24874 Trifolium pratense HOM05D005968 ORTHO05D007158 1.7e-60 237.3 123 86.2
Medtr4g130840 Medicago truncatula HOM05D005968 ORTHO05D007158 1.9e-59 233.8 123 84.6
Dinv43246 Davidia involucrata HOM05D005968 ORTHO05D007158 3.0e-57 226.5 122 86.1
ClCG06G012410 Citrullus lanatus HOM05D005968 ORTHO05D007158 1.9e-56 223.8 123 84.6
MELO3C010224.2 Cucumis melo HOM05D005968 ORTHO05D007158 1.9e-56 223.8 123 84.6
Oeu038141.1 Olea europaea HOM05D005968 ORTHO05D007158 3.3e-56 223.0 123 82.9
Cc06_g14960 Coffea canephora HOM05D005968 ORTHO05D007158 2.1e-55 220.3 123 82.1
Sopen07g001730 Solanum pennellii HOM05D005968 ORTHO05D007158 4.8e-55 219.2 123 81.3
RcHm_v2.0_Chr2g0085621 Rosa chinensis HOM05D005968 ORTHO05D007158 8.1e-55 218.4 122 81.1
Solyc07g005620.2 Solanum lycopersicum HOM05D005968 ORTHO05D007158 1.1e-54 218.0 123 80.5
RhsimUnG0158300 Rhododendron simsii HOM05D005968 ORTHO05D001263 5.3e-54 215.7 122 78.7
Cpa.g.sc46.156 Carica papaya HOM05D005968 ORTHO05D007158 2.2e-52 210.3 143 72.7
Os05g0279600 Oryza sativa ssp. japonica HOM05D005968 ORTHO05D007158 2.2e-52 210.3 124 76.6
TAR636G1721 Trochodendron aralioides HOM05D005968 ORTHO05D007158 1.1e-51 208.0 108 88.0
Aa31LG2G19470 Aethionema arabicum HOM05D005968 ORTHO05D007158 7.1e-51 205.3 117 78.6
HPP92_004698 Vanilla planifolia HOM05D005968 ORTHO05D007158 2.1e-50 203.8 124 78.2
HPP92_004697 Vanilla planifolia HOM05D005968 ORTHO05D007158 2.8e-47 193.4 104 81.7
CDE04G1812 Ceratophyllum demersum HOM05D005968 ORTHO05D007158 1.1e-35 154.8 89 76.4
arahy.Tifrunner.gnm1.ann1.HW7BNQ Arachis hypogaea HOM05D005968 ORTHO05D007158 4.3e-32 142.9 69 94.2
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 5.7e-32 142.5 254 36.2
TAR636G0142 Trochodendron aralioides HOM05D002374 ORTHO05D003594 4.5e-29 132.9 71 87.3
Lsat_1_v5_gn_4_18741 Lactuca sativa HOM05D005968 ORTHO05D007158 2.9e-28 130.2 79 75.9
Nitab4.5_0006121g0010 Nicotiana tabacum HOM05D005968 ORTHO05D007158 2.1e-26 124.0 66 86.4
Eucgr.C02541 Eucalyptus grandis HOM05D005968 ORTHO05D007158 6.5e-20 102.4 71 70.4
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 4.3e-16 89.7 52 76.9
arahy.Tifrunner.gnm1.ann1.QXT71M Arachis hypogaea HOM05D005968 ORTHO05D007158 7.4e-16 89.0 49 79.6
arahy.Tifrunner.gnm1.ann1.VCSM30 Arachis hypogaea HOM05D005968 ORTHO05D007158 8.2e-15 85.5 47 83.0
arahy.Tifrunner.gnm1.ann1.HGKJ8P Arachis hypogaea HOM05D005968 ORTHO05D007158 1.9e-11 74.3 40 82.5
Haze_19213 Corylus avellana HOM05D000344 ORTHO05D005296 9.4e-11 72.0 34 91.2
Oeu038782.2 Olea europaea HOM05D005968 ORTHO05D007158 1.3e-07 61.6 46 63.0


User provided reference genes

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