Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO561G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 9.4e-59 229.9 113 100.0
PSO111G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 9.7e-56 219.9 113 96.5
TAR626G1228 Trochodendron aralioides HOM05D006119 ORTHO05D007641 2.1e-42 175.6 111 75.7
TAR625G1054 Trochodendron aralioides HOM05D006119 ORTHO05D007641 4.7e-42 174.5 111 75.7
Migut.K00337 Erythranthe guttata HOM05D006119 ORTHO05D007641 5.7e-40 167.5 112 68.8
MBI15_g26716_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 5.7e-40 167.5 114 70.2
SGA_v2.0_scaffold206G41813 Striga asiatica HOM05D006119 ORTHO05D007641 1.7e-39 166.0 111 70.3
Hma1.2p1_0028F.1_g017420 Hydrangea macrophylla HOM05D006119 ORTHO05D007641 2.8e-39 165.2 112 68.8
CSS0002774 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 3.7e-39 164.9 112 69.6
CSS0027400 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 3.7e-39 164.9 112 69.6
Oeu038007.1 Olea europaea HOM05D006119 ORTHO05D007641 3.7e-39 164.9 111 70.3
Peaxi162Scf00347g01022 Petunia axillaris HOM05D006119 ORTHO05D007641 4.8e-39 164.5 112 67.9
Sopen12g005020 Solanum pennellii HOM05D006119 ORTHO05D007641 1.1e-38 163.3 100 78.0
Sopen07g001370 Solanum pennellii HOM05D006119 ORTHO05D007641 1.8e-38 162.5 112 67.9
CiPaw.15G174900 Carya illinoinensis HOM05D006119 ORTHO05D007641 5.4e-38 161.0 112 66.1
Haze_19227 Corylus avellana HOM05D006119 ORTHO05D007641 5.4e-38 161.0 111 67.6
Solyc12g010150.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 7.0e-38 160.6 99 77.8
PGSC0003DMG400007897 Solanum tuberosum HOM05D006119 ORTHO05D007641 9.1e-38 160.2 100 76.0
Cfa020842 Carpinus fangiana HOM05D006119 ORTHO05D007641 1.2e-37 159.8 111 66.7
Lsat_1_v5_gn_5_91501 Lactuca sativa HOM05D006119 ORTHO05D007641 1.2e-37 159.8 111 69.4
arahy.Tifrunner.gnm1.ann1.I28AR0 Arachis hypogaea HOM05D006119 ORTHO05D007641 1.6e-37 159.5 112 65.2
Nitab4.5_0004815g0030 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.6e-37 159.5 134 59.7
Solyc07g005410.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 1.6e-37 159.5 112 67.0
GSVIVG01023584001 Vitis vinifera HOM05D006119 ORTHO05D007641 1.6e-37 159.5 100 76.0
HPP92_017474 Vanilla planifolia HOM05D006119 ORTHO05D007641 2.0e-37 159.1 100 71.0
Manes.06G037000 Manihot esculenta HOM05D006119 ORTHO05D007641 3.5e-37 158.3 112 67.0
AL8G34100 Arabidopsis lyrata HOM05D006119 ORTHO05D007641 4.5e-37 157.9 112 65.2
CDE05G1219 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 4.5e-37 157.9 112 66.1
Peaxi162Scf00062g00419 Petunia axillaris HOM05D006119 ORTHO05D007641 5.9e-37 157.5 100 75.0
AT5G58005 Arabidopsis thaliana HOM05D006119 ORTHO05D007641 7.7e-37 157.1 112 65.2
Zm00001eb041130 Zea mays HOM05D006119 ORTHO05D007641 1.0e-36 156.8 98 71.4
PGR102G3064 Punica granatum HOM05D006119 ORTHO05D007641 1.3e-36 156.4 112 67.0
QL02p092825 Quercus lobata HOM05D006119 ORTHO05D007641 1.3e-36 156.4 111 64.9
arahy.Tifrunner.gnm1.ann1.TAM15G Arachis hypogaea HOM05D006119 ORTHO05D007641 1.7e-36 156.0 111 64.9
Potri.006G186500 Populus trichocarpa HOM05D006119 ORTHO05D007641 2.2e-36 155.6 112 65.2
Carub.0008s1855 Capsella rubella HOM05D006119 ORTHO05D007641 2.9e-36 155.2 112 63.4
Gorai.009G055300 Gossypium raimondii HOM05D006119 ORTHO05D007641 2.9e-36 155.2 112 64.3
Actinidia23551 Actinidia chinensis HOM05D006119 ORTHO05D007641 3.8e-36 154.8 112 64.3
Nn8g39847 Nelumbo nucifera HOM05D006119 ORTHO05D007641 3.8e-36 154.8 100 74.0
Oeu021261.1 Olea europaea HOM05D006119 ORTHO05D007641 6.5e-36 154.1 99 73.7
RhsimUnG0039700 Rhododendron simsii HOM05D006119 ORTHO05D007641 6.5e-36 154.1 106 67.0
Hund00673 Selenicereus undatus HOM05D006119 ORTHO05D007641 6.5e-36 154.1 110 64.5
CARHR271810 Cardamine hirsuta HOM05D006119 ORTHO05D007641 1.1e-35 153.3 112 62.5
Thecc.09G032800 Theobroma cacao HOM05D006119 ORTHO05D007641 1.1e-35 153.3 112 65.2
Aa31LG3G13820 Aethionema arabicum HOM05D006119 ORTHO05D007641 1.5e-35 152.9 112 62.5
Thhalv10015049m.g Eutrema salsugineum HOM05D006119 ORTHO05D007641 3.2e-35 151.8 112 62.5
SalBow1G1238 Salvia bowleyana HOM05D006119 ORTHO05D007641 3.2e-35 151.8 100 69.0
ATR0739G093 Amborella trichopoda HOM05D006119 ORTHO05D007641 4.2e-35 151.4 100 68.0
BcaB01g04471 Brassica carinata HOM05D006119 ORTHO05D007641 5.5e-35 151.0 112 61.6
Potri.018G109400 Populus trichocarpa HOM05D006119 ORTHO05D007641 7.2e-35 150.6 112 63.4
Dinv42873 Davidia involucrata HOM05D006119 ORTHO05D007641 9.5e-35 150.2 100 70.0
Dinv43227 Davidia involucrata HOM05D006119 ORTHO05D007641 9.5e-35 150.2 100 70.0
Lj4g0015042 Lotus japonicus HOM05D006119 ORTHO05D007641 9.5e-35 150.2 112 65.2
Sabra18G0092300 Salix brachista HOM05D006119 ORTHO05D007641 1.2e-34 149.8 112 61.6
Aqoxy7G03440 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 1.6e-34 149.4 99 68.7
C03p14650 Brassica napus HOM05D006119 ORTHO05D007641 1.6e-34 149.4 112 61.6
Sed0003082 Sechium edule HOM05D006119 ORTHO05D007641 1.6e-34 149.4 112 60.7
Ciclev10009941m.g Citrus clementina HOM05D006119 ORTHO05D007641 2.1e-34 149.1 112 62.5
Ca_21116_v3 Cicer arietinum L. HOM05D006119 ORTHO05D007641 3.6e-34 148.3 112 62.5
Cc06_g15170 Coffea canephora HOM05D006119 ORTHO05D007641 3.6e-34 148.3 100 69.0
ClCG06G012280 Citrullus lanatus HOM05D006119 ORTHO05D007641 4.7e-34 147.9 112 59.8
Os08g0441400 Oryza sativa ssp. japonica HOM05D006119 ORTHO05D007641 4.7e-34 147.9 103 64.1
vmacro06086 Vaccinium macrocarpon HOM05D006119 ORTHO05D007641 4.7e-34 147.9 123 59.3
A03p12450 Brassica napus HOM05D000882 ORTHO05D001142 1.0e-33 146.7 106 63.2
BolC3t13907H Brassica oleracea HOM05D000882 ORTHO05D001142 1.0e-33 146.7 106 63.2
BraA03t10560Z Brassica rapa HOM05D000882 ORTHO05D001142 1.0e-33 146.7 106 63.2
ECA234G1280 Erigeron canadensis HOM05D006119 ORTHO05D007641 1.0e-33 146.7 106 64.2
MELO3C029440.2 Cucumis melo HOM05D006119 ORTHO05D007641 1.8e-33 146.0 123 57.7
Eucgr.C02591 Eucalyptus grandis HOM05D006119 ORTHO05D007641 1.8e-33 146.0 110 60.9
Eucgr.L03135 Eucalyptus grandis HOM05D006119 ORTHO05D007641 1.8e-33 146.0 108 61.1
Medtr4g131150 Medicago truncatula HOM05D006119 ORTHO05D007641 1.8e-33 146.0 114 64.0
Actinidia04288 Actinidia chinensis HOM05D006119 ORTHO05D007641 2.3e-33 145.6 100 68.0
Nitab4.5_0006408g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 3.0e-33 145.2 86 74.4
Rhsim03G0256600 Rhododendron simsii HOM05D006119 ORTHO05D007641 3.0e-33 145.2 128 59.4
CAN.G1116.12 Capsicum annuum HOM05D006119 ORTHO05D007641 4.0e-33 144.8 98 68.4
Glyma.02G202700 Glycine max HOM05D006119 ORTHO05D007641 5.2e-33 144.4 100 68.0
MSTRG.26287 Avicennia marina HOM05D006119 ORTHO05D007641 6.8e-33 144.1 100 67.0
COL.COLO4_18789 Corchorus olitorius HOM05D006119 ORTHO05D007641 2.0e-32 142.5 108 61.1
Lalb_Chr07g0179791 Lupinus albus HOM05D006119 ORTHO05D007641 2.6e-32 142.1 100 64.0
Atru.chr7.85 Acer truncatum HOM05D006119 ORTHO05D007641 3.4e-32 141.7 107 62.6
TPR.G39188 Trifolium pratense HOM05D006119 ORTHO05D007641 4.4e-32 141.4 115 61.7
Cpa.g.sc46.139 Carica papaya HOM05D006119 ORTHO05D007641 1.3e-31 139.8 100 63.0
FvH4_1g01100 Fragaria vesca HOM05D006119 ORTHO05D007641 1.7e-31 139.4 112 57.1
FAN19G0026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 1.7e-31 139.4 112 57.1
Gohir.A05G052000 Gossypium hirsutum HOM05D006119 ORTHO05D007641 1.7e-31 139.4 100 65.0
Gohir.D05G053500 Gossypium hirsutum HOM05D006119 ORTHO05D007641 2.2e-31 139.0 100 65.0
Duzib187G0693 Durio zibethinus HOM05D006119 ORTHO05D007641 2.8e-31 138.7 104 63.5
FAN26G3335 Fragaria x ananassa HOM05D006119 ORTHO05D007641 2.8e-31 138.7 112 57.1
FAN28G1026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 2.8e-31 138.7 112 57.1
FAN23G1211 Fragaria x ananassa HOM05D006119 ORTHO05D007641 4.9e-31 137.9 112 56.2
Manes.14G112500 Manihot esculenta HOM05D006119 ORTHO05D007641 4.9e-31 137.9 96 65.6
Rhsim01G0035400 Rhododendron simsii HOM05D006119 ORTHO05D007641 6.3e-31 137.5 98 65.3
TWI63G1376 Tripterygium wilfordii HOM05D006119 ORTHO05D007641 1.8e-30 136.0 100 64.0
PGSC0003DMG400011173 Solanum tuberosum HOM05D006119 ORTHO05D007641 7.0e-30 134.0 86 68.6
Psat0ss6646g0160 Pisum sativum HOM05D006119 ORTHO05D007641 9.2e-30 133.7 102 61.8
Actinidia38675 Actinidia chinensis HOM05D006119 ORTHO05D007641 1.2e-29 133.3 90 65.6
CsaV3_1G028790 Cucumis sativus L. HOM05D006119 ORTHO05D007641 1.2e-29 133.3 99 62.6
Prupe.7G260900 Prunus persica HOM05D006119 ORTHO05D007641 2.0e-29 132.5 100 63.0
Sc18g0007620 Simmondsia chinensis HOM05D006119 ORTHO05D007641 2.0e-29 132.5 100 64.0
Nitab4.5_0002315g0130 Nicotiana tabacum HOM05D006119 ORTHO05D007641 2.7e-29 132.1 106 63.2
MD15G1154500 Malus domestica HOM05D006119 ORTHO05D007641 5.9e-29 131.0 100 62.0
Nitab4.5_0001478g0060 Nicotiana tabacum HOM05D006119 ORTHO05D007641 5.9e-29 131.0 106 63.2
unitig_899.g15448 Utricularia gibba HOM05D006119 ORTHO05D007641 5.9e-29 131.0 87 69.0
AUR62043251 Chenopodium quinoa HOM05D006119 ORTHO05D007641 1.0e-28 130.2 107 57.0
DCAR_020878 Daucus carota HOM05D006119 ORTHO05D007641 1.7e-28 129.4 99 63.6
Nitab4.5_0001813g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.7e-28 129.4 111 58.6
CANSAT11G0807 Cannabis sativa HOM05D006119 ORTHO05D007641 2.9e-28 128.6 100 60.0
Phvul.003G157000 Phaseolus vulgaris HOM05D006119 ORTHO05D007641 2.9e-28 128.6 94 62.8
Glyma.17G075100 Glycine max HOM05D006119 ORTHO05D007641 1.2e-26 123.2 85 67.1
MD02G1009100 Malus domestica HOM05D006119 ORTHO05D007641 1.2e-26 123.2 100 60.0
RcHm_v2.0_Chr2g0085901 Rosa chinensis HOM05D006119 ORTHO05D007641 1.2e-26 123.2 100 57.0
Nitab4.5_0013449g0010 Nicotiana tabacum HOM05D006119 ORTHO05D007641 2.1e-26 122.5 96 62.5
Sed0018834 Sechium edule HOM05D006119 ORTHO05D007641 1.0e-25 120.2 85 61.2
EL10Ac8g18851 Beta vulgaris HOM05D006119 ORTHO05D007641 1.4e-25 119.8 92 58.7
Pp3c18_18500 Physcomitrium patens HOM05D006119 ORTHO05D007641 1.8e-25 119.4 106 54.7
HanXRQChr10g0314681 Helianthus annuus HOM05D006119 ORTHO05D007641 2.6e-24 115.5 100 56.0
Mapoly0012s0137 Marchantia polymorpha HOM05D006119 ORTHO05D007641 2.4e-22 109.0 88 55.7
CAN.G551.35 Capsicum annuum HOM05D006119 ORTHO05D007641 3.2e-22 108.6 75 70.7
Pp3c21_10430 Physcomitrium patens HOM05D006119 ORTHO05D007641 7.0e-22 107.5 100 52.0
SMO137G0238 Selaginella moellendorffii HOM05D006119 ORTHO05D007641 4.6e-21 104.8 99 49.5
Aqoxy4G01852 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 2.5e-19 99.0 63 66.7
Sp6g19680 Schrenkiella parvula HOM05D006119 ORTHO05D007641 1.4e-17 93.2 75 56.0
BcaNung07255 Brassica carinata HOM05D000882 ORTHO05D001142 3.1e-17 92.0 60 63.3
SEGI_38164 Sequoiadendron giganteum HOM05D006119 ORTHO05D007641 1.2e-16 90.1 74 55.4
AagrBONN_evm.TU.Sc2ySwM_228.1886 Anthoceros agrestis HOM05D006119 ORTHO05D007641 5.8e-16 87.8 61 62.3
Nitab4.5_0003612g0050 Nicotiana tabacum HOM05D006119 ORTHO05D007641 6.4e-15 84.3 60 63.3
PSO339G5888 Papaver somniferum HOM05D006119 ORTHO05D007641 3.5e-13 78.6 109 44.0
CDE05G1090 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 3.3e-11 72.0 66 54.5
Pp3c22_3250 Physcomitrium patens HOM05D006119 ORTHO05D007641 8.1e-10 67.4 71 45.1
MBI15_g07754_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 2.6e-08 62.4 71 52.1
Rhsim04G0128900 Rhododendron simsii HOM05D002149 ORTHO05D002154 8.3e-07 57.4 36 72.2


User provided reference genes

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