Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO548G0131 Papaver somniferum HOM05D005015 ORTHO05D005696 7.9e-35 149.8 72 100.0
CSS0020927 Camellia sinensis var. sinensis HOM05D005015 ORTHO05D005696 5.0e-21 104.0 57 86.0
Migut.D01335 Erythranthe guttata HOM05D005015 ORTHO05D005696 2.5e-20 101.7 49 95.9
HanXRQChr00c0313g0573431 Helianthus annuus HOM05D000743 ORTHO05D000580 3.2e-20 101.3 54 90.7
HanXRQChr04g0120711 Helianthus annuus HOM05D000743 ORTHO05D000580 3.2e-20 101.3 54 90.7
HanXRQChr08g0210221 Helianthus annuus HOM05D000743 ORTHO05D000580 3.2e-20 101.3 54 90.7
HanXRQChr11g0326651 Helianthus annuus HOM05D000743 ORTHO05D000580 3.2e-20 101.3 54 90.7
HanXRQCPg0579841 Helianthus annuus HOM05D000743 ORTHO05D000580 3.2e-20 101.3 54 90.7
Lsat_1_v5_gn_1_38680 Lactuca sativa HOM05D005015 ORTHO05D005696 5.5e-20 100.5 49 98.0
PGR111G0021 Punica granatum HOM05D005015 ORTHO05D005696 5.5e-20 100.5 48 100.0
Aa31csc39G190 Aethionema arabicum HOM05D005015 ORTHO05D005696 9.3e-20 99.8 57 84.2
Ah.10g027630 Amaranthus hybridus HOM05D005015 ORTHO05D005696 2.7e-19 98.2 49 95.9
EL10As12g24014 Beta vulgaris HOM05D000743 ORTHO05D000580 2.7e-19 98.2 49 95.9
Gohir.D01G157951 Gossypium hirsutum HOM05D005015 ORTHO05D005696 2.7e-19 98.2 49 93.9
Hma1.2p1_0414F.1_g147700 Hydrangea macrophylla HOM05D005015 ORTHO05D005696 3.5e-19 97.8 49 91.8
Hund03959 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund19316 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund27454 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund27640 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund27652 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund27672 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund27697 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund27742 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund27807 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund27824 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund27931 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund27946 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund27994 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund28016 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund28060 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund28129 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund28142 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund28151 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund28161 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund28177 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund28187 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund28210 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund28258 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund28390 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund28502 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund28650 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund28906 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund29887 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund30205 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund30312 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund30436 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund30665 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Hund31017 Selenicereus undatus HOM05D005015 ORTHO05D005696 4.6e-19 97.4 49 93.9
Potri.013G137900 Populus trichocarpa HOM05D005015 ORTHO05D005696 6.1e-19 97.1 48 95.8
CARHR281880 Cardamine hirsuta HOM05D005015 ORTHO05D005696 7.9e-19 96.7 48 95.8
DCAR_032470 Daucus carota HOM05D005015 ORTHO05D005696 1.0e-18 96.3 48 95.8
LjContig00318g0021444 Lotus japonicus HOM05D005015 ORTHO05D005696 1.0e-18 96.3 57 75.4
Sed0007367 Sechium edule HOM05D005015 ORTHO05D005696 1.3e-18 95.9 51 90.2
Sed0025514 Sechium edule HOM05D005015 ORTHO05D005696 1.3e-18 95.9 51 90.2
ATCG00130 Arabidopsis thaliana HOM05D005015 ORTHO05D005696 1.8e-18 95.5 48 93.8
BolSC29t60447H Brassica oleracea HOM05D005015 ORTHO05D005696 1.8e-18 95.5 48 93.8
BolSC37t60772H Brassica oleracea HOM05D005015 ORTHO05D005696 1.8e-18 95.5 48 93.8
BolSC49t61201H Brassica oleracea HOM05D005015 ORTHO05D005696 1.8e-18 95.5 48 93.8
BraSC140t45592Z Brassica rapa HOM05D005015 ORTHO05D005696 1.8e-18 95.5 48 93.8
BraSC143t45677Z Brassica rapa HOM05D005015 ORTHO05D005696 1.8e-18 95.5 48 93.8
Gohir.A10G201450 Gossypium hirsutum HOM05D005015 ORTHO05D005696 1.8e-18 95.5 49 93.9
CAN.G877.4 Capsicum annuum HOM05D005015 ORTHO05D005696 3.9e-18 94.4 50 94.0
MD16G1272100 Malus domestica HOM05D005015 ORTHO05D005696 5.1e-18 94.0 50 90.0
Sed0007878 Sechium edule HOM05D005015 ORTHO05D005696 6.7e-18 93.6 47 93.6
Gohir.D10G206350 Gossypium hirsutum HOM05D005015 ORTHO05D005696 8.7e-18 93.2 48 91.7
HanXRQChr00c0300g0573221 Helianthus annuus HOM05D005015 ORTHO05D005696 8.7e-18 93.2 46 97.8
RcHm_v2.0_CPg0502451 Rosa chinensis HOM05D005015 ORTHO05D005696 2.5e-17 91.7 48 91.7
BolSC46t60983H Brassica oleracea HOM05D005015 ORTHO05D005696 3.3e-17 91.3 47 91.5
LjContig00489g0021854 Lotus japonicus HOM05D005015 ORTHO05D005696 3.3e-17 91.3 48 91.7
Lalb_Chr09g0335321 Lupinus albus HOM05D005015 ORTHO05D005696 5.7e-17 90.5 51 84.3
BraSC151t45691Z Brassica rapa HOM05D005015 ORTHO05D005696 1.6e-16 89.0 46 91.3
Gohir.A10G065880 Gossypium hirsutum HOM05D005015 ORTHO05D005696 2.8e-16 88.2 53 81.1
BolSC29t60569H Brassica oleracea HOM05D005015 ORTHO05D005696 4.8e-16 87.4 44 93.2
Lalb_Chr08g0232621 Lupinus albus HOM05D005015 ORTHO05D005696 8.2e-16 86.7 50 84.0
BolSC45t60933H Brassica oleracea HOM05D005015 ORTHO05D005696 1.1e-15 86.3 50 90.0
HanXRQChr00c0746g0577131 Helianthus annuus HOM05D005015 ORTHO05D005696 1.1e-15 86.3 43 97.7
Peaxi162Scf00379g00087 Petunia axillaris HOM05D005015 ORTHO05D005696 5.3e-15 84.0 39 100.0
Solyc00g500333.1 Solanum lycopersicum HOM05D005015 ORTHO05D005696 5.3e-15 84.0 46 87.0
BolSC45t60880H Brassica oleracea HOM05D005015 ORTHO05D005696 9.0e-15 83.2 41 95.1
BraSC140t45595Z Brassica rapa HOM05D005015 ORTHO05D005696 9.0e-15 83.2 55 74.5
BraSC140t45611Z Brassica rapa HOM05D005015 ORTHO05D005696 9.0e-15 83.2 41 95.1
Solyc00g500322.1 Solanum lycopersicum HOM05D005015 ORTHO05D005696 2.6e-14 81.6 38 100.0
Peaxi162Scf00211g00235 Petunia axillaris HOM05D000743 ORTHO05D005696 4.5e-14 80.9 39 94.9
BolSC44t60844H Brassica oleracea HOM05D005015 ORTHO05D005696 5.9e-14 80.5 47 89.4
HanXRQChr00c0272g0573041 Helianthus annuus HOM05D005015 ORTHO05D005696 1.7e-13 79.0 40 95.0
Lalb_Chr07g0191421 Lupinus albus HOM05D005015 ORTHO05D005696 1.7e-13 79.0 50 76.0
Solyc02g012020.3 Solanum lycopersicum HOM05D005015 ORTHO05D005696 3.8e-13 77.8 44 86.4
Gorai.011G231900 Gossypium raimondii HOM05D005015 ORTHO05D005696 8.5e-13 76.6 42 85.7
Lalb_Chr07g0192191 Lupinus albus HOM05D005015 ORTHO05D005696 1.4e-12 75.9 51 74.5
Nitab4.5_0003775g0050 Nicotiana tabacum HOM05D005015 ORTHO05D005696 1.4e-12 75.9 41 87.8
Solyc10g044535.1 Solanum lycopersicum HOM05D005015 ORTHO05D005696 1.4e-12 75.9 43 86.0
BraSC179t45790Z Brassica rapa HOM05D005015 ORTHO05D005696 5.9e-06 53.9 40 77.5


User provided reference genes

Program Settings