Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G6542 Papaver somniferum HOM05D004875 ORTHO05D005598 0.0e+00 1330.1 675 100.0
PSO541G1704 Papaver somniferum HOM05D004875 ORTHO05D005598 1.6e-222 776.5 670 62.1
PSO532G0016 Papaver somniferum HOM05D004875 ORTHO05D005598 1.1e-218 763.8 658 61.4
PSO541G5558 Papaver somniferum HOM05D004875 ORTHO05D005598 7.3e-191 671.4 681 55.8
FAN16G0994 Fragaria x ananassa HOM05D004875 ORTHO05D005598 3.3e-66 257.3 390 43.3
FAN25G2145 Fragaria x ananassa HOM05D004875 ORTHO05D005598 3.3e-66 257.3 483 38.5
RcHm_v2.0_Chr5g0071641 Rosa chinensis HOM05D004875 ORTHO05D005598 7.3e-66 256.1 390 44.1
FvH4_3g39760 Fragaria vesca HOM05D004875 ORTHO05D005598 9.5e-66 255.8 390 43.3
FAN11G0831 Fragaria x ananassa HOM05D004875 ORTHO05D005598 9.5e-66 255.8 390 43.3
FAN21G2306 Fragaria x ananassa HOM05D004875 ORTHO05D005598 2.8e-65 254.2 390 43.3
Aqoxy1G01286 Aquilegia oxysepala HOM05D004875 ORTHO05D005598 2.6e-63 247.7 392 42.1
MD03G1056500 Malus domestica HOM05D004875 ORTHO05D005598 2.6e-63 247.7 390 43.8
MD11G1058300 Malus domestica HOM05D004875 ORTHO05D005598 1.7e-62 245.0 390 43.3
TAR633G2039 Trochodendron aralioides HOM05D004875 ORTHO05D005598 3.8e-62 243.8 392 42.6
Nn2g11010 Nelumbo nucifera HOM05D004875 ORTHO05D005598 6.4e-62 243.0 390 43.1
CARHR272270 Cardamine hirsuta HOM05D004875 ORTHO05D005598 8.4e-62 242.7 391 41.4
AT5G58450 Arabidopsis thaliana HOM05D004875 ORTHO05D005598 1.1e-61 242.3 391 41.9
Aa31LG11G230 Aethionema arabicum HOM05D004875 ORTHO05D005598 2.4e-61 241.1 391 41.4
QL01p026245 Quercus lobata HOM05D004875 ORTHO05D005598 9.2e-61 239.2 434 38.5
THA.LOC104799387 Tarenaya hassleriana HOM05D004875 ORTHO05D005598 9.2e-61 239.2 392 40.8
Thhalv10012545m.g Eutrema salsugineum HOM05D004875 ORTHO05D005598 1.6e-60 238.4 404 40.6
Sp6g20140 Schrenkiella parvula HOM05D004875 ORTHO05D005598 1.6e-60 238.4 391 40.2
AL8G34640 Arabidopsis lyrata HOM05D004875 ORTHO05D005598 2.1e-60 238.0 391 41.2
Cpa.g.sc2.355 Carica papaya HOM05D004875 ORTHO05D005598 2.7e-60 237.7 390 43.1
Prupe.6G048400 Prunus persica HOM05D004875 ORTHO05D005598 2.7e-60 237.7 390 42.3
BcaC04g19867 Brassica carinata HOM05D004875 ORTHO05D005598 3.5e-60 237.3 391 40.9
BolC9t57888H Brassica oleracea HOM05D004875 ORTHO05D005598 3.5e-60 237.3 391 40.9
TPR.G25698 Trifolium pratense HOM05D004875 ORTHO05D005598 3.5e-60 237.3 393 42.2
A10p15830 Brassica napus HOM05D004875 ORTHO05D005598 1.3e-59 235.3 391 40.7
BraA10t43642Z Brassica rapa HOM05D004875 ORTHO05D005598 1.3e-59 235.3 391 40.7
C09p50320 Brassica napus HOM05D004875 ORTHO05D005598 1.7e-59 235.0 391 40.9
Haze_24411 Corylus avellana HOM05D004875 ORTHO05D005598 1.7e-59 235.0 421 41.1
Lj1C127G1 Lonicera japonica HOM05D004875 ORTHO05D005598 1.7e-59 235.0 392 41.1
Carub.0008s1904 Capsella rubella HOM05D004875 ORTHO05D005598 2.3e-59 234.6 391 40.9
BcaB08g36179 Brassica carinata HOM05D004875 ORTHO05D005598 3.9e-59 233.8 391 40.4
MBI15_g31180_MAGBIO Magnolia biondii HOM05D004875 ORTHO05D005598 3.9e-59 233.8 394 40.6
Manes.02G211800 Manihot esculenta HOM05D004875 ORTHO05D005598 5.1e-59 233.4 392 42.1
Psat5g154480 Pisum sativum HOM05D004875 ORTHO05D005598 6.6e-59 233.0 391 41.2
COL.COLO4_11154 Corchorus olitorius HOM05D004875 ORTHO05D005598 1.1e-58 232.3 392 40.8
Gohir.D05G109200 Gossypium hirsutum HOM05D004875 ORTHO05D005598 2.5e-58 231.1 392 40.6
Gorai.009G113500 Gossypium raimondii HOM05D004875 ORTHO05D005598 2.5e-58 231.1 392 40.6
Ciclev10030286m.g Citrus clementina HOM05D004875 ORTHO05D005598 3.3e-58 230.7 389 41.6
Dinv09669 Davidia involucrata HOM05D004875 ORTHO05D005598 4.3e-58 230.3 392 41.1
Thecc.09G357800 Theobroma cacao HOM05D004875 ORTHO05D005598 4.3e-58 230.3 392 40.3
Gohir.A05G109100 Gossypium hirsutum HOM05D004875 ORTHO05D005598 5.6e-58 229.9 392 40.3
VMungo0540G0701 Vigna mungo HOM05D004875 ORTHO05D005598 5.6e-58 229.9 392 40.8
Lj6g0003221 Lotus japonicus HOM05D004875 ORTHO05D005598 9.6e-58 229.2 393 42.7
Actinidia32610 Actinidia chinensis HOM05D004875 ORTHO05D005598 1.2e-57 228.8 468 36.1
ECA247G1423 Erigeron canadensis HOM05D004875 ORTHO05D005598 1.2e-57 228.8 391 40.9
CSS0036828 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 1.6e-57 228.4 432 37.3
Cfa011778 Carpinus fangiana HOM05D004875 ORTHO05D005598 2.8e-57 227.6 403 41.9
CiPaw.13G069200 Carya illinoinensis HOM05D004875 ORTHO05D005598 3.6e-57 227.3 392 41.3
TWI31G0826 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 3.6e-57 227.3 392 40.8
SGA_v2.0_scaffold146G36120 Striga asiatica HOM05D004875 ORTHO05D005598 4.7e-57 226.9 390 40.8
Actinidia23196 Actinidia chinensis HOM05D004875 ORTHO05D005598 6.2e-57 226.5 432 38.0
Phvul.006G074100 Phaseolus vulgaris HOM05D004875 ORTHO05D005598 8.1e-57 226.1 391 38.9
vmacro02918 Vaccinium macrocarpon HOM05D004875 ORTHO05D005598 8.1e-57 226.1 388 39.9
Eucgr.B04004 Eucalyptus grandis HOM05D004875 ORTHO05D005598 1.4e-56 225.3 391 40.2
GSVIVG01024634001 Vitis vinifera HOM05D004875 ORTHO05D005598 1.8e-56 224.9 392 40.6
Potri.013G152800 Populus trichocarpa HOM05D004875 ORTHO05D005598 2.4e-56 224.6 391 40.4
Glyma.11G163900 Glycine max HOM05D004875 ORTHO05D005598 3.1e-56 224.2 401 41.4
Lalb_Chr20g0114691 Lupinus albus HOM05D004875 ORTHO05D005598 3.1e-56 224.2 392 40.3
arahy.Tifrunner.gnm1.ann1.LY55DJ Arachis hypogaea HOM05D004875 ORTHO05D005598 4.0e-56 223.8 392 40.1
arahy.Tifrunner.gnm1.ann1.7Z8DLY Arachis hypogaea HOM05D004875 ORTHO05D005598 5.2e-56 223.4 392 40.3
HanXRQChr08g0228771 Helianthus annuus HOM05D004875 ORTHO05D005598 6.9e-56 223.0 391 39.4
CANSAT54G1540 Cannabis sativa HOM05D004875 ORTHO05D005598 9.0e-56 222.6 436 39.2
PSO765G0012 Papaver somniferum HOM05D004875 ORTHO05D005598 1.2e-55 222.2 412 38.1
CSS0009670 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 1.5e-55 221.9 385 39.7
ClCG02G019240 Citrullus lanatus HOM05D004875 ORTHO05D005598 2.0e-55 221.5 459 38.8
Atru.chr3.4118 Acer truncatum HOM05D004875 ORTHO05D005598 2.6e-55 221.1 390 39.2
Cc01_g14850 Coffea canephora HOM05D004875 ORTHO05D000053 2.6e-55 221.1 390 38.7
Hma1.2p1_1692F.1_g297880 Hydrangea macrophylla HOM05D004875 ORTHO05D005598 2.6e-55 221.1 392 39.8
Medtr3g465700 Medicago truncatula HOM05D004875 ORTHO05D005598 2.6e-55 221.1 393 41.0
ATR0594G111 Amborella trichopoda HOM05D004875 ORTHO05D005598 3.4e-55 220.7 391 39.6
TWI79G1304 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 5.8e-55 219.9 403 40.0
Peaxi162Scf00055g01011 Petunia axillaris HOM05D004875 ORTHO05D005598 7.6e-55 219.5 397 39.3
PSO349G0337 Papaver somniferum HOM05D004875 ORTHO05D005598 9.9e-55 219.2 418 36.6
PSO478G4214 Papaver somniferum HOM05D004875 ORTHO05D005598 9.9e-55 219.2 204 58.8
HPP92_003240 Vanilla planifolia HOM05D004875 ORTHO05D005598 1.3e-54 218.8 392 38.3
Glyma.18G057100 Glycine max HOM05D004875 ORTHO05D005598 1.7e-54 218.4 409 40.1
CsaV3_6G015880 Cucumis sativus L. HOM05D004875 ORTHO05D005598 2.2e-54 218.0 388 39.9
Lsat_1_v5_gn_9_14720 Lactuca sativa HOM05D004875 ORTHO05D005598 2.9e-54 217.6 391 39.4
EL10Ac7g15921 Beta vulgaris HOM05D004875 ORTHO05D005598 8.4e-54 216.1 459 34.9
MSTRG.12688 Avicennia marina HOM05D004875 ORTHO05D005598 1.4e-53 215.3 390 39.5
HanXRQChr13g0386431 Helianthus annuus HOM05D004875 ORTHO05D005598 1.9e-53 214.9 458 36.5
Rhsim13G0064100 Rhododendron simsii HOM05D004875 ORTHO05D005598 2.4e-53 214.5 426 37.6
Os05g0345400 Oryza sativa ssp. japonica HOM05D004875 ORTHO05D005598 5.4e-53 213.4 391 38.9
Sed0004894 Sechium edule HOM05D004875 ORTHO05D005598 5.4e-53 213.4 390 39.5
AUR62009668 Chenopodium quinoa HOM05D004875 ORTHO05D005598 9.3e-53 212.6 396 38.1
AUR62001870 Chenopodium quinoa HOM05D004875 ORTHO05D005598 1.2e-52 212.2 396 38.1
SalBow2G1321 Salvia bowleyana HOM05D004875 ORTHO05D005598 1.2e-52 212.2 391 38.6
Ah.08g215110 Amaranthus hybridus HOM05D004875 ORTHO05D005598 3.5e-52 210.7 389 39.1
PGR102G0105 Punica granatum HOM05D004875 ORTHO05D005598 3.5e-52 210.7 410 37.1
Solyc09g057910.3 Solanum lycopersicum HOM05D004875 ORTHO05D005598 3.9e-51 207.2 389 38.0
Sopen09g013270 Solanum pennellii HOM05D004875 ORTHO05D005598 6.6e-51 206.5 389 37.8
Migut.N00759 Erythranthe guttata HOM05D004875 ORTHO05D005598 1.1e-50 205.7 273 47.6
PSO478G0768 Papaver somniferum HOM05D023650 ORTHO05D026023 1.1e-50 205.7 292 42.5
PSO782G3231 Papaver somniferum HOM05D023650 ORTHO05D026023 1.1e-50 205.7 384 36.7
DCAR_018231 Daucus carota HOM05D004875 ORTHO05D005598 1.5e-50 205.3 392 38.0
CDE07G1129 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 2.5e-50 204.5 271 44.6
Sabra13G0122800 Salix brachista HOM05D004875 ORTHO05D005598 8.1e-49 199.5 468 34.8
Duzib168G1610 Durio zibethinus HOM05D004875 ORTHO05D005598 1.3e-46 192.2 385 37.7
Hund05024 Selenicereus undatus HOM05D004875 ORTHO05D005598 1.7e-46 191.8 386 35.2
Nitab4.5_0000002g0030 Nicotiana tabacum HOM05D004875 ORTHO05D005598 9.3e-45 186.0 341 39.3
CDE04G2228 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 1.6e-41 175.3 334 36.5
MELO3C025695.2 Cucumis melo HOM05D004875 ORTHO05D005598 7.6e-39 166.4 226 46.9
Oeu019275.2 Olea europaea HOM05D004875 ORTHO05D005598 2.7e-36 157.9 253 42.3
Nitab4.5_0005130g0040 Nicotiana tabacum HOM05D004875 ORTHO05D005598 3.0e-35 154.5 257 40.9
PSO170G3032 Papaver somniferum HOM05D004875 ORTHO05D005598 6.7e-35 153.3 371 33.4
SEGI_14366 Sequoiadendron giganteum HOM05D004875 ORTHO05D005598 5.6e-34 150.2 232 43.1
AagrBONN_evm.TU.Sc2ySwM_228.3164 Anthoceros agrestis HOM05D004875 ORTHO05D005598 4.8e-33 147.1 292 36.6
Sc12g0001960 Simmondsia chinensis HOM05D004875 ORTHO05D005598 4.8e-33 147.1 228 43.4
Mapoly0170s0019 Marchantia polymorpha HOM05D004875 ORTHO05D005598 1.6e-28 132.1 271 34.7
PSO170G3008 Papaver somniferum HOM05D023650 ORTHO05D026023 3.9e-27 127.5 186 40.3
Pp3c18_5510 Physcomitrium patens HOM05D004875 ORTHO05D005598 1.9e-26 125.2 257 34.2
CAN.G3.44 Capsicum annuum HOM05D004875 ORTHO05D005598 2.9e-22 111.3 111 55.9
CBR_g50477 Chara braunii HOM05D004875 ORTHO05D005598 5.0e-22 110.5 268 29.5
PSO782G0674 Papaver somniferum HOM05D023650 ORTHO05D026023 8.5e-22 109.8 162 40.1
Zm00001eb286340 Zea mays HOM05D004875 ORTHO05D005598 2.3e-19 101.7 259 32.4
C04p28250 Brassica napus HOM05D004875 ORTHO05D005598 3.3e-18 97.8 139 46.0
BolC4t24370H Brassica oleracea HOM05D004875 ORTHO05D005598 3.3e-18 97.8 139 46.0
SHI19217 Sapria himalayana HOM05D004875 ORTHO05D005598 1.6e-12 79.0 161 36.0
C01p15940 Brassica napus HOM05D004875 ORTHO05D005598 3.1e-08 64.7 50 62.0
unitig_0.g436 Utricularia gibba HOM05D004875 ORTHO05D005598 1.5e-07 62.4 135 36.3
BcaC02g10491 Brassica carinata HOM05D004875 ORTHO05D005598 4.5e-07 60.8 116 39.7
MCO11G770 Micromonas commoda HOM05D004875 ORTHO05D005598 2.9e-06 58.2 224 23.7


User provided reference genes

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