Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G6483 Papaver somniferum HOM05D003755 ORTHO05D004385 2.9e-191 671.8 348 100.0
PSO675G2634 Papaver somniferum HOM05D003755 ORTHO05D004385 5.4e-190 667.5 348 99.1
TAR626G0320 Trochodendron aralioides HOM05D003755 ORTHO05D004385 4.3e-147 525.0 348 75.6
Aqoxy4G01977 Aquilegia oxysepala HOM05D003755 ORTHO05D004385 2.7e-141 505.8 336 76.2
TAR624G0284 Trochodendron aralioides HOM05D003755 ORTHO05D004385 1.2e-136 490.3 348 71.8
Nn1g07049 Nelumbo nucifera HOM05D003755 ORTHO05D004385 5.7e-131 471.5 342 70.8
MBI18_g01410_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.2e-125 453.8 343 67.6
TWI38G1592 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 2.3e-124 449.5 338 67.5
TWI38G1222 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 8.8e-124 447.6 339 66.7
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 2.0e-123 446.4 325 71.1
CsaV3_6G049210 Cucumis sativus L. HOM05D003755 ORTHO05D004385 3.4e-123 445.7 342 68.1
CANSAT56G3751 Cannabis sativa HOM05D003755 ORTHO05D004385 7.5e-123 444.5 339 68.4
Eucgr.E04113 Eucalyptus grandis HOM05D003755 ORTHO05D004385 9.8e-123 444.1 321 70.1
PGR004G2273 Punica granatum HOM05D003755 ORTHO05D004385 9.8e-123 444.1 346 65.6
Manes.16G011500 Manihot esculenta HOM05D003755 ORTHO05D004385 1.3e-122 443.7 351 66.4
MELO3C007374.2 Cucumis melo HOM05D003755 ORTHO05D004385 2.2e-122 443.0 342 68.1
CiPaw.09G088000 Carya illinoinensis HOM05D003755 ORTHO05D004385 4.8e-122 441.8 341 67.7
ATR0109G031 Amborella trichopoda HOM05D003755 ORTHO05D004385 6.3e-122 441.4 344 64.0
Cpa.g.sc198.13 Carica papaya HOM05D003755 ORTHO05D004385 4.1e-121 438.7 352 66.2
ClCG01G022150 Citrullus lanatus HOM05D003755 ORTHO05D004385 5.4e-121 438.3 343 67.3
Hma1.2p1_0091F.1_g046190 Hydrangea macrophylla HOM05D003755 ORTHO05D004385 1.6e-120 436.8 342 68.1
Thecc.06G215100 Theobroma cacao HOM05D003755 ORTHO05D004385 2.0e-120 436.4 338 65.4
Duzib160G0429 Durio zibethinus HOM05D003755 ORTHO05D004385 2.7e-120 436.0 339 65.5
Gohir.A06G145950 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.9e-119 432.6 340 65.6
CDE05G0706 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 5.0e-119 431.8 319 67.1
Potri.011G025700 Populus trichocarpa HOM05D003755 ORTHO05D004385 6.5e-119 431.4 356 65.4
QL05p074736 Quercus lobata HOM05D003755 ORTHO05D004385 1.5e-118 430.3 338 66.3
Sabra11G0016200 Salix brachista HOM05D003755 ORTHO05D004385 1.5e-118 430.3 353 65.2
Sabra11G0021900 Salix brachista HOM05D003755 ORTHO05D004385 1.5e-118 430.3 353 65.2
VMungo0720G2911 Vigna mungo HOM05D003755 ORTHO05D004385 2.5e-118 429.5 343 67.3
Ciclev10015811m.g Citrus clementina HOM05D003755 ORTHO05D004385 3.2e-118 429.1 341 64.2
Duzib192G0935 Durio zibethinus HOM05D003755 ORTHO05D004385 3.2e-118 429.1 338 64.2
ECA234G3589 Erigeron canadensis HOM05D003755 ORTHO05D004385 1.6e-117 426.8 343 65.3
Prupe.4G025400 Prunus persica HOM05D003755 ORTHO05D004385 1.6e-117 426.8 346 64.7
Sc05g0008910 Simmondsia chinensis HOM05D003755 ORTHO05D004385 3.6e-117 425.6 337 65.6
Glyma.10G251600 Glycine max HOM05D003755 ORTHO05D004385 1.0e-116 424.1 341 67.4
Phvul.007G053000 Phaseolus vulgaris HOM05D003755 ORTHO05D004385 1.0e-116 424.1 317 70.3
Ca_10975_v3 Cicer arietinum L. HOM05D003755 ORTHO05D004385 1.8e-116 423.3 335 68.1
AUR62012654 Chenopodium quinoa HOM05D003755 ORTHO05D004385 6.8e-116 421.4 338 63.9
Glyma.20G141900 Glycine max HOM05D003755 ORTHO05D004385 8.8e-116 421.0 338 66.9
Cfa000266 Carpinus fangiana HOM05D003755 ORTHO05D004385 2.0e-115 419.9 338 66.9
Atru.chr10.2154 Acer truncatum HOM05D003755 ORTHO05D004385 6.3e-114 414.8 365 60.8
FvH4_3g02600 Fragaria vesca HOM05D003755 ORTHO05D004385 6.3e-114 414.8 344 65.1
Medtr1g105470 Medicago truncatula HOM05D003755 ORTHO05D004385 6.3e-114 414.8 341 65.1
CSS0014334 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 1.8e-113 413.3 315 69.8
Lsat_1_v5_gn_4_58721 Lactuca sativa HOM05D003755 ORTHO05D004385 1.8e-113 413.3 340 65.0
Aa31LG2G9060 Aethionema arabicum HOM05D003755 ORTHO05D004385 1.6e-112 410.2 345 61.4
Psat6g210560 Pisum sativum HOM05D003755 ORTHO05D004385 1.6e-112 410.2 340 63.8
Gohir.D05G171400 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.0e-112 409.8 337 62.0
MD00G1180300 Malus domestica HOM05D003755 ORTHO05D004385 2.7e-112 409.5 345 62.0
FAN21G0915 Fragaria x ananassa HOM05D003755 ORTHO05D004385 5.9e-112 408.3 346 63.3
Lalb_Chr21g0307811 Lupinus albus HOM05D003755 ORTHO05D004385 7.7e-112 407.9 339 65.8
Sp2g02750 Schrenkiella parvula HOM05D003755 ORTHO05D004385 1.7e-111 406.8 339 61.7
AL2G14320 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 2.3e-111 406.4 345 60.9
Carub.0002s0327 Capsella rubella HOM05D003755 ORTHO05D004385 2.3e-111 406.4 345 61.2
Thhalv10023566m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 2.3e-111 406.4 339 61.4
CARHR050550 Cardamine hirsuta HOM05D003755 ORTHO05D004385 3.8e-111 405.6 340 61.2
AT1G61790 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 2.5e-110 402.9 345 60.9
CSS0017235 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 3.3e-110 402.5 314 67.8
CDE11G0393 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 3.3e-110 402.5 333 62.2
Lj5g0019176 Lotus japonicus HOM05D003755 ORTHO05D004385 5.6e-110 401.7 347 62.5
THA.LOC104823520 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 7.3e-110 401.4 341 60.4
COL.COLO4_31737 Corchorus olitorius HOM05D003755 ORTHO05D004385 3.6e-109 399.1 338 61.2
Gohir.A05G168300 Gossypium hirsutum HOM05D003755 ORTHO05D004385 3.6e-109 399.1 337 60.5
THA.LOC104809515 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 4.7e-109 398.7 339 61.1
Migut.H01555 Erythranthe guttata HOM05D003755 ORTHO05D004385 6.1e-109 398.3 319 65.2
Cc02_g11630 Coffea canephora HOM05D003755 ORTHO05D004385 1.0e-108 397.5 338 62.1
Atru.chr10.2153 Acer truncatum HOM05D003755 ORTHO05D004385 1.4e-108 397.1 357 60.8
Ah.09g235250 Amaranthus hybridus HOM05D003755 ORTHO05D004385 2.3e-108 396.4 340 61.5
BcaC06g31863 Brassica carinata HOM05D003755 ORTHO05D004385 2.3e-108 396.4 344 61.3
EL10Ac8g19999 Beta vulgaris HOM05D003755 ORTHO05D004385 4.0e-108 395.6 334 63.5
Sed0012988 Sechium edule HOM05D003755 ORTHO05D004385 7.5e-107 391.3 341 60.7
FAN25G0829 Fragaria x ananassa HOM05D003755 ORTHO05D004385 1.7e-106 390.2 340 63.5
MSTRG.14647 Avicennia marina HOM05D003755 ORTHO05D004385 3.7e-106 389.0 347 60.8
C01p39060 Brassica napus HOM05D003755 ORTHO05D004385 3.7e-106 389.0 339 59.9
BolC1t03856H Brassica oleracea HOM05D003755 ORTHO05D004385 3.7e-106 389.0 339 59.9
Oeu016525.1 Olea europaea HOM05D003755 ORTHO05D004385 4.9e-106 388.7 341 61.3
Sopen03g005650 Solanum pennellii HOM05D003755 ORTHO05D004385 4.9e-106 388.7 349 60.7
Solyc03g031790.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 6.4e-106 388.3 349 60.7
PGSC0003DMG400024071 Solanum tuberosum HOM05D003755 ORTHO05D004385 6.4e-106 388.3 349 59.9
BraA01t03198Z Brassica rapa HOM05D003755 ORTHO05D004385 8.3e-106 387.9 339 59.9
A01p30670 Brassica napus HOM05D003755 ORTHO05D004385 1.1e-105 387.5 339 59.9
A01p30690 Brassica napus HOM05D003755 ORTHO05D004385 1.1e-105 387.5 339 59.9
BcaB04g20374 Brassica carinata HOM05D003755 ORTHO05D004385 2.4e-105 386.3 343 58.9
BcaC02g10535 Brassica carinata HOM05D003755 ORTHO05D004385 3.2e-105 386.0 313 63.3
C04p27760 Brassica napus HOM05D003755 ORTHO05D004385 3.2e-105 386.0 313 63.3
BolC4t24319H Brassica oleracea HOM05D003755 ORTHO05D004385 3.2e-105 386.0 313 63.3
Manes.17G035900 Manihot esculenta HOM05D003755 ORTHO05D004385 3.2e-105 386.0 345 60.6
DCAR_028162 Daucus carota HOM05D003755 ORTHO05D004385 1.2e-104 384.0 340 62.6
MD10G1315200 Malus domestica HOM05D003755 ORTHO05D004385 1.6e-104 383.6 337 62.3
Dinv20022 Davidia involucrata HOM05D003755 ORTHO05D004385 2.7e-104 382.9 308 66.9
SEGI_11297 Sequoiadendron giganteum HOM05D003755 ORTHO05D004385 7.3e-102 374.8 314 61.8
unitig_26.g9395 Utricularia gibba HOM05D003755 ORTHO05D004385 9.5e-102 374.4 336 58.3
Os03g0565100 Oryza sativa ssp. japonica HOM05D003755 ORTHO05D004385 1.4e-100 370.5 342 56.1
Gohir.D09G069500 Gossypium hirsutum HOM05D003755 ORTHO05D004385 4.0e-100 369.0 340 55.6
Gorai.006G083700 Gossypium raimondii HOM05D003755 ORTHO05D004385 4.0e-100 369.0 340 55.6
Gorai.010G177400 Gossypium raimondii HOM05D003755 ORTHO05D004385 2.4e-97 359.8 340 58.5
Rhsim13G0157400 Rhododendron simsii HOM05D003755 ORTHO05D004385 7.0e-97 358.2 269 68.8
Nitab4.5_0000091g0500 Nicotiana tabacum HOM05D003755 ORTHO05D004385 3.5e-96 355.9 328 57.6
Zm00001eb043070 Zea mays HOM05D003755 ORTHO05D004385 3.5e-96 355.9 325 56.6
Lj2A272T65 Lonicera japonica HOM05D003755 ORTHO05D004385 1.9e-94 350.1 352 57.4
AL1G22670 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 3.6e-93 345.9 329 55.0
AT1G11560 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 5.2e-92 342.0 336 53.9
CARHR011840 Cardamine hirsuta HOM05D003755 ORTHO05D004385 6.8e-92 341.7 325 55.1
Thhalv10008090m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 8.9e-92 341.3 338 55.3
Nitab4.5_0005793g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 2.0e-91 340.1 343 53.4
Lalb_Chr06g0164871 Lupinus albus HOM05D003755 ORTHO05D004385 4.4e-91 339.0 340 55.3
SGA_v2.0_scaffold89G27449 Striga asiatica HOM05D003755 ORTHO05D004385 2.9e-90 336.3 335 53.4
Sp1g10170 Schrenkiella parvula HOM05D003755 ORTHO05D004385 4.9e-90 335.5 333 53.5
TPR.G5472 Trifolium pratense HOM05D003755 ORTHO05D004385 6.4e-90 335.1 253 66.8
TWI38G0036 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 6.4e-90 335.1 328 55.8
Sabra04G0011400 Salix brachista HOM05D003755 ORTHO05D004385 3.2e-89 332.8 404 49.0
AagrBONN_evm.TU.Sc2ySwM_362.2118 Anthoceros agrestis HOM05D003755 ORTHO05D004385 1.6e-88 330.5 318 52.5
Mapoly0061s0113 Marchantia polymorpha HOM05D003755 ORTHO05D004385 2.1e-88 330.1 339 49.6
Peaxi162Scf00079g00073 Petunia axillaris HOM05D003755 ORTHO05D004385 3.5e-88 329.3 312 58.0
Pp3c3_13650 Physcomitrium patens HOM05D003755 ORTHO05D004385 2.3e-87 326.6 314 54.1
PGSC0003DMG400002072 Solanum tuberosum HOM05D003755 ORTHO05D004385 5.1e-87 325.5 337 51.6
Lsat_1_v5_gn_1_121441 Lactuca sativa HOM05D003755 ORTHO05D004385 1.1e-86 324.3 350 51.4
Gohir.D06G152000 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.5e-86 323.9 279 61.3
Nitab4.5_0002196g0020 Nicotiana tabacum HOM05D003755 ORTHO05D004385 9.5e-86 321.2 330 53.9
Sopen02g024900 Solanum pennellii HOM05D003755 ORTHO05D004385 2.8e-85 319.7 337 50.7
Carub.0001s1117 Capsella rubella HOM05D003755 ORTHO05D004385 8.1e-85 318.2 316 52.8
Solyc02g080180.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 1.8e-84 317.0 337 50.4
AagrBONN_evm.TU.Sc2ySwM_362.2344 Anthoceros agrestis HOM05D003755 ORTHO05D004385 3.1e-84 316.2 318 50.3
Peaxi162Scf00241g00121 Petunia axillaris HOM05D003755 ORTHO05D004385 3.4e-83 312.8 328 53.7
Pp3c26_7270 Physcomitrium patens HOM05D003755 ORTHO05D004385 1.3e-82 310.8 320 49.7
PGSC0003DMG400010547 Solanum tuberosum HOM05D003755 ORTHO05D004385 1.3e-82 310.8 304 55.6
HanXRQChr01g0003661 Helianthus annuus HOM05D003755 ORTHO05D004385 1.9e-81 307.0 311 51.1
Solyc10g008090.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 2.1e-80 303.5 323 52.0
SGA_v2.0_scaffold114G32031 Striga asiatica HOM05D003755 ORTHO05D004385 3.5e-80 302.8 323 52.6
SalBow8G5594 Salvia bowleyana HOM05D003755 ORTHO05D004385 1.3e-79 300.8 328 48.8
Sopen10g003960 Solanum pennellii HOM05D003755 ORTHO05D004385 3.9e-79 299.3 323 51.7
Pp3c10_1910 Physcomitrium patens HOM05D003755 ORTHO05D004385 5.1e-79 298.9 342 45.0
BraA08t35260Z Brassica rapa HOM05D003755 ORTHO05D004385 6.6e-79 298.5 330 49.4
SMO118G0372 Selaginella moellendorffii HOM05D003755 ORTHO05D004385 1.9e-78 297.0 345 46.4
A08p33440 Brassica napus HOM05D003755 ORTHO05D004385 3.3e-78 296.2 330 49.1
CAN.G569.37 Capsicum annuum HOM05D003755 ORTHO05D004385 9.6e-78 294.7 344 48.8
Haze_06749 Corylus avellana HOM05D003755 ORTHO05D004385 1.6e-77 293.9 257 63.8
C08p14530 Brassica napus HOM05D003755 ORTHO05D004385 2.1e-77 293.5 331 49.5
Lj1A1226T40 Lonicera japonica HOM05D003755 ORTHO05D004385 5.8e-75 285.4 284 55.6
BcaB03g13253 Brassica carinata HOM05D003755 ORTHO05D004385 7.6e-75 285.0 327 49.5
BcaC07g38668 Brassica carinata HOM05D003755 ORTHO05D004385 7.6e-75 285.0 332 48.5
BolC8t49101H Brassica oleracea HOM05D003755 ORTHO05D004385 7.6e-75 285.0 332 48.5
MBI14_g15203_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.6e-72 277.3 222 62.2
Nn1g03617 Nelumbo nucifera HOM05D003755 ORTHO05D004385 1.0e-71 274.6 179 74.9
Nitab4.5_0002196g0010 Nicotiana tabacum HOM05D000234 ORTHO05D004385 1.3e-71 274.2 281 54.4
Gohir.A09G069600 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.7e-71 273.9 269 53.5
AUR62021999 Chenopodium quinoa HOM05D003755 ORTHO05D004385 3.3e-70 269.6 189 69.8
Nitab4.5_0010745g0030 Nicotiana tabacum HOM05D003755 ORTHO05D004385 8.1e-69 265.0 191 66.5
CAN.G404.10 Capsicum annuum HOM05D003755 ORTHO05D004385 4.4e-67 259.2 189 66.1
MBI06_g27714_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 5.8e-67 258.8 189 67.2
CBR_g36660 Chara braunii HOM05D003755 ORTHO05D004385 5.4e-65 252.3 321 45.5
MBI19_g26612_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 4.8e-61 239.2 183 66.1
Nitab4.5_0002347g0110 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.4e-60 237.7 189 61.9
Sed0022949 Sechium edule HOM05D003755 ORTHO05D004385 1.1e-57 228.0 215 58.6
Peaxi162Scf00427g00012 Petunia axillaris HOM05D003755 ORTHO05D004385 1.2e-56 224.6 190 60.5
CBR_g46234 Chara braunii HOM05D003755 ORTHO05D004385 7.4e-54 215.3 334 38.9
Nitab4.5_0002645g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 5.8e-51 205.7 184 57.1
Lsat_1_v5_gn_3_29240 Lactuca sativa HOM05D003755 ORTHO05D004385 4.9e-50 202.6 325 40.6
CAN.G782.22 Capsicum annuum HOM05D003755 ORTHO05D004385 5.5e-49 199.1 233 47.6
Actinidia26947 Actinidia chinensis HOM05D003755 ORTHO05D004385 1.9e-46 190.7 226 51.3
TPR.G16992 Trifolium pratense HOM05D003755 ORTHO05D004385 3.3e-46 189.9 165 61.8
Lsat_1_v5_gn_7_27941 Lactuca sativa HOM05D003755 ORTHO05D004385 2.5e-33 147.1 172 47.1
BraA01t03199Z Brassica rapa HOM05D003755 ORTHO05D004385 3.6e-32 143.3 158 51.9
CAN.G782.11 Capsicum annuum HOM05D003755 ORTHO05D004385 2.6e-30 137.1 162 50.0
Lsat_1_v5_gn_7_47961 Lactuca sativa HOM05D003755 ORTHO05D004385 3.7e-29 133.3 92 67.4
BcaC04g22351 Brassica carinata HOM05D003755 ORTHO05D004385 4.8e-29 132.9 104 66.3
Lsat_1_v5_gn_4_80500 Lactuca sativa HOM05D003755 ORTHO05D004385 5.0e-26 122.9 89 68.5
Cre16.g675602 Chlamydomonas reinhardtii HOM05D003755 ORTHO05D004385 6.5e-26 122.5 311 28.9
CAN.G782.12 Capsicum annuum HOM05D003755 ORTHO05D004385 7.2e-25 119.0 95 58.9
MD02G1269300 Malus domestica HOM05D003755 ORTHO05D004385 4.4e-22 109.8 77 68.8
QL08p007617 Quercus lobata HOM05D003755 ORTHO05D004385 8.5e-18 95.5 81 56.8
QL10p045362 Quercus lobata HOM05D003755 ORTHO05D004385 4.2e-17 93.2 80 57.5
C09p20250 Brassica napus HOM05D003755 ORTHO05D004385 1.6e-16 91.3 75 64.0
MD02G1269200 Malus domestica HOM05D003755 ORTHO05D004385 6.7e-15 85.9 76 56.6
BolC9t54930H Brassica oleracea HOM05D003755 ORTHO05D004385 1.1e-12 78.6 57 64.9
EL10As1g23076 Beta vulgaris HOM05D003755 ORTHO05D004385 5.3e-12 76.3 48 77.1
Lsat_1_v5_gn_7_47981 Lactuca sativa HOM05D003755 ORTHO05D004385 1.2e-11 75.1 67 56.7
BcaB07g31286 Brassica carinata HOM05D003755 ORTHO05D004385 7.7e-11 72.4 74 56.8
QL03p066087 Quercus lobata HOM05D003755 ORTHO05D004385 3.2e-09 67.0 54 63.0
AagrBONN_evm.TU.Sc2ySwM_228.3672 Anthoceros agrestis HOM05D003755 ORTHO05D004385 2.7e-08 63.9 69 44.9


User provided reference genes

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