Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G6474 Papaver somniferum HOM05D005372 ORTHO05D006593 1.8e-81 305.8 150 100.0
PSO675G4385 Papaver somniferum HOM05D005372 ORTHO05D006593 1.6e-74 282.7 150 94.0
Nn3g19715 Nelumbo nucifera HOM05D005372 ORTHO05D006593 1.3e-47 193.4 142 68.3
THA.LOC104810736 Tarenaya hassleriana HOM05D005372 ORTHO05D006593 2.9e-47 192.2 130 73.8
Migut.K01340 Erythranthe guttata HOM05D005372 ORTHO05D006593 8.4e-47 190.7 146 64.4
CiPaw.14G062800 Carya illinoinensis HOM05D005372 ORTHO05D006593 5.4e-46 188.0 130 70.8
MD11G1084700 Malus domestica HOM05D005372 ORTHO05D006593 1.6e-45 186.4 156 66.0
THA.LOC104799412 Tarenaya hassleriana HOM05D005372 ORTHO05D006593 1.6e-45 186.4 149 65.1
TAR636G0867 Trochodendron aralioides HOM05D005372 ORTHO05D006593 4.6e-45 184.9 145 62.8
MD03G1080100 Malus domestica HOM05D005372 ORTHO05D006593 1.7e-44 183.0 155 63.9
TWI79G0177 Tripterygium wilfordii HOM05D005372 ORTHO05D006593 8.7e-44 180.6 158 63.3
BcaB05g22467 Brassica carinata HOM05D005372 ORTHO05D006593 1.5e-43 179.9 152 64.5
TAR633G2482 Trochodendron aralioides HOM05D005372 ORTHO05D006593 1.9e-43 179.5 150 64.0
AL8G35370 Arabidopsis lyrata HOM05D005372 ORTHO05D006593 2.5e-43 179.1 142 66.2
MSTRG.14035 Avicennia marina HOM05D005372 ORTHO05D006593 2.5e-43 179.1 143 60.8
CDE07G0920 Ceratophyllum demersum HOM05D005372 ORTHO05D006593 4.3e-43 178.3 130 64.6
HanXRQChr03g0083951 Helianthus annuus HOM05D005372 ORTHO05D006593 4.3e-43 178.3 120 74.2
BcaC03g14063 Brassica carinata HOM05D005372 ORTHO05D006593 5.6e-43 177.9 152 64.5
C02p12980 Brassica napus HOM05D005372 ORTHO05D006593 5.6e-43 177.9 152 64.5
Gohir.D07G106400 Gossypium hirsutum HOM05D005372 ORTHO05D006593 5.6e-43 177.9 130 66.2
RcHm_v2.0_Chr5g0067341 Rosa chinensis HOM05D005372 ORTHO05D006593 7.3e-43 177.6 139 63.3
Sp6g20690 Schrenkiella parvula HOM05D005372 ORTHO05D006593 1.3e-42 176.8 141 63.8
AT5G58990 Arabidopsis thaliana HOM05D005372 ORTHO05D006593 1.6e-42 176.4 150 63.3
BraA02t05820Z Brassica rapa HOM05D005372 ORTHO05D006593 1.6e-42 176.4 152 65.1
Thhalv10014944m.g Eutrema salsugineum HOM05D005372 ORTHO05D006593 2.1e-42 176.0 142 66.2
FvH4_3g37450 Fragaria vesca HOM05D005372 ORTHO05D006593 2.1e-42 176.0 148 58.8
HanXRQChr04g0109301 Helianthus annuus HOM05D005372 ORTHO05D006593 3.6e-42 175.3 135 68.9
Prupe.6G065000 Prunus persica HOM05D005372 ORTHO05D006593 3.6e-42 175.3 156 61.5
Gorai.001G114500 Gossypium raimondii HOM05D005372 ORTHO05D006593 4.8e-42 174.9 130 65.4
A02p07420 Brassica napus HOM05D005372 ORTHO05D006593 1.1e-41 173.7 152 63.8
Carub.0008s1963 Capsella rubella HOM05D005372 ORTHO05D006593 1.1e-41 173.7 150 61.3
A03p11910 Brassica napus HOM05D005372 ORTHO05D006593 1.4e-41 173.3 150 62.7
Aqoxy4G02649 Aquilegia oxysepala HOM05D005372 ORTHO05D006593 1.8e-41 172.9 145 62.1
AT5G52370 Arabidopsis thaliana HOM05D005372 ORTHO05D006593 2.4e-41 172.6 148 62.2
Aa31LG1G11690 Aethionema arabicum HOM05D005372 ORTHO05D006593 3.1e-41 172.2 140 63.6
CARHR285220 Cardamine hirsuta HOM05D005372 ORTHO05D006593 3.1e-41 172.2 152 62.5
Cc01_g13660 Coffea canephora HOM05D005372 ORTHO05D006593 4.0e-41 171.8 133 64.7
FAN25G0461 Fragaria x ananassa HOM05D005372 ORTHO05D006593 4.0e-41 171.8 138 60.9
TWI75G1302 Tripterygium wilfordii HOM05D005372 ORTHO05D006593 9.0e-41 170.6 145 64.1
Sopen06g033010 Solanum pennellii HOM05D005372 ORTHO05D006593 1.5e-40 169.9 147 61.2
PGSC0003DMG400030429 Solanum tuberosum HOM05D005372 ORTHO05D006593 2.0e-40 169.5 139 62.6
BcaB08g36298 Brassica carinata HOM05D005372 ORTHO05D006593 2.6e-40 169.1 141 62.4
Solyc06g076620.3 Solanum lycopersicum HOM05D005372 ORTHO05D006593 2.6e-40 169.1 147 61.9
BraA03t10503Z Brassica rapa HOM05D005372 ORTHO05D006593 5.8e-40 167.9 150 59.3
Nitab4.5_0002718g0040 Nicotiana tabacum HOM05D005372 ORTHO05D006593 5.8e-40 167.9 147 59.2
BolC3t13848H Brassica oleracea HOM05D005372 ORTHO05D006593 2.2e-39 166.0 148 62.2
Dinv17075 Davidia involucrata HOM05D005372 ORTHO05D006593 2.2e-39 166.0 144 59.7
Dinv43019 Davidia involucrata HOM05D005372 ORTHO05D006593 2.2e-39 166.0 144 59.7
Dinv43078 Davidia involucrata HOM05D005372 ORTHO05D006593 2.2e-39 166.0 144 59.7
Hma1.2p1_0543F.1_g175310 Hydrangea macrophylla HOM05D005372 ORTHO05D006593 2.2e-39 166.0 150 58.7
Aqoxy1G00762 Aquilegia oxysepala HOM05D005372 ORTHO05D006593 3.8e-39 165.2 136 61.0
ECA247G0538 Erigeron canadensis HOM05D005372 ORTHO05D006593 3.8e-39 165.2 82 90.2
unitig_26.g9774 Utricularia gibba HOM05D005372 ORTHO05D006593 3.8e-39 165.2 115 69.6
Duzib168G1893 Durio zibethinus HOM05D005372 ORTHO05D006593 4.9e-39 164.9 130 62.3
Gohir.A07G102200 Gossypium hirsutum HOM05D005372 ORTHO05D006593 4.9e-39 164.9 130 61.5
Nitab4.5_0000744g0090 Nicotiana tabacum HOM05D005372 ORTHO05D006593 4.9e-39 164.9 150 59.3
SalBow4G1938 Salvia bowleyana HOM05D005372 ORTHO05D006593 4.9e-39 164.9 133 62.4
Rhsim13G0075100 Rhododendron simsii HOM05D005372 ORTHO05D006593 8.4e-39 164.1 150 60.7
C03p14010 Brassica napus HOM05D005372 ORTHO05D006593 1.1e-38 163.7 123 67.5
Cpa.g.sc112.93 Carica papaya HOM05D005372 ORTHO05D006593 3.2e-38 162.2 159 56.6
Lsat_1_v5_gn_9_25321 Lactuca sativa HOM05D005372 ORTHO05D006593 5.4e-38 161.4 93 80.6
BcaB01g04621 Brassica carinata HOM05D005372 ORTHO05D006593 7.1e-38 161.0 151 60.3
Sabra09G0028200 Salix brachista HOM05D005372 ORTHO05D006593 3.5e-37 158.7 155 54.2
SGA_v2.0_scaffold35G14025 Striga asiatica HOM05D005372 ORTHO05D006593 4.6e-37 158.3 147 57.1
FAN11G0559 Fragaria x ananassa HOM05D005372 ORTHO05D006593 1.0e-36 157.1 148 54.1
Thecc.09G309200 Theobroma cacao HOM05D005372 ORTHO05D006593 1.0e-36 157.1 136 56.6
Potri.009G040100 Populus trichocarpa HOM05D005372 ORTHO05D006593 1.8e-36 156.4 109 69.7
MBI14_g28605_MAGBIO Magnolia biondii HOM05D005372 ORTHO05D006593 2.3e-36 156.0 77 88.3
SGA_v2.0_scaffold8G04342 Striga asiatica HOM05D005372 ORTHO05D006593 3.9e-36 155.2 162 54.3
Cfa011626 Carpinus fangiana HOM05D005372 ORTHO05D006593 5.1e-36 154.8 137 56.2
Atru.chr3.4040 Acer truncatum HOM05D005372 ORTHO05D006593 6.7e-36 154.5 101 72.3
Eucgr.J01954 Eucalyptus grandis HOM05D005372 ORTHO05D006593 6.7e-36 154.5 140 56.4
FAN16G3555 Fragaria x ananassa HOM05D005372 ORTHO05D006593 6.7e-36 154.5 162 51.2
ClCG02G019810 Citrullus lanatus HOM05D005372 ORTHO05D006593 8.7e-36 154.1 149 53.7
Phvul.011G039001 Phaseolus vulgaris HOM05D005372 ORTHO05D006593 8.7e-36 154.1 124 60.5
CANSAT54G2064 Cannabis sativa HOM05D005372 ORTHO05D006593 1.1e-35 153.7 132 62.1
Oeu017419.1 Olea europaea HOM05D005372 ORTHO05D006593 1.1e-35 153.7 81 82.7
PGR119G2477 Punica granatum HOM05D005372 ORTHO05D006593 2.5e-35 152.5 94 75.5
CAN.G394.95 Capsicum annuum HOM05D005372 ORTHO05D006593 3.3e-35 152.1 139 56.1
Ciclev10029469m.g Citrus clementina HOM05D005372 ORTHO05D006593 3.3e-35 152.1 95 71.6
FAN21G1258 Fragaria x ananassa HOM05D005372 ORTHO05D006593 4.3e-35 151.8 138 54.3
Peaxi162Scf01058g00152 Petunia axillaris HOM05D005372 ORTHO05D006593 4.3e-35 151.8 138 56.5
Actinidia08556 Actinidia chinensis HOM05D005372 ORTHO05D006593 5.6e-35 151.4 146 56.2
CSS0039141 Camellia sinensis var. sinensis HOM05D005372 ORTHO05D006593 9.6e-35 150.6 155 52.3
Actinidia25121 Actinidia chinensis HOM05D005372 ORTHO05D006593 2.1e-34 149.4 95 75.8
CSS0037054 Camellia sinensis var. sinensis HOM05D005372 ORTHO05D006593 3.7e-34 148.7 147 52.4
Lalb_Chr14g0372091 Lupinus albus HOM05D005372 ORTHO05D006593 4.8e-34 148.3 76 84.2
SalBow6G3269 Salvia bowleyana HOM05D005372 ORTHO05D006593 6.2e-34 147.9 137 56.2
CsaV3_6G016530 Cucumis sativus L. HOM05D005372 ORTHO05D006593 8.1e-34 147.5 149 53.0
Glyma.13G341200 Glycine max HOM05D005372 ORTHO05D006593 8.1e-34 147.5 93 71.0
Potri.001G246800 Populus trichocarpa HOM05D005372 ORTHO05D006593 8.1e-34 147.5 145 55.2
VMungo1127G1276 Vigna mungo HOM05D005372 ORTHO05D006593 1.1e-33 147.1 94 69.1
Sed0010324 Sechium edule HOM05D005372 ORTHO05D006593 1.4e-33 146.7 159 50.9
Lalb_Chr24g0397111 Lupinus albus HOM05D005372 ORTHO05D006593 1.8e-33 146.4 76 82.9
Glyma.15G033200 Glycine max HOM05D005372 ORTHO05D006593 4.0e-33 145.2 76 84.2
AUR62001715 Chenopodium quinoa HOM05D005372 ORTHO05D006593 5.3e-33 144.8 146 56.2
Hund04902 Selenicereus undatus HOM05D005372 ORTHO05D006593 6.9e-33 144.4 139 56.1
Ah.13g070300 Amaranthus hybridus HOM05D005372 ORTHO05D006593 1.2e-32 143.7 81 79.0
Glyma.11G111000 Glycine max HOM05D005372 ORTHO05D006593 1.5e-32 143.3 91 71.4
TPR.G6862 Trifolium pratense HOM05D005372 ORTHO05D006593 1.5e-32 143.3 75 81.3
Phvul.011G206600 Phaseolus vulgaris HOM05D005372 ORTHO05D006593 2.6e-32 142.5 129 54.3
Lj3g0018318 Lotus japonicus HOM05D005372 ORTHO05D006593 4.5e-32 141.7 76 82.9
arahy.Tifrunner.gnm1.ann1.IGF4QT Arachis hypogaea HOM05D005372 ORTHO05D006593 5.8e-32 141.4 77 81.8
arahy.Tifrunner.gnm1.ann1.UR5XNC Arachis hypogaea HOM05D005372 ORTHO05D006593 5.8e-32 141.4 77 81.8
MELO3C025881.2 Cucumis melo HOM05D005372 ORTHO05D006593 5.8e-32 141.4 149 51.0
Manes.02G123700 Manihot esculenta HOM05D005372 ORTHO05D006593 5.8e-32 141.4 94 70.2
Medtr2g097890 Medicago truncatula HOM05D005372 ORTHO05D006593 5.8e-32 141.4 125 54.4
Psat5g285800 Pisum sativum HOM05D005372 ORTHO05D006593 9.9e-32 140.6 76 78.9
VMungo1127G1643 Vigna mungo HOM05D005372 ORTHO05D006593 1.3e-31 140.2 75 81.3
Zm00001eb066290 Zea mays HOM05D005372 ORTHO05D006593 1.7e-31 139.8 113 60.2
Sabra16G0149900 Salix brachista HOM05D005372 ORTHO05D006593 2.2e-31 139.4 141 53.2
BolC2t07410H Brassica oleracea HOM05D005372 ORTHO05D006593 4.9e-31 138.3 163 54.0
Lj6g0015977 Lotus japonicus HOM05D005372 ORTHO05D006593 8.4e-31 137.5 83 74.7
EL10Ac7g16097 Beta vulgaris HOM05D005372 ORTHO05D006593 4.2e-30 135.2 91 70.3
Os02g0481000 Oryza sativa ssp. japonica HOM05D005372 ORTHO05D006593 7.1e-30 134.4 88 69.3
Zm00001eb433670 Zea mays HOM05D005372 ORTHO05D006593 7.1e-30 134.4 148 48.6
C09p51220 Brassica napus HOM05D005372 ORTHO05D006593 3.5e-29 132.1 149 54.4
Dinv34320 Davidia involucrata HOM05D001226 ORTHO05D006593 6.0e-29 131.3 133 56.4
Nn1g02876 Nelumbo nucifera HOM05D005372 ORTHO05D006593 7.9e-29 131.0 101 64.4
ATR0618G182 Amborella trichopoda HOM05D005372 ORTHO05D006593 7.4e-27 124.4 95 64.2
Haze_24230 Corylus avellana HOM05D005372 ORTHO05D006593 1.4e-25 120.2 110 56.4
QL01p028939 Quercus lobata HOM05D005372 ORTHO05D006593 4.0e-25 118.6 106 57.5
Lj4P191T41 Lonicera japonica HOM05D005372 ORTHO05D006593 6.9e-25 117.9 97 60.8
DCAR_028257 Daucus carota HOM05D005372 ORTHO05D006593 7.6e-24 114.4 54 88.9
Nitab4.5_0000933g0130 Nicotiana tabacum HOM05D005372 ORTHO05D006593 4.9e-23 111.7 143 44.8
Oeu002454.1 Olea europaea HOM05D005372 ORTHO05D006593 2.3e-20 102.8 77 67.5
SHI05895 Sapria himalayana HOM05D005372 ORTHO05D006593 5.7e-19 98.2 107 45.8
Mapoly0002s0283 Marchantia polymorpha HOM05D005372 ORTHO05D006593 2.2e-18 96.3 77 54.5
AagrBONN_evm.TU.Sc2ySwM_228.2511 Anthoceros agrestis HOM05D005372 ORTHO05D006593 4.8e-18 95.1 129 41.1
Pp3c9_8860 Physcomitrium patens HOM05D005372 ORTHO05D006593 4.1e-17 92.0 119 42.0
Sc06g0008390 Simmondsia chinensis HOM05D005372 ORTHO05D006593 5.9e-16 88.2 69 60.9
COL.COLO4_19070 Corchorus olitorius HOM05D005372 ORTHO05D006593 1.0e-15 87.4 139 41.0
BraA10t43707Z Brassica rapa HOM05D005372 ORTHO05D006593 3.8e-15 85.5 81 56.8
CBR_g8222 Chara braunii HOM05D005372 ORTHO05D006593 1.1e-14 84.0 94 43.6
Glyma.12G037300 Glycine max HOM05D005372 ORTHO05D006593 6.1e-13 78.2 43 76.7
vmacro03009 Vaccinium macrocarpon HOM05D005372 ORTHO05D006593 1.4e-12 77.0 63 61.9
MD06G1146500 Malus domestica HOM05D005372 ORTHO05D006593 6.7e-12 74.7 87 52.9
SMO111G0201 Selaginella moellendorffii HOM05D005372 ORTHO05D006593 8.2e-10 67.8 91 38.5
Zm00001eb217580 Zea mays HOM05D000360 ORTHO05D000234 3.1e-09 65.9 41 68.3
Zm00001eb023370 Zea mays HOM05D000798 ORTHO05D000659 6.9e-09 64.7 58 51.7
Dinv20930 Davidia involucrata HOM05D005372 ORTHO05D006593 9.1e-09 64.3 42 64.3
Dinv21014 Davidia involucrata HOM05D005372 ORTHO05D006593 2.0e-08 63.2 41 65.9


User provided reference genes

Program Settings