Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 6.5e-306 1053.1 494 100.0
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 3.3e-273 944.5 463 95.2
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 4.9e-237 824.3 453 82.3
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 4.9e-237 824.3 440 85.0
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 1.0e-234 816.6 440 84.1
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 1.0e-234 816.6 447 81.4
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 1.8e-234 815.8 440 83.9
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 8.7e-234 813.5 455 81.1
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 1.1e-233 813.1 433 84.8
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 1.5e-233 812.8 449 81.1
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 3.3e-233 811.6 435 84.8
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 2.8e-232 808.5 441 83.9
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 4.8e-232 807.7 434 83.2
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 1.1e-231 806.6 442 82.1
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 1.4e-231 806.2 433 84.1
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 2.4e-231 805.4 458 78.2
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 2.4e-231 805.4 437 83.1
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 4.0e-231 804.7 453 81.0
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 5.3e-231 804.3 429 83.0
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 5.3e-231 804.3 447 81.2
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 6.9e-231 803.9 442 82.1
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 6.9e-231 803.9 433 84.1
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 9.0e-231 803.5 446 80.9
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 1.5e-230 802.7 434 82.3
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 2.0e-230 802.4 453 79.5
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 2.6e-230 802.0 440 82.7
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 4.5e-230 801.2 446 80.9
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 5.8e-230 800.8 446 80.7
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 1.7e-229 799.3 449 80.8
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 2.9e-229 798.5 432 83.1
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 3.8e-229 798.1 444 80.9
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 8.4e-229 797.0 437 82.4
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 1.4e-228 796.2 446 81.4
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 1.9e-228 795.8 441 82.5
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 1.9e-228 795.8 448 80.6
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 4.2e-228 794.7 434 81.3
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 4.2e-228 794.7 428 82.5
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 4.2e-228 794.7 448 81.5
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 5.5e-228 794.3 433 82.2
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 7.1e-228 793.9 453 78.6
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 1.6e-227 792.7 435 81.8
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 2.7e-227 792.0 436 82.1
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 4.6e-227 791.2 439 80.9
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 4.6e-227 791.2 445 80.4
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 6.0e-227 790.8 466 78.5
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 7.9e-227 790.4 432 83.1
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 1.0e-226 790.0 448 80.1
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 1.3e-226 789.6 446 80.5
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 1.3e-226 789.6 446 80.5
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 1.8e-226 789.3 429 82.8
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 3.9e-226 788.1 446 80.7
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 8.7e-226 786.9 446 79.4
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 1.1e-225 786.6 446 80.5
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 1.1e-225 786.6 435 82.3
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.1e-225 786.6 450 78.4
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 1.5e-225 786.2 471 77.5
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 1.5e-225 786.2 442 80.8
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 3.3e-225 785.0 437 82.2
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 4.3e-225 784.6 448 79.7
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 7.4e-225 783.9 450 78.0
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 9.6e-225 783.5 448 79.5
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 9.6e-225 783.5 438 80.6
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 1.6e-224 782.7 440 80.9
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 2.1e-224 782.3 444 79.5
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 6.2e-224 780.8 448 79.5
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 1.4e-223 779.6 453 78.8
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 2.0e-222 775.8 439 78.6
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 2.6e-222 775.4 437 78.7
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 2.6e-222 775.4 437 79.4
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 4.5e-222 774.6 434 79.7
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 4.5e-222 774.6 434 79.7
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 1.0e-221 773.5 481 73.6
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 1.0e-221 773.5 481 73.6
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 1.3e-221 773.1 442 80.1
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 6.5e-221 770.8 432 79.6
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 1.4e-220 769.6 441 77.3
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 7.1e-220 767.3 479 73.5
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 1.2e-219 766.5 436 77.3
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 3.5e-219 765.0 439 76.5
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 4.6e-219 764.6 437 77.8
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 4.6e-219 764.6 439 77.7
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 2.3e-218 762.3 438 79.0
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 2.5e-217 758.8 442 78.5
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 2.8e-216 755.4 449 76.2
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 3.7e-216 755.0 433 79.0
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 1.5e-214 749.6 459 76.5
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 4.2e-212 741.5 446 75.3
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 3.6e-211 738.4 439 74.7
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 1.8e-210 736.1 434 77.4
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 1.6e-208 729.6 480 71.0
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 5.0e-205 718.0 377 86.2
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 7.2e-204 714.1 376 85.6
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 1.2e-203 713.4 446 73.8
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 5.2e-194 681.4 402 78.1
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 3.3e-193 678.7 438 71.2
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 6.5e-189 664.5 422 70.9
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 6.5e-189 664.5 435 70.1
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 1.6e-187 659.8 448 69.9
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 1.5e-180 636.7 447 66.7
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 1.1e-175 620.5 407 72.2
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 4.1e-175 618.6 434 66.1
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 2.8e-163 579.3 334 78.1
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 1.4e-162 577.0 441 62.1
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 4.6e-158 562.0 302 82.5
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 1.3e-157 560.5 459 59.3
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 2.1e-155 553.1 307 79.8
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 2.1e-155 553.1 381 68.5
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 6.2e-147 525.0 280 83.9
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 1.4e-130 470.7 271 77.5
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.7e-80 304.3 196 74.5
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 7.7e-73 278.9 166 74.1
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 8.5e-72 275.4 178 73.6
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 4.0e-69 266.5 132 89.4
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 4.8e-67 259.6 379 43.5
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 2.0e-65 254.2 133 82.7
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 2.5e-63 247.3 301 47.8
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 8.0e-62 242.3 131 85.5
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 1.5e-60 238.0 132 81.8
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 5.7e-60 236.1 230 50.4
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 7.7e-57 225.7 120 84.2
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 6.6e-48 196.1 124 71.0
TWI38G1497 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 3.3e-47 193.7 119 73.9
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 3.1e-45 187.2 250 47.2
SEGI_25954 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 3.5e-33 147.1 88 71.6
SEGI_23248 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 2.3e-24 117.9 72 68.1
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 3.6e-22 110.5 181 37.6
arahy.Tifrunner.gnm1.ann1.EZ2Q4B Arachis hypogaea HOM05D006004 ORTHO05D006976 1.8e-21 108.2 61 77.0
FAN25G2983 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.4e-21 107.8 103 49.5
TWI38G0821 Tripterygium wilfordii HOM05D006017 ORTHO05D413584 3.1e-21 107.5 55 83.6
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.2e-20 105.5 105 52.4
BraA10t43231Z Brassica rapa HOM05D006017 ORTHO05D017343 6.6e-16 89.7 68 60.3
HPP92_003866 Vanilla planifolia HOM05D006017 ORTHO05D007821 7.1e-10 69.7 56 60.7
Mapoly0432s0001 Marchantia polymorpha HOM05D019566 ORTHO05D017343 1.0e-08 65.9 43 67.4


User provided reference genes

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