Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G6356 Papaver somniferum HOM05D004231 ORTHO05D004814 1.5e-198 696.0 372 100.0
PSO675G1855 Papaver somniferum HOM05D004231 ORTHO05D004814 2.1e-195 685.6 372 98.1
PSO063G5124 Papaver somniferum HOM05D004231 ORTHO05D004814 6.5e-165 584.3 369 85.6
PSO782G1111 Papaver somniferum HOM05D004231 ORTHO05D004814 3.2e-164 582.0 369 85.4
Dinv14175 Davidia involucrata HOM05D004231 ORTHO05D004814 8.5e-141 504.2 371 73.6
ECA233G1094 Erigeron canadensis HOM05D004231 ORTHO05D004814 1.4e-138 496.9 360 75.6
Nn7g36283 Nelumbo nucifera HOM05D004231 ORTHO05D004814 4.4e-137 491.9 368 71.2
Lsat_1_v5_gn_8_121420 Lactuca sativa HOM05D004231 ORTHO05D004814 1.3e-136 490.3 369 73.2
Actinidia17992 Actinidia chinensis HOM05D004231 ORTHO05D004814 2.2e-136 489.6 337 76.3
Hma1.2p1_0652F.1_g195880 Hydrangea macrophylla HOM05D004231 ORTHO05D004814 8.2e-136 487.6 356 74.4
CSS0007201 Camellia sinensis var. sinensis HOM05D004231 ORTHO05D004814 3.1e-135 485.7 343 74.9
Aqoxy1G01703 Aquilegia oxysepala HOM05D004231 ORTHO05D004814 7.7e-134 481.1 369 70.2
ECA236G1252 Erigeron canadensis HOM05D000103 ORTHO05D000049 7.7e-134 481.1 322 80.1
Oeu005953.1 Olea europaea HOM05D004231 ORTHO05D004814 1.3e-133 480.3 336 76.5
Nn2g15251 Nelumbo nucifera HOM05D004231 ORTHO05D004814 1.7e-133 479.9 366 71.9
HanXRQChr16g0515121 Helianthus annuus HOM05D004231 ORTHO05D004814 3.8e-133 478.8 348 75.6
Migut.N00847 Erythranthe guttata HOM05D004231 ORTHO05D004814 1.2e-131 473.8 328 77.7
CDE05G2018 Ceratophyllum demersum HOM05D004231 ORTHO05D004814 1.6e-131 473.4 339 74.9
Nitab4.5_0000783g0100 Nicotiana tabacum HOM05D004231 ORTHO05D004814 2.7e-131 472.6 332 75.9
CDE05G1267 Ceratophyllum demersum HOM05D004231 ORTHO05D004814 3.6e-131 472.2 348 73.9
Solyc04g008760.3 Solanum lycopersicum HOM05D004231 ORTHO05D004814 1.0e-130 470.7 329 77.2
QL05p043527 Quercus lobata HOM05D004231 ORTHO05D004814 1.8e-130 469.9 373 70.2
Sopen04g003940 Solanum pennellii HOM05D004231 ORTHO05D004814 1.8e-130 469.9 325 77.8
SalBow7G0905 Salvia bowleyana HOM05D004231 ORTHO05D004814 3.0e-130 469.2 331 74.6
PGSC0003DMG400025309 Solanum tuberosum HOM05D004231 ORTHO05D004814 4.0e-130 468.8 325 77.5
SGA_v2.0_scaffold36G14389 Striga asiatica HOM05D004231 ORTHO05D004814 4.0e-130 468.8 329 75.1
MSTRG.25000 Avicennia marina HOM05D004231 ORTHO05D004814 8.8e-130 467.6 362 70.2
ClCG02G003360 Citrullus lanatus HOM05D004231 ORTHO05D004814 1.2e-129 467.2 344 75.0
CsaV3_7G001970 Cucumis sativus L. HOM05D004231 ORTHO05D004814 1.5e-129 466.8 344 74.4
CANSAT25G0301 Cannabis sativa HOM05D004231 ORTHO05D004814 2.0e-129 466.5 369 71.0
MELO3C015708.2 Cucumis melo HOM05D004231 ORTHO05D004814 2.6e-129 466.1 344 74.7
Manes.01G017200 Manihot esculenta HOM05D004231 ORTHO05D004814 3.3e-129 465.7 365 70.1
CSS0030147 Camellia sinensis var. sinensis HOM05D004231 ORTHO05D004814 4.4e-129 465.3 361 68.7
FvH4_2g16830 Fragaria vesca HOM05D004231 ORTHO05D004814 9.7e-129 464.2 354 71.5
FAN15G0610 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.3e-128 463.8 332 74.7
RhsimUnG0022900 Rhododendron simsii HOM05D004231 ORTHO05D004814 1.7e-128 463.4 347 72.0
SGA_v2.0_scaffold172G39001 Striga asiatica HOM05D004231 ORTHO05D004814 2.2e-128 463.0 333 73.9
MD10G1142000 Malus domestica HOM05D004231 ORTHO05D004814 2.8e-128 462.6 345 72.5
CAN.G5871.1 Capsicum annuum HOM05D004231 ORTHO05D004814 4.8e-128 461.8 370 69.7
RcHm_v2.0_Chr6g0280961 Rosa chinensis HOM05D004231 ORTHO05D004814 4.8e-128 461.8 354 71.8
Potri.004G207000 Populus trichocarpa HOM05D004231 ORTHO05D004814 8.2e-128 461.1 367 70.0
Potri.009G168400 Populus trichocarpa HOM05D004231 ORTHO05D004814 1.1e-127 460.7 344 73.8
Prupe.8G180500 Prunus persica HOM05D004231 ORTHO05D004814 1.4e-127 460.3 368 68.5
Lsat_1_v5_gn_4_71321 Lactuca sativa HOM05D004231 ORTHO05D004814 1.8e-127 459.9 346 65.9
Sabra04G0139300 Salix brachista HOM05D004231 ORTHO05D004814 1.8e-127 459.9 365 70.4
Cc11_g00240 Coffea canephora HOM05D004231 ORTHO05D004814 5.3e-127 458.4 370 69.5
Peaxi162Scf00362g00110 Petunia axillaris HOM05D004231 ORTHO05D004814 5.3e-127 458.4 331 72.8
FAN24G0296 Fragaria x ananassa HOM05D004231 ORTHO05D004814 9.1e-127 457.6 347 71.8
Nitab4.5_0008730g0040 Nicotiana tabacum HOM05D004231 ORTHO05D004814 2.0e-126 456.4 353 71.4
Sopen01g054320 Solanum pennellii HOM05D004231 ORTHO05D004814 2.0e-126 456.4 328 73.5
TWI75G1214 Tripterygium wilfordii HOM05D004231 ORTHO05D004814 2.7e-126 456.1 371 67.7
Cfa005374 Carpinus fangiana HOM05D004231 ORTHO05D004814 5.9e-126 454.9 362 68.8
CiPaw.06G115200 Carya illinoinensis HOM05D004231 ORTHO05D004814 7.7e-126 454.5 367 69.8
Nitab4.5_0000129g0030 Nicotiana tabacum HOM05D004231 ORTHO05D004814 7.7e-126 454.5 321 76.6
arahy.Tifrunner.gnm1.ann1.9M6UE0 Arachis hypogaea HOM05D004231 ORTHO05D004814 1.3e-125 453.8 348 71.0
TPR.G18636 Trifolium pratense HOM05D004231 ORTHO05D004814 1.7e-125 453.4 371 68.2
Ca_10777_v3 Cicer arietinum L. HOM05D004231 ORTHO05D004814 3.8e-125 452.2 341 72.7
Duzib052G0175 Durio zibethinus HOM05D004231 ORTHO05D004814 3.8e-125 452.2 367 67.3
PGSC0003DMG400014663 Solanum tuberosum HOM05D000109 ORTHO05D004814 5.0e-125 451.8 328 72.6
PGR042G2635 Punica granatum HOM05D004231 ORTHO05D004814 6.5e-125 451.4 368 67.7
Sed0021373 Sechium edule HOM05D004231 ORTHO05D004814 6.5e-125 451.4 331 74.9
Ciclev10028700m.g Citrus clementina HOM05D004231 ORTHO05D004814 1.1e-124 450.7 368 69.0
A06p34120 Brassica napus HOM05D004231 ORTHO05D004814 1.5e-124 450.3 378 67.7
FAN27G2171 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.5e-124 450.3 347 71.2
arahy.Tifrunner.gnm1.ann1.3XUX0K Arachis hypogaea HOM05D004231 ORTHO05D004814 1.9e-124 449.9 349 70.2
A07p03760 Brassica napus HOM05D004231 ORTHO05D004814 2.5e-124 449.5 345 71.6
BraA07t28164Z Brassica rapa HOM05D004231 ORTHO05D004814 2.5e-124 449.5 345 71.6
Lalb_Chr12g0208621 Lupinus albus HOM05D004231 ORTHO05D004814 2.5e-124 449.5 336 70.8
BcaC01g02941 Brassica carinata HOM05D004231 ORTHO05D004814 3.2e-124 449.1 374 67.9
EL10Ac9g21537 Beta vulgaris HOM05D004231 ORTHO05D004814 4.2e-124 448.7 368 68.2
Sc08g0002160 Simmondsia chinensis HOM05D004231 ORTHO05D004814 4.2e-124 448.7 335 72.2
BcaB07g31737 Brassica carinata HOM05D004231 ORTHO05D004814 5.5e-124 448.4 345 71.0
Sed0027682 Sechium edule HOM05D004231 ORTHO05D004814 5.5e-124 448.4 346 72.3
BraA06t26345Z Brassica rapa HOM05D004231 ORTHO05D004814 7.2e-124 448.0 374 67.9
Lalb_Chr07g0189301 Lupinus albus HOM05D004231 ORTHO05D004814 7.2e-124 448.0 368 66.6
Thecc.02G146400 Theobroma cacao HOM05D004231 ORTHO05D004814 7.2e-124 448.0 367 66.5
C07p06030 Brassica napus HOM05D004231 ORTHO05D004814 9.4e-124 447.6 345 71.0
AL3G50130 Arabidopsis lyrata HOM05D004231 ORTHO05D004814 1.2e-123 447.2 345 71.9
BcaB03g16478 Brassica carinata HOM05D004231 ORTHO05D004814 1.2e-123 447.2 351 70.1
C09p13290 Brassica napus HOM05D004231 ORTHO05D004814 1.2e-123 447.2 351 69.8
BolC7t41016H Brassica oleracea HOM05D004231 ORTHO05D004814 1.2e-123 447.2 351 70.1
Carub.0003s3121 Capsella rubella HOM05D004231 ORTHO05D004814 2.1e-123 446.4 357 69.5
Sp3g30610 Schrenkiella parvula HOM05D004231 ORTHO05D004814 2.1e-123 446.4 345 71.3
Ah.01g009950 Amaranthus hybridus HOM05D004231 ORTHO05D004814 2.7e-123 446.0 372 67.2
BolC9t54222H Brassica oleracea HOM05D004231 ORTHO05D004814 2.7e-123 446.0 351 69.5
BraA09t36767Z Brassica rapa HOM05D004231 ORTHO05D004814 2.7e-123 446.0 351 69.5
Thhalv10022738m.g Eutrema salsugineum HOM05D004231 ORTHO05D004814 2.7e-123 446.0 345 71.6
C03p58080 Brassica napus HOM05D004231 ORTHO05D004814 3.6e-123 445.7 376 67.8
BolC3t18081H Brassica oleracea HOM05D004231 ORTHO05D004814 3.6e-123 445.7 376 67.8
CARHR293610 Cardamine hirsuta HOM05D004231 ORTHO05D004814 3.6e-123 445.7 345 71.6
Peaxi162Scf00329g00312 Petunia axillaris HOM05D004231 ORTHO05D004814 3.6e-123 445.7 353 70.3
unitig_0.g2083 Utricularia gibba HOM05D004231 ORTHO05D004814 4.7e-123 445.3 332 72.3
BcaB03g16474 Brassica carinata HOM05D004231 ORTHO05D004814 6.1e-123 444.9 345 71.3
A09p11260 Brassica napus HOM05D004231 ORTHO05D004814 6.1e-123 444.9 351 69.2
AT2G17265 Arabidopsis thaliana HOM05D004231 ORTHO05D004814 8.0e-123 444.5 345 71.3
LjContig00081g0001175 Lotus japonicus HOM05D004231 ORTHO05D004814 8.0e-123 444.5 367 68.9
BcaC04g22982 Brassica carinata HOM05D004231 ORTHO05D004814 2.3e-122 443.0 351 69.5
Aa31LG2G14870 Aethionema arabicum HOM05D004231 ORTHO05D004814 1.5e-121 440.3 363 67.5
TPR.G5084 Trifolium pratense HOM05D004231 ORTHO05D004814 2.0e-121 439.9 341 71.0
CiPaw.05G093400 Carya illinoinensis HOM05D004231 ORTHO05D004814 2.6e-121 439.5 356 68.5
DCAR_006270 Daucus carota HOM05D004231 ORTHO05D004814 2.8e-120 436.0 330 69.7
Medtr5g099180 Medicago truncatula HOM05D004231 ORTHO05D004814 2.8e-120 436.0 344 70.6
AUR62013177 Chenopodium quinoa HOM05D004231 ORTHO05D004814 8.3e-120 434.5 367 66.5
Phvul.008G292300 Phaseolus vulgaris HOM05D004231 ORTHO05D004814 5.4e-119 431.8 367 66.2
Psat2g000680 Pisum sativum HOM05D004231 ORTHO05D004814 5.4e-119 431.8 336 70.5
ATR0177G062 Amborella trichopoda HOM05D004231 ORTHO05D004814 1.2e-118 430.6 373 63.0
Psat2g000800 Pisum sativum HOM05D004231 ORTHO05D004814 2.7e-118 429.5 327 70.3
Glyma.14G001000 Glycine max HOM05D004231 ORTHO05D004814 1.0e-117 427.6 321 72.9
Carub.0007s0500 Capsella rubella HOM05D004231 ORTHO05D004814 5.0e-117 425.2 338 68.9
MBI18_g17319_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 1.1e-116 424.1 331 68.9
HPP92_007738 Vanilla planifolia HOM05D004231 ORTHO05D004814 1.2e-113 414.1 327 67.9
SHI25239 Sapria himalayana HOM05D004231 ORTHO05D004814 5.4e-111 405.2 337 68.2
Gohir.A03G170800 Gossypium hirsutum HOM05D004231 ORTHO05D004814 3.8e-109 399.1 307 70.4
Gorai.005G216700 Gossypium raimondii HOM05D004231 ORTHO05D004814 1.9e-108 396.7 367 61.0
Gohir.D02G193900 Gossypium hirsutum HOM05D004231 ORTHO05D004814 2.5e-108 396.4 307 69.7
AUR62010176 Chenopodium quinoa HOM05D004231 ORTHO05D004814 8.9e-106 387.9 367 57.5
GSVIVG01023624001 Vitis vinifera HOM05D004231 ORTHO05D004814 6.4e-104 381.7 367 61.9
Pp3c5_14900 Physcomitrium patens HOM05D004231 ORTHO05D004814 5.9e-102 375.2 333 63.4
BcaC06g36249 Brassica carinata HOM05D004231 ORTHO05D004814 9.5e-100 367.9 324 66.0
Os02g0831800 Oryza sativa ssp. japonica HOM05D004231 ORTHO05D004814 1.8e-98 363.6 346 57.5
Cpa.g.sc60.14 Carica papaya HOM05D004231 ORTHO05D004814 4.0e-98 362.5 368 60.9
Mapoly0173s0009 Marchantia polymorpha HOM05D004231 ORTHO05D004814 1.5e-97 360.5 327 60.9
BcaB03g16477 Brassica carinata HOM05D004231 ORTHO05D004814 9.2e-95 351.3 276 70.3
Lj9P408T30 Lonicera japonica HOM05D004231 ORTHO05D004814 3.9e-93 345.9 247 77.7
SMO351G0181 Selaginella moellendorffii HOM05D004231 ORTHO05D004814 2.1e-91 340.1 352 57.7
CBR_g2798 Chara braunii HOM05D004385 ORTHO05D005245 2.3e-90 336.7 342 56.1
MBI10_g41732_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 1.6e-86 323.9 297 57.2
THA.LOC104807405 Tarenaya hassleriana HOM05D004231 ORTHO05D004814 3.9e-85 319.3 244 72.5
CARHR243620 Cardamine hirsuta HOM05D004231 ORTHO05D004814 8.6e-85 318.2 287 64.8
MBI15_g18193_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 9.5e-84 314.7 344 56.4
ATR0810G109 Amborella trichopoda HOM05D004231 ORTHO05D004814 2.6e-81 306.6 357 53.5
COL.COLO4_34312 Corchorus olitorius HOM05D000109 ORTHO05D000520 4.9e-80 302.4 320 55.0
Atru.chr5.3561 Acer truncatum HOM05D004231 ORTHO05D004814 6.4e-80 302.0 206 73.8
Cre02.g082250 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 3.2e-79 299.7 324 54.9
SEGI_38009 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 2.1e-70 270.4 234 59.8
TAR625G1260 Trochodendron aralioides HOM05D004231 ORTHO05D004814 7.9e-62 241.9 209 61.2
Cre02.g082200 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 3.3e-52 209.9 208 56.2
Dinv20762 Davidia involucrata HOM05D004231 ORTHO05D004814 1.9e-44 184.1 130 71.5
SMO231G0001 Selaginella moellendorffii HOM05D004231 ORTHO05D004814 2.6e-41 173.7 164 56.1
Atru.chr5.3560 Acer truncatum HOM05D004231 ORTHO05D004814 5.5e-39 166.0 125 68.8
Sabra09G0130700 Salix brachista HOM05D004231 ORTHO05D004814 2.2e-32 144.1 164 52.4
VMungo0331G0717 Vigna mungo HOM05D004231 ORTHO05D004814 6.5e-32 142.5 102 67.6
TAR625G0010 Trochodendron aralioides HOM05D004231 ORTHO05D004814 3.6e-30 136.7 89 71.9
VMungo0647G1050 Vigna mungo HOM05D004231 ORTHO05D004814 5.1e-29 132.9 146 52.7
Actinidia26328 Actinidia chinensis HOM05D004231 ORTHO05D004814 1.2e-25 121.7 128 52.3
arahy.Tifrunner.gnm1.ann1.H05BEB Arachis hypogaea HOM05D004231 ORTHO05D004814 4.5e-25 119.8 99 58.6
QL06p003747 Quercus lobata HOM05D003236 ORTHO05D003620 7.2e-23 112.5 123 47.2
BcaB08g34718 Brassica carinata HOM05D004231 ORTHO05D004814 8.0e-22 109.0 78 69.2
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 6.7e-21 105.9 295 29.8
SEGI_19463 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 8.8e-21 105.5 114 50.9
QL03p013131 Quercus lobata HOM05D004231 ORTHO05D004814 3.3e-20 103.6 80 61.2
QL08p042586 Quercus lobata HOM05D004231 ORTHO05D004814 9.7e-20 102.1 124 46.0
BcaC06g34170 Brassica carinata HOM05D004231 ORTHO05D004814 1.8e-18 97.8 64 75.0
BcaB08g34717 Brassica carinata HOM05D004231 ORTHO05D004814 8.5e-16 89.0 116 45.7
PRCOL_00006973 Prasinoderma coloniale HOM05D004231 ORTHO05D004814 3.2e-15 87.0 204 34.3
MCO14G367 Micromonas commoda HOM05D004231 ORTHO05D004814 7.2e-15 85.9 321 30.5
TAR625G0853 Trochodendron aralioides HOM05D000369 ORTHO05D000253 5.2e-13 79.7 176 36.9
SEGI_37911 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 1.7e-11 74.7 50 66.0
Lsat_1_v5_gn_2_1161 Lactuca sativa HOM05D004231 ORTHO05D004814 3.1e-10 70.5 54 63.0
FAN05G5401 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.3e-08 65.1 49 55.1
FAN07G1153 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.7e-08 64.7 43 67.4
FAN15G0284 Fragaria x ananassa HOM05D004231 ORTHO05D004814 2.9e-08 63.9 46 58.7
FAN23G0549 Fragaria x ananassa HOM05D004231 ORTHO05D004814 2.9e-08 63.9 78 43.6
FAN23G1162 Fragaria x ananassa HOM05D004231 ORTHO05D004814 2.9e-08 63.9 78 43.6
AT4G35295 Arabidopsis thaliana HOM05D004231 ORTHO05D004814 3.8e-08 63.5 62 56.5
FvH4_3g29830 Fragaria vesca HOM05D004126 ORTHO05D004818 6.5e-08 62.8 43 62.8
FAN05G3570 Fragaria x ananassa HOM05D004231 ORTHO05D004814 3.2e-07 60.5 46 56.5
FAN25G3338 Fragaria x ananassa HOM05D004231 ORTHO05D004814 3.2e-07 60.5 51 49.0
BolC7t43738H Brassica oleracea HOM05D004231 ORTHO05D004814 7.2e-07 59.3 37 73.0
C07p31950 Brassica napus HOM05D004231 ORTHO05D004814 2.1e-06 57.8 37 70.3
Cre02.g082150 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 3.6e-06 57.0 44 61.4
BcaB08g35109 Brassica carinata HOM05D004231 ORTHO05D004814 4.7e-06 56.6 40 65.0


User provided reference genes

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