Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G6317 Papaver somniferum HOM05D007576 ORTHO05D009576 2.4e-265 918.3 476 100.0
PSO675G5421 Papaver somniferum HOM05D007576 ORTHO05D009576 8.1e-245 850.1 477 92.9
Nn1g06600 Nelumbo nucifera HOM05D007576 ORTHO05D009576 5.4e-116 422.2 471 52.2
Aqoxy1G02531 Aquilegia oxysepala HOM05D007576 ORTHO05D009576 2.1e-112 410.2 485 51.3
Aqoxy1G02534 Aquilegia oxysepala HOM05D007576 ORTHO05D009576 2.1e-112 410.2 485 51.3
Cfa000420 Carpinus fangiana HOM05D007576 ORTHO05D009576 2.0e-110 403.7 489 50.1
Dinv07540 Davidia involucrata HOM05D007576 ORTHO05D009576 6.0e-107 392.1 474 50.4
Potri.011G050600 Populus trichocarpa HOM05D007576 ORTHO05D009576 1.3e-106 391.0 394 56.9
Sabra11G0034500 Salix brachista HOM05D007576 ORTHO05D009576 3.9e-106 389.4 396 56.6
CiPaw.09G057800 Carya illinoinensis HOM05D007576 ORTHO05D009576 1.5e-105 387.5 475 50.1
QL05p039732 Quercus lobata HOM05D007576 ORTHO05D009576 1.9e-105 387.1 477 49.9
Manes.17G043700 Manihot esculenta HOM05D007576 ORTHO05D009576 9.6e-105 384.8 484 49.8
CSS0005805 Camellia sinensis var. sinensis HOM05D007576 ORTHO05D009576 1.7e-101 374.0 507 47.7
MBI18_g17005_MAGBIO Magnolia biondii HOM05D007576 ORTHO05D009576 2.2e-101 373.6 538 47.2
RhsimUnG0044800 Rhododendron simsii HOM05D007576 ORTHO05D009576 2.9e-101 373.2 406 53.9
FAN16G1901 Fragaria x ananassa HOM05D007576 ORTHO05D009576 4.9e-101 372.5 482 48.5
FAN21G0504 Fragaria x ananassa HOM05D007576 ORTHO05D009576 2.4e-100 370.2 481 47.4
Ciclev10014397m.g Citrus clementina HOM05D007576 ORTHO05D009576 4.2e-100 369.4 476 48.1
FAN25G3788 Fragaria x ananassa HOM05D007576 ORTHO05D009576 4.2e-100 369.4 485 47.4
FAN11G2000 Fragaria x ananassa HOM05D007576 ORTHO05D009576 1.6e-99 367.5 482 47.9
FvH4_3g04910 Fragaria vesca HOM05D007576 ORTHO05D009576 7.9e-99 365.2 475 48.6
TWI38G1553 Tripterygium wilfordii HOM05D007576 ORTHO05D009576 6.7e-98 362.1 400 52.5
GSVIVG01002036001 Vitis vinifera HOM05D007576 ORTHO05D009576 2.5e-97 360.1 312 63.8
RcHm_v2.0_Chr5g0008071 Rosa chinensis HOM05D007576 ORTHO05D009576 7.4e-97 358.6 409 52.3
CANSAT35G0220 Cannabis sativa HOM05D007576 ORTHO05D009576 4.8e-96 355.9 459 48.8
Ca_21702_v3 Cicer arietinum L. HOM05D007576 ORTHO05D009576 1.4e-95 354.4 419 50.4
Glyma.05G009500 Glycine max HOM05D007576 ORTHO05D009576 1.8e-95 354.0 466 48.1
Duzib192G1068 Durio zibethinus HOM05D007576 ORTHO05D009576 2.4e-95 353.6 454 46.3
Medtr4g113740 Medicago truncatula HOM05D007576 ORTHO05D009576 5.3e-95 352.4 462 49.4
MELO3C007295.2 Cucumis melo HOM05D007576 ORTHO05D009576 6.9e-95 352.1 464 47.0
VMungo1215G0476 Vigna mungo HOM05D007576 ORTHO05D009576 6.9e-95 352.1 398 50.5
ClCG01G022850 Citrullus lanatus HOM05D007576 ORTHO05D009576 2.6e-94 350.1 475 47.2
MD05G1314800 Malus domestica HOM05D007576 ORTHO05D009576 2.6e-94 350.1 482 46.5
Eucgr.E03347 Eucalyptus grandis HOM05D007576 ORTHO05D009576 4.5e-94 349.4 476 45.6
Thecc.06G190300 Theobroma cacao HOM05D007576 ORTHO05D009576 4.5e-94 349.4 482 45.6
CsaV3_6G050020 Cucumis sativus L. HOM05D007576 ORTHO05D009576 5.8e-94 349.0 482 47.1
Lj1A1207T83 Lonicera japonica HOM05D007576 ORTHO05D009576 5.8e-94 349.0 442 47.7
Glyma.17G117500 Glycine max HOM05D007576 ORTHO05D009576 1.3e-93 347.8 460 47.2
Lj4g0015142 Lotus japonicus HOM05D007576 ORTHO05D009576 1.3e-93 347.8 478 47.5
Lalb_Chr13g0302021 Lupinus albus HOM05D007576 ORTHO05D009576 3.8e-93 346.3 456 48.0
Psat4g041840 Pisum sativum HOM05D007576 ORTHO05D009576 4.9e-93 345.9 414 50.2
MD10G1296200 Malus domestica HOM05D007576 ORTHO05D009576 8.4e-93 345.1 464 46.1
Phvul.003G161900 Phaseolus vulgaris HOM05D007576 ORTHO05D009576 1.4e-92 344.4 399 51.4
Prupe.4G044400 Prunus persica HOM05D007576 ORTHO05D009576 1.4e-92 344.4 487 45.2
DCAR_008044 Daucus carota HOM05D007576 ORTHO05D009576 2.5e-92 343.6 392 51.5
SGA_v2.0_scaffold7G03972 Striga asiatica HOM05D007576 ORTHO05D009576 5.5e-92 342.4 393 51.1
COL.COLO4_31497 Corchorus olitorius HOM05D007576 ORTHO05D009576 7.1e-92 342.0 487 44.4
Cpa.g.sc1598.2 Carica papaya HOM05D007576 ORTHO05D009576 2.7e-91 340.1 471 46.9
TPR.G10703 Trifolium pratense HOM05D007576 ORTHO05D009576 4.6e-91 339.3 340 56.5
Sed0017500 Sechium edule HOM05D007576 ORTHO05D009576 1.3e-90 337.8 386 51.0
arahy.Tifrunner.gnm1.ann1.TJT9YV Arachis hypogaea HOM05D007576 ORTHO05D009576 1.8e-90 337.4 399 51.4
Gorai.010G153000 Gossypium raimondii HOM05D007576 ORTHO05D009576 3.9e-90 336.3 458 44.5
Gohir.A06G126300 Gossypium hirsutum HOM05D007576 ORTHO05D009576 5.1e-90 335.9 483 44.3
CDE01G0107 Ceratophyllum demersum HOM05D007576 ORTHO05D009576 8.7e-90 335.1 315 58.7
arahy.Tifrunner.gnm1.ann1.TJX0PA Arachis hypogaea HOM05D007576 ORTHO05D009576 3.3e-89 333.2 399 51.1
Peaxi162Scf00947g00422 Petunia axillaris HOM05D007576 ORTHO05D009576 3.3e-89 333.2 437 46.5
Gohir.D06G131100 Gossypium hirsutum HOM05D007576 ORTHO05D009576 4.8e-88 329.3 483 43.3
AUR62014798 Chenopodium quinoa HOM05D007576 ORTHO05D009576 1.8e-87 327.4 473 43.8
AUR62016989 Chenopodium quinoa HOM05D007576 ORTHO05D009576 2.4e-87 327.0 416 47.4
Nitab4.5_0009493g0040 Nicotiana tabacum HOM05D007576 ORTHO05D009576 4.1e-87 326.2 447 46.5
Sc05g0007790 Simmondsia chinensis HOM05D007576 ORTHO05D009576 4.1e-87 326.2 469 43.1
EL10Ac8g20358 Beta vulgaris HOM05D007576 ORTHO05D009576 6.9e-87 325.5 421 47.7
ECA234G2395 Erigeron canadensis HOM05D007576 ORTHO05D009576 1.2e-86 324.7 287 62.4
ATR0680G038 Amborella trichopoda HOM05D007576 ORTHO05D009576 4.5e-86 322.8 423 45.6
Hund21235 Selenicereus undatus HOM05D007576 ORTHO05D009576 1.0e-85 321.6 332 53.9
Nitab4.5_0001357g0010 Nicotiana tabacum HOM05D007576 ORTHO05D009576 2.9e-85 320.1 441 45.1
HanXRQChr16g0518181 Helianthus annuus HOM05D007576 ORTHO05D009576 3.8e-85 319.7 325 55.7
Oeu038219.1 Olea europaea HOM05D007576 ORTHO05D009576 3.8e-85 319.7 242 66.9
Lsat_1_v5_gn_4_52541 Lactuca sativa HOM05D007576 ORTHO05D009576 1.4e-84 317.8 326 55.2
SalBow8G3709 Salvia bowleyana HOM05D007576 ORTHO05D009576 1.4e-84 317.8 440 45.9
MSTRG.15916 Avicennia marina HOM05D007576 ORTHO05D009576 3.2e-84 316.6 414 45.9
Sopen02g023320 Solanum pennellii HOM05D007576 ORTHO05D009576 7.2e-84 315.5 393 47.1
Ah.14g089350 Amaranthus hybridus HOM05D007576 ORTHO05D009576 1.6e-83 314.3 328 55.2
PGSC0003DMG400022439 Solanum tuberosum HOM05D007576 ORTHO05D009576 6.1e-83 312.4 393 47.3
CAN.G1164.10 Capsicum annuum HOM05D007576 ORTHO05D009576 7.9e-83 312.0 387 47.5
Os06g0731700 Oryza sativa ssp. japonica HOM05D007576 ORTHO05D009576 1.8e-82 310.8 287 55.4
Migut.M01192 Erythranthe guttata HOM05D007576 ORTHO05D009576 3.0e-82 310.1 397 48.6
Cc02_g13130 Coffea canephora HOM05D007576 ORTHO05D009576 8.7e-82 308.5 396 48.7
Zm00001eb229030 Zea mays HOM05D007576 ORTHO05D009576 8.7e-82 308.5 309 55.0
HPP92_014806 Vanilla planifolia HOM05D007576 ORTHO05D009576 5.3e-79 299.3 311 53.4
PGR042G0577 Punica granatum HOM05D007576 ORTHO05D009576 3.2e-76 290.0 392 46.2
Haze_06496 Corylus avellana HOM05D007576 ORTHO05D009576 1.4e-68 264.6 377 43.5
Ciclev10008775m.g Citrus clementina HOM05D007576 ORTHO05D009576 3.0e-66 256.9 312 50.6
CSS0010553 Camellia sinensis var. sinensis HOM05D007576 ORTHO05D009576 1.4e-63 248.1 274 52.9
Pp3c11_25570 Physcomitrium patens HOM05D007576 ORTHO05D009576 8.8e-58 228.8 256 49.2
Mapoly0181s0007 Marchantia polymorpha HOM05D007576 ORTHO05D009576 1.3e-53 214.9 460 35.0
Ciclev10009735m.g Citrus clementina HOM05D007576 ORTHO05D009576 1.6e-46 191.4 158 62.7
Duzib235G0673 Durio zibethinus HOM05D007576 ORTHO05D009576 8.6e-45 185.7 158 60.1
Atru.chr10.1919 Acer truncatum HOM05D007576 ORTHO05D009576 8.3e-32 142.5 332 36.7
CBR_g49326 Chara braunii HOM05D007576 ORTHO05D000002 1.5e-28 131.7 233 37.8
Lj2g0021670 Lotus japonicus HOM05D007576 ORTHO05D009576 3.3e-28 130.6 192 45.8
Solyc02g078470.4 Solanum lycopersicum HOM05D007576 ORTHO05D009576 6.8e-26 122.9 100 61.0
Atru.chr10.1928 Acer truncatum HOM05D007576 ORTHO05D009576 1.0e-21 109.0 334 31.4
SEGI_32076 Sequoiadendron giganteum HOM05D007576 ORTHO05D009576 5.2e-18 96.7 87 57.5
ECA247G2871 Erigeron canadensis HOM05D000526 ORTHO05D000956 4.9e-16 90.1 221 35.3
Cre13.g589167 Chlamydomonas reinhardtii HOM05D007576 ORTHO05D009576 3.2e-07 60.8 260 25.0
MCO14G177 Micromonas commoda HOM05D004623 ORTHO05D005100 7.8e-06 56.2 137 29.9


User provided reference genes

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