Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G6268 Papaver somniferum HOM05D007505 ORTHO05D009476 3.4e-83 311.6 156 100.0
PSO675G7842 Papaver somniferum HOM05D007505 ORTHO05D009476 5.6e-78 294.3 156 95.5
Ciclev10022689m.g Citrus clementina HOM05D007505 ORTHO05D009476 3.0e-31 139.0 153 53.6
RcHm_v2.0_Chr7g0192551 Rosa chinensis HOM05D007505 ORTHO05D009476 2.0e-30 136.3 152 53.9
TAR371G0969 Trochodendron aralioides HOM05D007505 ORTHO05D009476 2.5e-30 136.0 152 55.9
Cpa.g.sc159.18 Carica papaya HOM05D007505 ORTHO05D009476 1.7e-29 133.3 147 50.3
Solyc03g112190.4 Solanum lycopersicum HOM05D002460 ORTHO05D002716 1.4e-28 130.2 151 49.7
FvH4_5g06310 Fragaria vesca HOM05D007505 ORTHO05D009476 2.4e-28 129.4 150 49.3
Sopen03g031290 Solanum pennellii HOM05D007505 ORTHO05D009476 3.1e-28 129.0 151 49.0
FAN08G0495 Fragaria x ananassa HOM05D007505 ORTHO05D009476 4.1e-28 128.6 150 49.3
FAN18G1005 Fragaria x ananassa HOM05D007505 ORTHO05D009476 5.3e-28 128.3 150 49.3
Atru.chr9.2580 Acer truncatum HOM05D007505 ORTHO05D009476 9.1e-28 127.5 139 54.7
Actinidia19362 Actinidia chinensis HOM05D007505 ORTHO05D009476 9.1e-28 127.5 150 50.7
Potri.015G084200 Populus trichocarpa HOM05D007505 ORTHO05D009476 9.1e-28 127.5 158 50.0
Thecc.03G026000 Theobroma cacao HOM05D007505 ORTHO05D009476 1.2e-27 127.1 149 51.0
CAN.G338.34 Capsicum annuum HOM05D007505 ORTHO05D009476 1.5e-27 126.7 149 47.7
FAN13G2123 Fragaria x ananassa HOM05D007505 ORTHO05D009476 4.5e-27 125.2 150 48.7
QL10p006874 Quercus lobata HOM05D007505 ORTHO05D009476 1.3e-26 123.6 148 51.4
MD14G1171300 Malus domestica HOM05D007505 ORTHO05D009476 1.7e-26 123.2 151 47.0
Cfa019221 Carpinus fangiana HOM05D007505 ORTHO05D009476 2.2e-26 122.9 147 48.3
Oeu040858.1 Olea europaea HOM05D007505 ORTHO05D009476 2.2e-26 122.9 151 51.7
TWI23G0126 Tripterygium wilfordii HOM05D007505 ORTHO05D009476 2.2e-26 122.9 145 51.7
Cfa019219 Carpinus fangiana HOM05D007505 ORTHO05D009476 2.9e-26 122.5 147 48.3
PGSC0003DMG400018186 Solanum tuberosum HOM05D007505 ORTHO05D009476 2.9e-26 122.5 151 46.4
vmacro19295 Vaccinium macrocarpon HOM05D007505 ORTHO05D009476 5.0e-26 121.7 149 52.3
Dinv38525 Davidia involucrata HOM05D007505 ORTHO05D009476 6.5e-26 121.3 146 53.4
Nitab4.5_0010452g0040 Nicotiana tabacum HOM05D002460 ORTHO05D002716 6.5e-26 121.3 142 47.2
Rhsim08G0177900 Rhododendron simsii HOM05D007505 ORTHO05D009476 8.5e-26 120.9 150 50.7
Haze_07589 Corylus avellana HOM05D007505 ORTHO05D009476 1.4e-25 120.2 148 49.3
Glyma.17G084500 Glycine max HOM05D007505 ORTHO05D009476 1.9e-25 119.8 153 47.1
Cc04_g11490 Coffea canephora HOM05D007505 ORTHO05D009476 2.5e-25 119.4 144 50.0
Sabra15G0107300 Salix brachista HOM05D007505 ORTHO05D009476 3.2e-25 119.0 156 46.2
Glyma.05G041700 Glycine max HOM05D007505 ORTHO05D009476 4.2e-25 118.6 149 45.0
Gorai.003G115400 Gossypium raimondii HOM05D007505 ORTHO05D009476 4.2e-25 118.6 148 50.0
Prupe.5G165400 Prunus persica HOM05D007505 ORTHO05D009476 5.5e-25 118.2 151 48.3
Aqoxy5G03745 Aquilegia oxysepala HOM05D007505 ORTHO05D009476 7.2e-25 117.9 139 53.2
Oeu023645.1 Olea europaea HOM05D007505 ORTHO05D009476 7.2e-25 117.9 140 53.6
ECA247G3499 Erigeron canadensis HOM05D007505 ORTHO05D009476 9.4e-25 117.5 149 51.0
Gohir.D03G109300 Gossypium hirsutum HOM05D007505 ORTHO05D009476 9.4e-25 117.5 148 49.3
SGA_v2.0_scaffold90G27839 Striga asiatica HOM05D007505 ORTHO05D009476 9.4e-25 117.5 145 49.7
Peaxi162Scf00089g01341 Petunia axillaris HOM05D002460 ORTHO05D002716 1.2e-24 117.1 129 48.8
Gohir.A03G057100 Gossypium hirsutum HOM05D007505 ORTHO05D009476 1.6e-24 116.7 145 49.0
Hma1.2p1_0046F.1_g027150 Hydrangea macrophylla HOM05D007505 ORTHO05D009476 6.1e-24 114.8 137 49.6
Lalb_Chr12g0201901 Lupinus albus HOM05D007505 ORTHO05D009476 1.8e-23 113.2 152 44.7
VMungo1215G0926 Vigna mungo HOM05D007505 ORTHO05D009476 3.9e-23 112.1 152 44.1
Migut.O00159 Erythranthe guttata HOM05D007505 ORTHO05D009476 6.7e-23 111.3 157 43.3
CiPaw.11G019500 Carya illinoinensis HOM05D007505 ORTHO05D009476 8.8e-23 110.9 149 44.3
PGR083G2149 Punica granatum HOM05D007505 ORTHO05D009476 8.8e-23 110.9 146 49.3
Nitab4.5_0000003g0840 Nicotiana tabacum HOM05D007505 ORTHO05D009476 1.1e-22 110.5 150 44.0
Lsat_1_v5_gn_1_27760 Lactuca sativa HOM05D007505 ORTHO05D009476 1.5e-22 110.2 135 46.7
COL.COLO4_36758 Corchorus olitorius HOM05D007505 ORTHO05D009476 2.0e-22 109.8 159 45.9
Potri.012G086000 Populus trichocarpa HOM05D007505 ORTHO05D009476 2.0e-22 109.8 153 43.1
TAR629G2155 Trochodendron aralioides HOM05D001124 ORTHO05D001004 4.4e-22 108.6 98 59.2
Lj4g0014699 Lotus japonicus HOM05D007505 ORTHO05D009476 1.3e-21 107.1 156 42.9
CSS0021026 Camellia sinensis var. sinensis HOM05D007505 ORTHO05D009476 1.7e-21 106.7 136 47.8
Medtr4g104870 Medicago truncatula HOM05D007505 ORTHO05D009476 1.7e-21 106.7 138 44.2
MD06G1165700 Malus domestica HOM05D007505 ORTHO05D009476 2.2e-21 106.3 143 45.5
Manes.06G110400 Manihot esculenta HOM05D007505 ORTHO05D009476 3.7e-21 105.5 154 46.1
SalBow5G2951 Salvia bowleyana HOM05D007505 ORTHO05D009476 6.3e-21 104.8 136 47.8
HanXRQChr02g0035811 Helianthus annuus HOM05D007505 ORTHO05D009476 1.1e-20 104.0 141 47.5
Nitab4.5_0008713g0030 Nicotiana tabacum HOM05D007505 ORTHO05D009476 1.1e-20 104.0 142 43.7
Nitab4.5_0001793g0050 Nicotiana tabacum HOM05D002460 ORTHO05D002716 1.4e-20 103.6 128 46.1
TPR.G37551 Trifolium pratense HOM05D007505 ORTHO05D009476 1.4e-20 103.6 130 46.2
Nn4g22591 Nelumbo nucifera HOM05D007505 ORTHO05D009476 1.8e-20 103.2 137 51.8
Psat4g060840 Pisum sativum HOM05D007505 ORTHO05D009476 1.8e-20 103.2 138 44.2
MELO3C002298.2 Cucumis melo HOM05D007505 ORTHO05D009476 3.1e-20 102.4 135 45.2
ClCG03G003000 Citrullus lanatus HOM05D007505 ORTHO05D009476 4.1e-20 102.1 141 46.1
CANSAT80G2368 Cannabis sativa HOM05D007505 ORTHO05D009476 5.3e-20 101.7 157 42.7
AUR62028725 Chenopodium quinoa HOM05D007505 ORTHO05D009476 5.3e-20 101.7 145 45.5
Eucgr.B00218 Eucalyptus grandis HOM05D007505 ORTHO05D009476 7.0e-20 101.3 155 43.9
Duzib205G0367 Durio zibethinus HOM05D007505 ORTHO05D009476 1.5e-19 100.1 100 54.0
MBI16_g31776_MAGBIO Magnolia biondii HOM05D007505 ORTHO05D009476 2.6e-19 99.4 159 44.7
Potri.012G086300 Populus trichocarpa HOM05D007505 ORTHO05D009476 3.5e-19 99.0 105 49.5
Nn3g16691 Nelumbo nucifera HOM05D007505 ORTHO05D009476 4.5e-19 98.6 133 49.6
Rhsim12G0168000 Rhododendron simsii HOM05D007505 ORTHO05D009476 4.5e-19 98.6 123 48.0
arahy.Tifrunner.gnm1.ann1.33YNZL Arachis hypogaea HOM05D007505 ORTHO05D009476 5.9e-19 98.2 125 45.6
DCAR_021591 Daucus carota HOM05D007505 ORTHO05D009476 1.0e-18 97.4 149 43.6
Sed0000715 Sechium edule HOM05D007505 ORTHO05D009476 1.0e-18 97.4 139 45.3
AUR62008143 Chenopodium quinoa HOM05D007505 ORTHO05D009476 1.3e-18 97.1 148 43.2
CsaV3_1G008840 Cucumis sativus L. HOM05D007505 ORTHO05D009476 2.2e-18 96.3 135 43.0
Phvul.003G205200 Phaseolus vulgaris HOM05D007505 ORTHO05D009476 2.9e-18 95.9 100 49.0
Sabra12G0061800 Salix brachista HOM05D007505 ORTHO05D009476 5.0e-18 95.1 120 42.5
EL10Ac5g10655 Beta vulgaris HOM05D007505 ORTHO05D009476 2.1e-16 89.7 136 42.6
Sc04g0001500 Simmondsia chinensis HOM05D007505 ORTHO05D009476 1.8e-15 86.7 121 44.6
Hma1.2p1_1092F.1_g255960 Hydrangea macrophylla HOM05D007505 ORTHO05D009476 1.5e-14 83.6 79 53.2
ATR0824G199 Amborella trichopoda HOM05D007505 ORTHO05D009476 9.7e-14 80.9 122 41.8
BcaNung07358 Brassica carinata HOM05D007505 ORTHO05D009476 1.7e-13 80.1 150 41.3
Dinv20598 Davidia involucrata HOM05D007505 ORTHO05D009476 1.7e-13 80.1 87 49.4
BolC7t45867H Brassica oleracea HOM05D000464 ORTHO05D000408 3.7e-13 79.0 130 41.5
C01p20030 Brassica napus HOM05D006209 ORTHO05D007645 6.3e-13 78.2 132 43.2
BraA03t14621Z Brassica rapa HOM05D000464 ORTHO05D000408 6.3e-13 78.2 150 39.3
A01p16040 Brassica napus HOM05D006209 ORTHO05D007645 8.2e-13 77.8 132 43.2
BraA01t01538Z Brassica rapa HOM05D007505 ORTHO05D009476 1.1e-12 77.4 149 38.9
BolC1t01930H Brassica oleracea HOM05D006209 ORTHO05D007645 1.4e-12 77.0 130 40.8
AL7G28500 Arabidopsis lyrata HOM05D007505 ORTHO05D009476 2.4e-12 76.3 150 40.0
BcaC09g50839 Brassica carinata HOM05D007505 ORTHO05D009476 2.4e-12 76.3 152 40.1
unitig_61.g26472 Utricularia gibba HOM05D007505 ORTHO05D009476 3.1e-12 75.9 138 39.1
Thhalv10026466m.g Eutrema salsugineum HOM05D007505 ORTHO05D009476 4.1e-12 75.5 131 41.2
A03p55480 Brassica napus HOM05D007505 ORTHO05D009476 5.3e-12 75.1 130 40.0
Carub.0007s1636 Capsella rubella HOM05D007505 ORTHO05D009476 7.0e-12 74.7 151 39.1
AT4G24700 Arabidopsis thaliana HOM05D007505 ORTHO05D009476 9.1e-12 74.3 151 40.4
THA.LOC104825178 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 9.1e-12 74.3 156 38.5
THA.LOC104800396 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 1.6e-11 73.6 150 39.3
THA.LOC104800397 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 1.6e-11 73.6 150 39.3
Duzib068G0261 Durio zibethinus HOM05D007505 ORTHO05D009476 2.6e-11 72.8 89 50.6
CARHR232080 Cardamine hirsuta HOM05D007505 ORTHO05D009476 7.7e-11 71.2 147 38.8
Zm00001eb246040 Zea mays HOM05D007505 ORTHO05D009476 1.0e-10 70.9 142 38.0
Os02g0595200 Oryza sativa ssp. japonica HOM05D007505 ORTHO05D009476 3.8e-10 68.9 163 32.5
HPP92_004606 Vanilla planifolia HOM05D007505 ORTHO05D009476 2.7e-08 62.8 93 41.9
BcaC06g32867 Brassica carinata HOM05D007505 ORTHO05D009476 5.2e-07 58.5 101 39.6


User provided reference genes

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