Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G6022 Papaver somniferum HOM05D004157 ORTHO05D004860 4.8e-146 521.2 267 100.0
PSO675G5417 Papaver somniferum HOM05D004157 ORTHO05D004860 2.0e-139 499.2 267 95.5
TAR381G0601 Trochodendron aralioides HOM05D004157 ORTHO05D004860 2.8e-109 399.1 265 75.1
PGR142G1140 Punica granatum HOM05D004157 ORTHO05D004860 1.2e-107 393.7 267 72.7
Nn5g30153 Nelumbo nucifera HOM05D004157 ORTHO05D004860 4.4e-107 391.7 266 74.8
Hma1.2p1_1385F.1_g279670 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 5.8e-107 391.3 267 74.9
Aqoxy5G01458 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 1.7e-106 389.8 264 75.0
Potri.004G167200 Populus trichocarpa HOM05D004157 ORTHO05D004860 8.3e-106 387.5 264 73.5
GSVIVG01024109001 Vitis vinifera HOM05D004157 ORTHO05D004860 2.4e-105 386.0 264 72.0
PGR042G1356 Punica granatum HOM05D004157 ORTHO05D004860 3.2e-105 385.6 264 73.1
CANSAT25G0852 Cannabis sativa HOM05D004157 ORTHO05D004860 2.0e-104 382.9 264 72.3
MD10G1116600 Malus domestica HOM05D004157 ORTHO05D004860 4.6e-104 381.7 264 71.6
Actinidia32087 Actinidia chinensis HOM05D004157 ORTHO05D004860 7.8e-104 380.9 264 73.9
QL11p047455 Quercus lobata HOM05D004157 ORTHO05D004860 7.8e-104 380.9 259 73.7
PSO675G3214 Papaver somniferum HOM05D004157 ORTHO05D004860 1.0e-103 380.6 267 73.4
TWI79G0156 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 3.0e-103 379.0 264 72.0
PSO541G4423 Papaver somniferum HOM05D004157 ORTHO05D004860 5.0e-103 378.3 267 73.0
Prupe.8G159400 Prunus persica HOM05D004157 ORTHO05D004860 5.0e-103 378.3 264 71.2
Thecc.02G068100 Theobroma cacao HOM05D004157 ORTHO05D004860 1.5e-102 376.7 264 70.8
TWI75G1232 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 1.9e-102 376.3 262 72.1
RcHm_v2.0_Chr6g0245651 Rosa chinensis HOM05D004157 ORTHO05D004860 3.3e-102 375.6 264 70.8
Gorai.005G251900 Gossypium raimondii HOM05D004157 ORTHO05D004860 4.3e-102 375.2 264 70.8
Gohir.A03G202800 Gossypium hirsutum HOM05D004157 ORTHO05D004860 5.6e-102 374.8 264 70.1
vmacro22690 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 7.3e-102 374.4 267 71.9
HPP92_002547 Vanilla planifolia HOM05D004157 ORTHO05D004860 7.3e-102 374.4 275 72.4
Eucgr.G01748 Eucalyptus grandis HOM05D004157 ORTHO05D004860 1.6e-101 373.2 264 72.0
ECA234G4736 Erigeron canadensis HOM05D004157 ORTHO05D004860 4.7e-101 371.7 265 70.9
FAN24G0875 Fragaria x ananassa HOM05D004157 ORTHO05D004860 8.1e-101 370.9 264 69.7
FvH4_2g02150 Fragaria vesca HOM05D004157 ORTHO05D004860 1.4e-100 370.2 264 69.7
Sabra09G0098500 Salix brachista HOM05D004157 ORTHO05D004860 1.4e-100 370.2 264 71.2
MSTRG.5432 Avicennia marina HOM05D004157 ORTHO05D004860 1.8e-100 369.8 267 70.8
Gohir.D02G224100 Gossypium hirsutum HOM05D004157 ORTHO05D004860 2.3e-100 369.4 264 69.3
Cfa005173 Carpinus fangiana HOM05D004157 ORTHO05D004860 8.9e-100 367.5 248 73.8
Sopen01g053120 Solanum pennellii HOM05D004157 ORTHO05D004860 1.2e-99 367.1 270 68.5
COL.COLO4_17245 Corchorus olitorius HOM05D004157 ORTHO05D004860 2.0e-99 366.3 301 64.5
Migut.I00211 Erythranthe guttata HOM05D004157 ORTHO05D004860 2.0e-99 366.3 267 70.8
Solyc01g111060.4 Solanum lycopersicum HOM05D004157 ORTHO05D004860 2.0e-99 366.3 270 68.9
Cc02_g16620 Coffea canephora HOM05D004157 ORTHO05D004860 2.6e-99 365.9 269 70.3
EL10Ac9g21458 Beta vulgaris HOM05D004157 ORTHO05D004860 4.4e-99 365.2 264 69.7
CiPaw.06G125600 Carya illinoinensis HOM05D000447 ORTHO05D000315 4.4e-99 365.2 249 73.5
PGSC0003DMG400001636 Solanum tuberosum HOM05D004157 ORTHO05D004860 9.8e-99 364.0 270 68.5
FAN20G1131 Fragaria x ananassa HOM05D004157 ORTHO05D004860 1.7e-98 363.2 264 68.9
Sc18g0006720 Simmondsia chinensis HOM05D004157 ORTHO05D004860 6.4e-98 361.3 267 70.8
Lsat_1_v5_gn_3_45521 Lactuca sativa HOM05D004157 ORTHO05D004860 7.1e-97 357.8 255 72.2
Actinidia00586 Actinidia chinensis HOM05D004157 ORTHO05D004860 9.2e-97 357.5 269 69.5
vmacro17385 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 2.1e-96 356.3 283 64.7
Atru.chr5.3210 Acer truncatum HOM05D004157 ORTHO05D004860 2.7e-96 355.9 249 73.5
HanXRQChr10g0294891 Helianthus annuus HOM05D004157 ORTHO05D004860 2.7e-96 355.9 247 71.3
Eucgr.G01749 Eucalyptus grandis HOM05D004157 ORTHO05D004860 4.6e-96 355.1 266 71.1
Medtr3g117700 Medicago truncatula HOM05D004157 ORTHO05D004860 4.6e-96 355.1 252 70.6
TPR.G38481 Trifolium pratense HOM05D004157 ORTHO05D004860 4.6e-96 355.1 245 73.1
Psat5g003520 Pisum sativum HOM05D004157 ORTHO05D004860 6.0e-96 354.8 252 71.0
Lj1g0011325 Lotus japonicus HOM05D004157 ORTHO05D004860 7.8e-96 354.4 267 67.4
unitig_0.g2353 Utricularia gibba HOM05D004157 ORTHO05D004860 1.0e-95 354.0 267 67.0
Phvul.009G000600 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 1.7e-95 353.2 245 72.2
Lalb_Chr11g0061251 Lupinus albus HOM05D004157 ORTHO05D004860 3.0e-95 352.4 246 71.1
Aqoxy2G00577 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 3.9e-95 352.1 252 71.8
Peaxi162Scf00362g01054 Petunia axillaris HOM05D004157 ORTHO05D004860 6.6e-95 351.3 267 68.2
Glyma.06G005600 Glycine max HOM05D004157 ORTHO05D004860 8.6e-95 350.9 263 67.3
MELO3C013382.2 Cucumis melo HOM05D004157 ORTHO05D004860 1.5e-94 350.1 248 71.4
Manes.04G078800 Manihot esculenta HOM05D004157 ORTHO05D004860 1.5e-94 350.1 229 74.7
arahy.Tifrunner.gnm1.ann1.391TM2 Arachis hypogaea HOM05D004157 ORTHO05D004860 1.9e-94 349.7 251 69.3
arahy.Tifrunner.gnm1.ann1.66CLCN Arachis hypogaea HOM05D004157 ORTHO05D004860 1.9e-94 349.7 251 69.3
Glyma.04G005900 Glycine max HOM05D004157 ORTHO05D004860 2.5e-94 349.4 262 67.9
vmacro02241 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 2.5e-94 349.4 274 66.1
CsaV3_7G000760 Cucumis sativus L. HOM05D004157 ORTHO05D004860 3.3e-94 349.0 257 70.0
Os06g0112200 Oryza sativa ssp. japonica HOM05D004157 ORTHO05D004860 7.3e-94 347.8 267 67.0
Lj5A185T60 Lonicera japonica HOM05D004157 ORTHO05D004860 9.5e-94 347.4 267 67.0
VMungo1309G1201 Vigna mungo HOM05D004157 ORTHO05D004860 1.2e-93 347.1 265 66.8
Oeu055643.1 Olea europaea HOM05D004157 ORTHO05D004860 2.8e-93 345.9 234 73.1
unitig_21.g20017 Utricularia gibba HOM05D004157 ORTHO05D004860 6.2e-93 344.7 251 69.7
Ah.01g009470 Amaranthus hybridus HOM05D004157 ORTHO05D004860 1.1e-92 344.0 284 63.0
DCAR_028937 Daucus carota HOM05D004157 ORTHO05D004860 4.0e-92 342.0 246 69.1
THA.LOC104807783 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 4.0e-92 342.0 265 65.7
SGA_v2.0_scaffold80G25867 Striga asiatica HOM05D004157 ORTHO05D004860 1.2e-91 340.5 237 74.3
AT4G38800 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 1.5e-91 340.1 266 64.3
Thhalv10025990m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 3.4e-91 339.0 265 64.2
Sed0001494 Sechium edule HOM05D000447 ORTHO05D000315 4.4e-91 338.6 232 72.4
Nitab4.5_0000283g0220 Nicotiana tabacum HOM05D004157 ORTHO05D004860 7.6e-91 337.8 261 69.0
AL7G10670 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 1.3e-90 337.0 265 64.2
ClCG02G004360 Citrullus lanatus HOM05D000447 ORTHO05D000315 1.3e-90 337.0 248 70.2
Thhalv10026821m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 1.7e-90 336.7 264 65.5
Carub.0007s0065 Capsella rubella HOM05D004157 ORTHO05D004860 2.2e-90 336.3 268 63.1
Sed0017382 Sechium edule HOM05D004157 ORTHO05D004860 2.2e-90 336.3 231 72.3
Ca_15317_v3 Cicer arietinum L. HOM05D000600 ORTHO05D004860 4.9e-90 335.1 235 71.5
Lj9A389T64 Lonicera japonica HOM05D004157 ORTHO05D004860 1.9e-89 333.2 216 76.4
CAN.G588.18 Capsicum annuum HOM05D004157 ORTHO05D004860 2.4e-89 332.8 234 71.4
A08p16520 Brassica napus HOM05D004157 ORTHO05D004860 3.2e-89 332.4 264 64.4
DCAR_003693 Daucus carota HOM05D004157 ORTHO05D004860 4.1e-89 332.0 353 53.8
Sp7g32610 Schrenkiella parvula HOM05D004157 ORTHO05D004860 4.1e-89 332.0 254 66.1
CARHR247930 Cardamine hirsuta HOM05D004157 ORTHO05D004860 1.2e-88 330.5 265 62.6
BcaC01g00866 Brassica carinata HOM05D004157 ORTHO05D004860 2.1e-88 329.7 267 63.3
AL7G16370 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 2.7e-88 329.3 254 65.4
Oeu002957.1 Olea europaea HOM05D004157 ORTHO05D004860 4.6e-88 328.6 221 75.1
THA.LOC104819635 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 6.0e-88 328.2 267 61.4
BolC3t20826H Brassica oleracea HOM05D004157 ORTHO05D004860 7.8e-88 327.8 267 62.9
Carub.0007s0546 Capsella rubella HOM05D004157 ORTHO05D004860 1.7e-87 326.6 247 66.4
HanXRQChr11g0346651 Helianthus annuus HOM05D004157 ORTHO05D004860 1.7e-87 326.6 247 66.0
BcaB03g11807 Brassica carinata HOM05D004157 ORTHO05D004860 3.0e-87 325.9 264 63.3
BcaC01g00256 Brassica carinata HOM05D004157 ORTHO05D004860 3.0e-87 325.9 264 63.3
C03p85360 Brassica napus HOM05D004157 ORTHO05D004860 3.0e-87 325.9 267 62.5
ATR0089G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 6.6e-87 324.7 213 76.1
Duzib052G0280 Durio zibethinus HOM05D004157 ORTHO05D004860 8.6e-87 324.3 263 63.9
Zm00001eb036610 Zea mays HOM05D004157 ORTHO05D004860 1.1e-86 323.9 249 66.7
CARHR243130 Cardamine hirsuta HOM05D004157 ORTHO05D004860 1.9e-86 323.2 247 68.0
AUR62010110 Chenopodium quinoa HOM05D004157 ORTHO05D004860 1.9e-86 323.2 320 56.9
VMungo1309G1253 Vigna mungo HOM05D004157 ORTHO05D004860 1.9e-86 323.2 245 66.5
A08p24000 Brassica napus HOM05D004157 ORTHO05D004860 2.5e-86 322.8 264 63.6
ATR0095G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 3.3e-86 322.4 213 75.6
C03p77330 Brassica napus HOM05D004157 ORTHO05D004860 3.3e-86 322.4 264 63.6
BraA08t34357Z Brassica rapa HOM05D004157 ORTHO05D004860 4.3e-86 322.0 277 61.0
Aa31LG2G15700 Aethionema arabicum HOM05D004157 ORTHO05D004860 7.3e-86 321.2 263 63.1
Aa31LG6G16410 Aethionema arabicum HOM05D004157 ORTHO05D004860 6.2e-85 318.2 298 57.0
Duzib132G0743 Durio zibethinus HOM05D004157 ORTHO05D004860 8.1e-85 317.8 264 62.1
BolC3t19986H Brassica oleracea HOM05D004157 ORTHO05D004860 1.1e-84 317.4 278 60.1
Glyma.06G005700 Glycine max HOM05D004157 ORTHO05D004860 1.4e-84 317.0 247 63.6
BcaB03g12226 Brassica carinata HOM05D004157 ORTHO05D004860 2.4e-84 316.2 265 61.5
Prupe.8G159500 Prunus persica HOM05D004157 ORTHO05D004860 3.1e-84 315.8 273 61.9
PGR042G3985 Punica granatum HOM05D004157 ORTHO05D004860 5.2e-84 315.1 257 61.1
Hund00051 Selenicereus undatus HOM05D004157 ORTHO05D004860 3.4e-83 312.4 213 74.2
Zm00001eb175180 Zea mays HOM05D004157 ORTHO05D004860 1.7e-82 310.1 249 65.1
Lsat_1_v5_gn_1_62181 Lactuca sativa HOM05D004157 ORTHO05D004860 2.2e-82 309.7 239 63.2
Actinidia27843 Actinidia chinensis HOM05D004157 ORTHO05D004860 2.9e-82 309.3 254 65.4
Phvul.009G000700 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 1.9e-81 306.6 267 59.2
Cpa.g.sc37.201 Carica papaya HOM05D004157 ORTHO05D004860 1.2e-80 303.9 264 61.0
CDE02G2528 Ceratophyllum demersum HOM05D004157 ORTHO05D004860 1.6e-80 303.5 267 59.6
SHI05673 Sapria himalayana HOM05D004157 ORTHO05D004860 4.6e-80 302.0 212 71.2
Eucgr.G01750 Eucalyptus grandis HOM05D004157 ORTHO05D004860 1.0e-79 300.8 245 62.9
Ciclev10029225m.g Citrus clementina HOM05D004157 ORTHO05D004860 1.7e-79 300.1 249 63.5
SGA_v2.0_scaffold32G13240 Striga asiatica HOM05D004157 ORTHO05D004860 7.3e-78 294.7 266 60.5
Potri.009G128700 Populus trichocarpa HOM05D004157 ORTHO05D004860 6.9e-76 288.1 198 70.2
Sp7g37020 Schrenkiella parvula HOM05D004157 ORTHO05D004860 1.3e-74 283.9 265 60.0
AT4G34840 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 8.4e-74 281.2 204 69.6
AUR62013103 Chenopodium quinoa HOM05D004157 ORTHO05D004860 4.6e-72 275.4 184 76.6
vmacro22693 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 3.9e-71 272.3 305 49.5
Rhsim11G0186900 Rhododendron simsii HOM05D004157 ORTHO05D004860 1.5e-70 270.4 206 65.0
SEGI_37242 Sequoiadendron giganteum HOM05D004157 ORTHO05D004860 1.1e-68 264.2 226 59.3
Pp3c1_20870 Physcomitrium patens HOM05D004157 ORTHO05D004860 1.4e-68 263.8 244 54.9
Pp3c14_1450 Physcomitrium patens HOM05D004157 ORTHO05D004860 2.4e-68 263.1 243 55.6
Mapoly0026s0093 Marchantia polymorpha HOM05D004157 ORTHO05D004860 2.0e-67 260.0 242 55.0
BraA08t33620Z Brassica rapa HOM05D004157 ORTHO05D004860 9.9e-67 257.7 198 65.2
Rhsim05G0063700 Rhododendron simsii HOM05D004157 ORTHO05D004860 1.7e-66 256.9 196 70.4
AagrBONN_evm.TU.Sc2ySwM_368.2286 Anthoceros agrestis HOM05D004157 ORTHO05D004860 2.3e-63 246.5 245 52.2
SMO147G0350 Selaginella moellendorffii HOM05D004157 ORTHO05D004860 5.1e-63 245.4 252 50.0
Pp3c26_5320 Physcomitrium patens HOM05D004157 ORTHO05D004860 6.7e-63 245.0 234 53.4
Dinv04975 Davidia involucrata HOM05D000600 ORTHO05D000432 4.0e-60 235.7 142 78.2
PGR042G2276 Punica granatum HOM05D004157 ORTHO05D004860 9.0e-60 234.6 267 51.3
Cre03.g162550 Chlamydomonas reinhardtii HOM05D004157 ORTHO05D004860 2.1e-53 213.4 234 46.6
Nitab4.5_0000980g0360 Nicotiana tabacum HOM05D004157 ORTHO05D004860 3.7e-53 212.6 147 75.5
vmacro02237 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.5e-51 207.2 205 58.0
MCO15G557 Micromonas commoda HOM05D004157 ORTHO05D004860 1.1e-49 201.1 239 44.4
Rhsim11G0185600 Rhododendron simsii HOM05D004157 ORTHO05D004860 1.3e-47 194.1 194 55.7
Rhsim11G0186700 Rhododendron simsii HOM05D004157 ORTHO05D004860 3.2e-41 172.9 166 57.2
Eucgr.L03396 Eucalyptus grandis HOM05D004157 ORTHO05D004860 7.2e-41 171.8 104 76.9
SalBow3G1540 Salvia bowleyana HOM05D004157 ORTHO05D004860 1.4e-39 167.5 122 69.7
Hma1.2p1_0032F.1_g019710 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 2.5e-33 146.7 148 58.1
MBI09_g11914_MAGBIO Magnolia biondii HOM05D004157 ORTHO05D004860 3.6e-32 142.9 103 72.8
TAR625G0759 Trochodendron aralioides HOM05D004157 ORTHO05D004860 7.9e-32 141.7 100 76.0
TAR625G0858 Trochodendron aralioides HOM05D004157 ORTHO05D004860 3.5e-27 126.3 172 45.9
Haze_02206 Corylus avellana HOM05D000447 ORTHO05D000315 1.1e-25 121.3 99 66.7
PRCOL_00006969 Prasinoderma coloniale HOM05D004157 ORTHO05D004860 1.0e-23 114.8 239 32.6
Medtr0173s0020 Medicago truncatula HOM05D004157 ORTHO05D004860 4.0e-23 112.8 83 69.9
C07p63580 Brassica napus HOM05D004157 ORTHO05D004860 2.6e-22 110.2 119 51.3
BolC7t46771H Brassica oleracea HOM05D004157 ORTHO05D004860 2.6e-22 110.2 119 51.3
SalBow3G3146 Salvia bowleyana HOM05D004157 ORTHO05D004860 1.1e-20 104.8 144 43.1
arahy.Tifrunner.gnm1.ann1.R1P6K1 Arachis hypogaea HOM05D004157 ORTHO05D004860 4.5e-19 99.4 160 39.4
Glyma.04G006001 Glycine max HOM05D004157 ORTHO05D004860 2.5e-17 93.6 66 62.1
Rhsim01G0041000 Rhododendron simsii HOM05D004157 ORTHO05D004860 5.7e-14 82.4 64 65.6
Aqoxy6G02338 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 2.2e-13 80.5 84 54.8
CBR_g20180 Chara braunii HOM05D004157 ORTHO05D004860 4.1e-12 76.3 126 38.9
vmacro02118 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 4.1e-12 76.3 68 57.4
HPP92_002565 Vanilla planifolia HOM05D004157 ORTHO05D004860 3.2e-09 66.6 123 43.1
Rhsim11G0185500 Rhododendron simsii HOM05D004157 ORTHO05D004860 3.0e-07 60.1 31 67.7


User provided reference genes

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