Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G5977 Papaver somniferum HOM05D005586 ORTHO05D007044 0.0e+00 1264.2 650 100.0
PSO063G4043 Papaver somniferum HOM05D005586 ORTHO05D007044 4.1e-284 981.1 650 79.4
PSO170G6484 Papaver somniferum HOM05D005586 ORTHO05D007044 1.6e-283 979.2 650 79.2
TAR383G0761 Trochodendron aralioides HOM05D005586 ORTHO05D007044 3.8e-245 851.7 650 69.2
Aqoxy7G02326 Aquilegia oxysepala HOM05D005586 ORTHO05D007044 4.9e-245 851.3 653 70.0
TAR626G0800 Trochodendron aralioides HOM05D005586 ORTHO05D007044 4.9e-245 851.3 652 69.2
Dinv41251 Davidia involucrata HOM05D005586 ORTHO05D007044 3.6e-235 818.5 640 67.8
TWI60G0698 Tripterygium wilfordii HOM05D005586 ORTHO05D007044 6.1e-235 817.8 661 66.1
RcHm_v2.0_Chr4g0402481 Rosa chinensis HOM05D005586 ORTHO05D007044 3.0e-234 815.5 655 66.6
CSS0030464 Camellia sinensis var. sinensis HOM05D005586 ORTHO05D007044 3.9e-234 815.1 640 67.7
Atru.chr7.639 Acer truncatum HOM05D005586 ORTHO05D007044 4.8e-232 808.1 656 66.3
Prupe.2G007900 Prunus persica HOM05D005586 ORTHO05D007044 2.4e-231 805.8 660 65.6
CiPaw.07G192200 Carya illinoinensis HOM05D005586 ORTHO05D007044 4.1e-231 805.1 657 65.0
Dinv25464 Davidia involucrata HOM05D005586 ORTHO05D007044 4.1e-231 805.1 640 67.0
ClCG06G013320 Citrullus lanatus HOM05D005586 ORTHO05D007044 5.3e-231 804.7 653 65.1
FAN18G4074 Fragaria x ananassa HOM05D005586 ORTHO05D007044 5.3e-231 804.7 658 65.5
Nn4g25000 Nelumbo nucifera HOM05D005586 ORTHO05D007044 5.3e-231 804.7 631 69.6
Lj4g0013239 Lotus japonicus HOM05D005586 ORTHO05D007044 9.1e-231 803.9 650 65.1
MELO3C017465.2 Cucumis melo HOM05D005586 ORTHO05D007044 1.2e-230 803.5 653 64.6
FvH4_5g27790 Fragaria vesca HOM05D005586 ORTHO05D007044 1.2e-230 803.5 658 65.3
Ca_21173_v3 Cicer arietinum L. HOM05D005586 ORTHO05D007044 1.5e-230 803.1 651 65.9
Ca_21222_v3 Cicer arietinum L. HOM05D005586 ORTHO05D007044 1.5e-230 803.1 651 65.9
COL.COLO4_33680 Corchorus olitorius HOM05D005586 ORTHO05D007044 2.6e-230 802.4 658 64.1
FAN08G2362 Fragaria x ananassa HOM05D005586 ORTHO05D007044 2.6e-230 802.4 655 65.5
Duzib168G0896 Durio zibethinus HOM05D005586 ORTHO05D007044 1.7e-229 799.7 654 64.7
Sed0005590 Sechium edule HOM05D005586 ORTHO05D007044 3.2e-228 795.4 651 64.8
CANSAT11G2700 Cannabis sativa HOM05D005586 ORTHO05D007044 5.5e-228 794.7 656 64.2
Rhsim07G0149700 Rhododendron simsii HOM05D005586 ORTHO05D007044 7.2e-228 794.3 640 66.6
CsaV3_1G031580 Cucumis sativus L. HOM05D005586 ORTHO05D007044 1.2e-227 793.5 653 64.0
Gohir.A08G084500 Gossypium hirsutum HOM05D005586 ORTHO05D007044 1.2e-227 793.5 658 64.1
Potri.006G168200 Populus trichocarpa HOM05D005586 ORTHO05D007044 2.1e-227 792.7 667 64.2
Sabra06G0129800 Salix brachista HOM05D005586 ORTHO05D007044 3.6e-227 792.0 668 64.2
DCAR_017968 Daucus carota HOM05D005586 ORTHO05D007044 7.9e-227 790.8 651 65.9
Lalb_Chr12g0199381 Lupinus albus HOM05D005586 ORTHO05D007044 7.9e-227 790.8 654 65.3
Medtr4g128210 Medicago truncatula HOM05D005586 ORTHO05D007044 7.9e-227 790.8 651 65.1
CSS0000496 Camellia sinensis var. sinensis HOM05D005586 ORTHO05D007044 1.0e-226 790.4 640 66.2
Lj9P685T24 Lonicera japonica HOM05D005586 ORTHO05D007044 1.8e-226 789.6 651 65.3
Gorai.004G099900 Gossypium raimondii HOM05D005586 ORTHO05D007044 2.3e-226 789.3 658 63.8
Lj7P472T26 Lonicera japonica HOM05D005586 ORTHO05D007044 6.7e-226 787.7 653 64.9
QL02p097708 Quercus lobata HOM05D005586 ORTHO05D007044 1.1e-225 786.9 654 64.1
Glyma.20G083600 Glycine max HOM05D005586 ORTHO05D007044 2.6e-225 785.8 651 65.1
Glyma.17G063500 Glycine max HOM05D005586 ORTHO05D007044 4.4e-225 785.0 651 64.8
Sed0016049 Sechium edule HOM05D005586 ORTHO05D007044 5.7e-225 784.6 653 63.7
Psat0s509g0200 Pisum sativum HOM05D005586 ORTHO05D007044 7.4e-225 784.3 651 64.8
Ah.14g083790 Amaranthus hybridus HOM05D005586 ORTHO05D007044 2.8e-224 782.3 650 63.7
Ciclev10007551m.g Citrus clementina HOM05D005586 ORTHO05D007044 8.2e-224 780.8 659 64.5
Haze_22099 Corylus avellana HOM05D005586 ORTHO05D007044 1.4e-223 780.0 655 64.7
Cfa013507 Carpinus fangiana HOM05D005586 ORTHO05D007044 4.1e-223 778.5 656 64.3
THA.LOC104811789 Tarenaya hassleriana HOM05D005586 ORTHO05D007044 7.0e-223 777.7 657 64.5
MBI03_g13495_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 8.5e-221 770.8 655 64.0
Phvul.003G146100 Phaseolus vulgaris HOM05D005586 ORTHO05D007044 1.1e-220 770.4 651 64.1
MSTRG.6212 Avicennia marina HOM05D005586 ORTHO05D007044 1.9e-220 769.6 652 62.9
ECA234G4574 Erigeron canadensis HOM05D005586 ORTHO05D007044 2.5e-220 769.2 651 63.6
arahy.Tifrunner.gnm1.ann1.F5X18S Arachis hypogaea HOM05D005586 ORTHO05D007044 4.2e-220 768.5 654 63.1
MD13G1254800 Malus domestica HOM05D005586 ORTHO05D007044 4.2e-220 768.5 645 65.7
Eucgr.C02307 Eucalyptus grandis HOM05D005586 ORTHO05D007044 7.2e-220 767.7 657 62.3
EL10Ac8g18286 Beta vulgaris HOM05D005586 ORTHO05D007044 2.7e-219 765.8 660 62.4
Thecc.09G173100 Theobroma cacao HOM05D005586 ORTHO05D007044 3.6e-219 765.4 639 64.6
Cc06_g13260 Coffea canephora HOM05D005586 ORTHO05D007044 4.7e-219 765.0 653 63.4
Cpa.g.sc95.50 Carica papaya HOM05D005586 ORTHO05D007044 6.1e-219 764.6 636 64.8
Hma1.2p1_1025F.1_g249260 Hydrangea macrophylla HOM05D005586 ORTHO05D007044 5.2e-218 761.5 596 67.6
Solyc10g078790.1 Solanum lycopersicum HOM05D005586 ORTHO05D007044 8.8e-218 760.8 654 62.4
Sopen10g029410 Solanum pennellii HOM05D005586 ORTHO05D007044 8.8e-218 760.8 654 62.4
PGSC0003DMG400011415 Solanum tuberosum HOM05D005586 ORTHO05D007044 2.0e-217 759.6 654 62.2
GSVIVG01029208001 Vitis vinifera HOM05D005586 ORTHO05D007044 2.6e-217 759.2 651 64.4
Peaxi162Scf00231g00064 Petunia axillaris HOM05D005586 ORTHO05D007044 2.2e-216 756.1 656 62.3
VMungo1215G0758 Vigna mungo HOM05D005586 ORTHO05D007044 2.2e-216 756.1 638 65.0
PGR102G3328 Punica granatum HOM05D005586 ORTHO05D007044 3.7e-216 755.4 652 62.7
Nitab4.5_0000730g0080 Nicotiana tabacum HOM05D005586 ORTHO05D007044 6.3e-216 754.6 656 62.0
Aa31LG3G13340 Aethionema arabicum HOM05D005586 ORTHO05D007044 1.4e-215 753.4 657 62.4
Manes.14G153700 Manihot esculenta HOM05D005586 ORTHO05D007044 3.1e-215 752.3 642 64.0
Carub.0008s1797 Capsella rubella HOM05D005586 ORTHO05D007044 5.3e-215 751.5 663 62.1
CARHR271250 Cardamine hirsuta HOM05D005586 ORTHO05D007044 4.5e-214 748.4 668 61.4
Lsat_1_v5_gn_5_84680 Lactuca sativa HOM05D005586 ORTHO05D007044 5.9e-214 748.0 655 62.7
BcaB01g04458 Brassica carinata HOM05D005586 ORTHO05D007044 2.2e-213 746.1 659 61.6
CAN.G1161.32 Capsicum annuum HOM05D005586 ORTHO05D007044 2.2e-213 746.1 656 61.9
AT5G57460 Arabidopsis thaliana HOM05D005586 ORTHO05D007044 3.8e-213 745.3 665 61.5
Sc08g0005320 Simmondsia chinensis HOM05D005586 ORTHO05D007044 3.8e-213 745.3 650 62.2
Oeu025223.1 Olea europaea HOM05D005586 ORTHO05D007044 5.0e-213 745.0 651 62.1
AL8G33420 Arabidopsis lyrata HOM05D005586 ORTHO05D007044 1.9e-212 743.0 661 61.9
BraA10t43568Z Brassica rapa HOM05D005586 ORTHO05D007044 4.2e-212 741.9 657 62.6
Sp6g19170 Schrenkiella parvula HOM05D005586 ORTHO05D007044 9.4e-212 740.7 659 61.2
BcaB08g36100 Brassica carinata HOM05D005586 ORTHO05D007044 2.7e-211 739.2 658 62.3
Nitab4.5_0004134g0010 Nicotiana tabacum HOM05D005586 ORTHO05D007044 6.1e-211 738.0 645 62.5
C03p14980 Brassica napus HOM05D005586 ORTHO05D007044 1.8e-210 736.5 662 61.5
Nitab4.5_0000455g0040 Nicotiana tabacum HOM05D005586 ORTHO05D007044 1.8e-210 736.5 645 62.0
Migut.J01477 Erythranthe guttata HOM05D005586 ORTHO05D007044 2.3e-210 736.1 653 60.2
A10p14890 Brassica napus HOM05D005586 ORTHO05D007044 5.2e-210 734.9 664 61.7
A03p12820 Brassica napus HOM05D005586 ORTHO05D007044 1.2e-209 733.8 660 61.4
Thhalv10015707m.g Eutrema salsugineum HOM05D005586 ORTHO05D007044 1.2e-209 733.8 660 60.6
TPR.G5407 Trifolium pratense HOM05D005586 ORTHO05D007044 1.5e-209 733.4 584 66.1
BolC3t13940H Brassica oleracea HOM05D005586 ORTHO05D007044 2.0e-209 733.0 661 61.3
BraA03t10590Z Brassica rapa HOM05D005586 ORTHO05D007044 2.0e-209 733.0 659 61.3
Oeu009835.1 Olea europaea HOM05D005586 ORTHO05D007044 5.7e-209 731.5 654 61.3
BcaC01g06487 Brassica carinata HOM05D005586 ORTHO05D007044 7.5e-209 731.1 659 61.5
Aa31LG3G220 Aethionema arabicum HOM05D005586 ORTHO05D007044 4.1e-207 725.3 657 61.2
SGA_v2.0_scaffold17G07909 Striga asiatica HOM05D005586 ORTHO05D007044 7.0e-207 724.5 643 60.0
C09p49310 Brassica napus HOM05D005586 ORTHO05D007044 1.2e-206 723.8 663 61.2
BcaC04g19966 Brassica carinata HOM05D005586 ORTHO05D007044 3.5e-206 722.2 664 60.8
MBI14_g17367_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 5.9e-206 721.5 651 59.6
SHI41749 Sapria himalayana HOM05D005586 ORTHO05D007044 1.1e-204 717.2 659 60.4
Gohir.D08G094100 Gossypium hirsutum HOM05D005586 ORTHO05D007044 7.2e-204 714.5 658 59.3
CDE04G2484 Ceratophyllum demersum HOM05D005586 ORTHO05D007044 3.6e-203 712.2 645 60.5
BolC9t57782H Brassica oleracea HOM05D005586 ORTHO05D007044 3.7e-200 702.2 663 60.3
AUR62021301 Chenopodium quinoa HOM05D005586 ORTHO05D007044 9.5e-196 687.6 657 57.4
AUR62033219 Chenopodium quinoa HOM05D005586 ORTHO05D007044 1.8e-194 683.3 654 57.3
ATR0618G120 Amborella trichopoda HOM05D005586 ORTHO05D007044 2.8e-192 676.0 653 57.0
MD13G1254300 Malus domestica HOM05D005586 ORTHO05D007044 3.6e-187 659.1 654 58.6
SEGI_38070 Sequoiadendron giganteum HOM05D005586 ORTHO05D007044 3.1e-186 656.0 658 55.3
Actinidia15717 Actinidia chinensis HOM05D005586 ORTHO05D007044 2.3e-181 639.8 632 57.6
Zm00001eb414690 Zea mays HOM05D005586 ORTHO05D007044 7.3e-180 634.8 655 54.8
MBI18_g04576_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 2.1e-179 633.3 642 57.3
Os08g0243900 Oryza sativa ssp. japonica HOM05D005586 ORTHO05D007044 2.3e-178 629.8 654 54.7
SalBow6G0691 Salvia bowleyana HOM05D005586 ORTHO05D007044 1.9e-175 620.2 653 54.4
Actinidia14649 Actinidia chinensis HOM05D005586 ORTHO05D007044 6.8e-170 601.7 547 60.9
SalBow1G5715 Salvia bowleyana HOM05D005586 ORTHO05D007044 2.0e-169 600.1 655 53.1
Hma1.2p1_3184F.1_g333760 Hydrangea macrophylla HOM05D005586 ORTHO05D007044 3.2e-167 592.8 646 53.9
CDE02G2425 Ceratophyllum demersum HOM05D005586 ORTHO05D007044 8.7e-149 531.6 653 47.9
MBI16_g35931_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 1.3e-144 517.7 552 56.5
BcaC01g06491 Brassica carinata HOM05D005586 ORTHO05D007044 1.2e-142 511.1 634 49.5
Mapoly0111s0055 Marchantia polymorpha HOM05D005586 ORTHO05D007044 3.8e-136 489.6 673 45.0
Pp3c25_4850 Physcomitrium patens HOM05D005586 ORTHO05D007044 1.0e-133 481.5 672 42.9
BcaC01g06494 Brassica carinata HOM05D005586 ORTHO05D007044 3.9e-125 453.0 639 45.4
AagrBONN_evm.TU.Sc2ySwM_368.670 Anthoceros agrestis HOM05D005586 ORTHO05D007044 2.1e-118 430.6 677 40.9
COL.COLO4_04392 Corchorus olitorius HOM05D005586 ORTHO05D007044 2.6e-108 397.1 351 59.3
unitig_899.g14852 Utricularia gibba HOM05D005586 ORTHO05D007044 1.7e-91 341.3 360 56.7
unitig_899.g14851 Utricularia gibba HOM05D005586 ORTHO05D007044 4.7e-86 323.2 243 64.6
SMO228G0090 Selaginella moellendorffii HOM05D005586 ORTHO05D007044 2.3e-77 294.3 405 44.9
HPP92_000781 Vanilla planifolia HOM05D005586 ORTHO05D007044 9.5e-63 245.7 298 49.3
CBR_g26159 Chara braunii HOM05D005586 ORTHO05D000002 7.1e-42 176.4 564 27.7
MD16G1258000 Malus domestica HOM05D005586 ORTHO05D007044 7.6e-36 156.4 118 66.1
QL11p053068 Quercus lobata HOM05D005586 ORTHO05D007044 8.4e-35 152.9 115 72.2
MD16G1258100 Malus domestica HOM05D005586 ORTHO05D007044 2.7e-17 94.7 113 50.4
Oeu013635.1 Olea europaea HOM05D006172 ORTHO05D005515 4.5e-12 77.4 89 48.3
CBR_g26157 Chara braunii HOM05D005586 ORTHO05D007044 1.4e-10 72.4 88 45.5
MBI16_g35934_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 3.2e-10 71.2 51 58.8
MBI16_g35933_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009834 1.0e-08 66.2 44 70.5
SalBow4G0612 Salvia bowleyana HOM05D005586 ORTHO05D360416 5.1e-08 63.9 46 60.9


User provided reference genes

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