Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G5959 Papaver somniferum HOM05D005769 ORTHO05D006851 1.6e-86 322.8 166 100.0
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 6.0e-78 294.3 166 92.8
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 3.1e-34 149.1 174 52.9
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 2.6e-33 146.0 174 52.3
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 6.5e-32 141.4 175 49.7
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 5.5e-31 138.3 170 52.4
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 7.1e-31 137.9 172 52.9
Lj1P869T51 Lonicera japonica HOM05D005769 ORTHO05D006851 6.0e-30 134.8 175 49.7
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 7.9e-30 134.4 172 48.3
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 1.0e-29 134.0 166 51.2
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.8e-29 133.3 179 50.8
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 5.1e-29 131.7 169 50.9
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 6.7e-29 131.3 172 51.7
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 8.7e-29 131.0 166 50.6
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 3.3e-28 129.0 172 48.3
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 7.4e-28 127.9 171 49.7
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 7.4e-28 127.9 168 47.0
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 7.4e-28 127.9 168 47.0
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 9.6e-28 127.5 165 50.9
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 9.6e-28 127.5 170 47.6
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 6.2e-27 124.8 170 48.8
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 1.4e-26 123.6 175 47.4
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 1.4e-26 123.6 174 50.0
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 1.4e-26 123.6 175 46.9
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 1.8e-26 123.2 174 50.6
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 2.4e-26 122.9 175 47.4
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 2.4e-26 122.9 174 45.4
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 2.4e-26 122.9 174 45.4
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 3.1e-26 122.5 172 48.3
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 4.0e-26 122.1 171 48.5
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 5.3e-26 121.7 169 47.9
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 6.9e-26 121.3 172 47.7
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 6.9e-26 121.3 165 44.8
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 9.0e-26 120.9 175 48.6
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 9.0e-26 120.9 174 45.4
Nitab4.5_0000653g0070 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.2e-25 120.6 171 47.4
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 2.6e-25 119.4 170 47.1
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 4.5e-25 118.6 171 48.0
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 5.8e-25 118.2 177 42.4
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 7.6e-25 117.9 173 46.8
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 7.6e-25 117.9 168 48.8
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 7.6e-25 117.9 172 45.9
Cc05_g13510 Coffea canephora HOM05D005769 ORTHO05D006851 1.0e-24 117.5 165 44.8
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 1.0e-24 117.5 171 48.0
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 1.0e-24 117.5 171 44.4
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 1.3e-24 117.1 183 44.8
Nitab4.5_0000749g0110 Nicotiana tabacum HOM05D005769 ORTHO05D006851 2.2e-24 116.3 171 45.6
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 2.9e-24 115.9 173 46.2
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 2.9e-24 115.9 174 44.3
CANSAT21G1553 Cannabis sativa HOM05D005769 ORTHO05D006851 5.0e-24 115.2 166 45.2
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 6.5e-24 114.8 172 43.0
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 1.4e-23 113.6 171 43.3
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 1.9e-23 113.2 174 43.1
Peaxi162Scf01097g00025 Petunia axillaris HOM05D005769 ORTHO05D006851 2.5e-23 112.8 171 45.0
unitig_0.g2389 Utricularia gibba HOM05D005769 ORTHO05D006851 2.5e-23 112.8 164 44.5
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 3.2e-23 112.5 165 43.6
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 4.2e-23 112.1 173 45.1
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 4.2e-23 112.1 170 43.5
Migut.M01783 Erythranthe guttata HOM05D005769 ORTHO05D006851 5.5e-23 111.7 163 44.2
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 7.1e-23 111.3 173 41.6
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 1.2e-22 110.5 181 40.3
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 6.1e-22 108.2 165 43.6
MSTRG.6907 Avicennia marina HOM05D005769 ORTHO05D006851 1.0e-21 107.5 165 43.0
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 1.8e-21 106.7 165 44.8
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 2.3e-21 106.3 172 42.4
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 3.0e-21 105.9 174 42.5
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 3.0e-21 105.9 176 43.2
Nitab4.5_0000397g0340 Nicotiana tabacum HOM05D005769 ORTHO05D006851 3.9e-21 105.5 174 42.5
Aa31LG3G10760 Aethionema arabicum HOM05D005769 ORTHO05D006851 5.1e-21 105.1 166 41.0
ClCG05G014450 Citrullus lanatus HOM05D005769 ORTHO05D006851 5.1e-21 105.1 185 42.2
Migut.H01842 Erythranthe guttata HOM05D005769 ORTHO05D006851 6.7e-21 104.8 169 43.8
Sed0023999 Sechium edule HOM05D005769 ORTHO05D006851 6.7e-21 104.8 171 42.1
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 8.7e-21 104.4 170 41.8
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 8.7e-21 104.4 174 42.0
Nitab4.5_0013016g0010 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.1e-20 104.0 167 43.1
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.9e-20 103.2 174 41.4
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 2.5e-20 102.8 174 41.4
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 2.5e-20 102.8 174 41.4
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea HOM05D005769 ORTHO05D006851 4.3e-20 102.1 172 40.7
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 7.4e-20 101.3 169 42.6
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 9.7e-20 100.9 174 40.8
PGSC0003DMG400001093 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.3e-19 100.5 168 41.7
CAN.G337.106 Capsicum annuum HOM05D005769 ORTHO05D006851 2.8e-19 99.4 171 40.4
HanXRQChr11g0336271 Helianthus annuus HOM05D005769 ORTHO05D006851 3.7e-19 99.0 166 40.4
AUR62015707 Chenopodium quinoa HOM05D005769 ORTHO05D006851 4.8e-19 98.6 168 43.5
Glyma.09G100100 Glycine max HOM05D005769 ORTHO05D006851 4.8e-19 98.6 165 43.0
CARHR268180 Cardamine hirsuta HOM05D005769 ORTHO05D006851 6.3e-19 98.2 188 37.2
ECA236G2121 Erigeron canadensis HOM05D005769 ORTHO05D006851 8.2e-19 97.8 177 37.3
Sed0008399 Sechium edule HOM05D005769 ORTHO05D006851 8.2e-19 97.8 171 42.7
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 1.1e-18 97.4 171 40.9
Sp6g16810 Schrenkiella parvula HOM05D005769 ORTHO05D006851 1.4e-18 97.1 190 37.9
AUR62020499 Chenopodium quinoa HOM05D005769 ORTHO05D006851 5.3e-18 95.1 165 44.2
AT5G54850 Arabidopsis thaliana HOM05D005769 ORTHO05D006851 1.2e-17 94.0 221 33.5
Thhalv10014809m.g Eutrema salsugineum HOM05D005769 ORTHO05D006851 1.2e-17 94.0 190 36.8
AL8G30290 Arabidopsis lyrata HOM05D005769 ORTHO05D006851 1.5e-17 93.6 221 33.5
BcaB08g35851 Brassica carinata HOM05D005769 ORTHO05D006851 1.5e-17 93.6 191 37.7
Sc16g0006260 Simmondsia chinensis HOM05D005769 ORTHO05D006851 1.5e-17 93.6 203 40.4
BcaC04g20292 Brassica carinata HOM05D005769 ORTHO05D006851 2.0e-17 93.2 190 36.3
BolC9t57410H Brassica oleracea HOM05D005769 ORTHO05D006851 2.0e-17 93.2 190 36.3
MELO3C018076.2 Cucumis melo HOM05D005769 ORTHO05D006851 3.4e-17 92.4 172 39.5
CsaV3_3G023280 Cucumis sativus L. HOM05D005769 ORTHO05D006851 3.4e-17 92.4 174 39.1
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 3.4e-17 92.4 143 44.8
Solyc07g064320.3 Solanum lycopersicum HOM05D005769 ORTHO05D006851 3.4e-17 92.4 171 39.8
BraA10t43314Z Brassica rapa HOM05D005769 ORTHO05D006851 4.5e-17 92.0 190 35.8
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 4.5e-17 92.0 145 42.8
PGSC0003DMG400013920 Solanum tuberosum HOM05D005769 ORTHO05D006851 4.5e-17 92.0 171 39.8
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 5.9e-17 91.7 166 43.4
C09p45400 Brassica napus HOM05D005769 ORTHO05D006851 5.9e-17 91.7 190 35.8
Phvul.006G038800 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 7.7e-17 91.3 164 40.9
Sopen07g032470 Solanum pennellii HOM05D005769 ORTHO05D006851 1.3e-16 90.5 171 38.0
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.7e-16 90.1 157 38.9
Oeu062604.3 Olea europaea HOM05D005769 ORTHO05D006851 2.2e-16 89.7 144 43.1
SalBow7G1695 Salvia bowleyana HOM05D005769 ORTHO05D006851 2.9e-16 89.4 170 42.4
Psat2g015240 Pisum sativum HOM05D005769 ORTHO05D006851 8.5e-16 87.8 181 35.9
Carub.0008s1514 Capsella rubella HOM05D005769 ORTHO05D006851 1.1e-15 87.4 190 35.3
A10p12180 Brassica napus HOM05D005769 ORTHO05D006851 1.4e-15 87.0 220 32.7
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 1.9e-15 86.7 167 37.1
SGA_v2.0_scaffold8G04301 Striga asiatica HOM05D005769 ORTHO05D006851 3.6e-14 82.4 161 36.6
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 3.0e-13 79.3 150 38.7
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 5.1e-13 78.6 175 36.6
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 8.8e-13 77.8 169 38.5
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.1e-12 77.4 168 38.1
HanXRQChr05g0159131 Helianthus annuus HOM05D005769 ORTHO05D006851 1.5e-12 77.0 167 37.7
HPP92_014114 Vanilla planifolia HOM05D005769 ORTHO05D006851 3.3e-12 75.9 168 36.9
ATR0752G130 Amborella trichopoda HOM05D005769 ORTHO05D006851 7.4e-12 74.7 196 34.7
Lalb_Chr10g0106921 Lupinus albus HOM05D005769 ORTHO05D006851 1.3e-11 73.9 122 42.6
ECA234G1543 Erigeron canadensis HOM05D005769 ORTHO05D006851 1.4e-10 70.5 155 32.3
Zm00001eb322840 Zea mays HOM05D005769 ORTHO05D006851 1.2e-09 67.4 166 36.1
Cc05_g04810 Coffea canephora HOM05D005769 ORTHO05D006851 2.6e-09 66.2 150 35.3
Lsat_1_v5_gn_5_125321 Lactuca sativa HOM05D005769 ORTHO05D006851 2.5e-07 59.7 167 30.5
HPP92_012395 Vanilla planifolia HOM05D005769 ORTHO05D006851 2.7e-06 56.2 154 27.9


User provided reference genes

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