Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 9.0e-156 553.5 274 100.0
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 4.2e-153 544.7 275 98.9
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 5.5e-105 384.8 275 74.2
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 1.5e-102 376.7 274 70.8
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 4.4e-102 375.2 274 70.4
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 5.7e-102 374.8 274 70.1
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 7.5e-102 374.4 275 70.9
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 3.1e-100 369.0 278 69.4
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 4.1e-100 368.6 275 70.2
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 9.1e-100 367.5 275 69.1
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 9.1e-100 367.5 273 69.2
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 1.2e-99 367.1 287 67.9
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 2.3e-98 362.8 270 70.4
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 2.3e-98 362.8 266 69.5
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 2.9e-98 362.5 276 68.8
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 2.9e-98 362.5 274 69.0
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 6.5e-98 361.3 279 69.2
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 4.2e-97 358.6 290 67.9
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 4.2e-97 358.6 272 69.5
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 1.2e-96 357.1 305 63.6
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 1.2e-96 357.1 283 68.6
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 2.1e-96 356.3 275 68.0
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 3.6e-96 355.5 275 68.7
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 6.1e-96 354.8 274 67.5
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 1.4e-95 353.6 273 68.1
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 2.3e-95 352.8 280 65.7
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 4.0e-95 352.1 286 65.7
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 8.8e-95 350.9 306 64.1
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 1.5e-94 350.1 293 63.1
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 2.0e-94 349.7 276 67.4
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 2.0e-94 349.7 274 65.0
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 5.7e-94 348.2 274 65.3
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 2.2e-93 346.3 273 66.3
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 4.9e-93 345.1 271 67.5
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 6.3e-93 344.7 274 65.3
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 1.4e-92 343.6 271 66.4
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 1.4e-92 343.6 278 64.7
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 1.4e-92 343.6 271 66.8
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 1.4e-92 343.6 277 62.8
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 3.1e-92 342.4 274 65.3
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 4.1e-92 342.0 323 59.8
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 5.4e-92 341.7 274 65.0
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 7.0e-92 341.3 277 65.7
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 7.0e-92 341.3 271 66.4
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 7.0e-92 341.3 271 66.4
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 7.0e-92 341.3 276 63.4
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 7.0e-92 341.3 278 63.7
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 9.2e-92 340.9 271 66.4
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 9.2e-92 340.9 336 58.0
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 2.0e-91 339.7 274 65.7
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 4.5e-91 338.6 276 63.4
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 5.9e-91 338.2 275 64.0
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 7.8e-91 337.8 272 64.3
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 2.9e-90 335.9 274 64.2
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 8.6e-90 334.3 260 66.9
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 4.3e-89 332.0 356 54.2
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 5.6e-89 331.6 274 63.9
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 7.3e-89 331.3 271 61.6
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 2.8e-88 329.3 274 64.6
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 3.6e-88 328.9 273 63.4
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 4.7e-88 328.6 277 61.4
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 2.3e-87 326.2 274 62.8
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 3.0e-87 325.9 224 71.9
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 4.0e-87 325.5 319 58.9
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 4.0e-87 325.5 278 61.2
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 1.5e-86 323.6 286 59.8
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 9.8e-86 320.9 271 62.4
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 1.3e-85 320.5 275 63.6
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 2.2e-85 319.7 286 59.8
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 2.2e-85 319.7 277 61.4
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 3.2e-84 315.8 212 72.2
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 2.0e-83 313.2 268 60.8
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 3.5e-83 312.4 273 61.9
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 3.5e-83 312.4 231 67.5
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 1.5e-81 307.0 276 62.0
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 4.3e-81 305.4 266 62.4
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 2.1e-80 303.1 279 61.6
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 3.6e-80 302.4 248 64.1
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 1.4e-79 300.4 321 55.1
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 2.3e-79 299.7 191 78.0
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 3.1e-79 299.3 195 74.9
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 1.7e-77 293.5 292 56.8
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 4.1e-76 288.9 254 59.1
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 1.3e-74 283.9 204 69.1
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 8.6e-74 281.2 195 72.8
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 3.3e-73 279.3 242 59.9
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 2.1e-72 276.6 272 56.2
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 8.1e-72 274.6 193 72.0
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 5.8e-70 268.5 193 69.9
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 2.9e-69 266.2 186 70.4
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 6.4e-69 265.0 238 58.8
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 1.9e-68 263.5 273 52.4
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 1.2e-67 260.8 193 66.8
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 4.6e-67 258.8 294 50.7
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 1.3e-66 257.3 264 58.0
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 1.9e-65 253.4 216 56.0
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 5.8e-62 241.9 265 48.3
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 7.6e-62 241.5 196 63.8
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 1.9e-57 226.9 292 50.3
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 2.5e-57 226.5 129 80.6
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 9.9e-54 214.5 207 50.2
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 1.3e-53 214.2 217 46.1
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 6.4e-53 211.8 215 50.7
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 1.9e-49 200.3 203 50.2
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 1.1e-47 194.5 184 58.7
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 9.9e-46 188.0 136 67.6
Cfa022135 Carpinus fangiana HOM05D006522 ORTHO05D008183 4.3e-41 172.6 252 36.9
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 7.4e-41 171.8 194 55.2
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.3e-29 134.4 222 40.5
Eucgr.L02916 Eucalyptus grandis HOM05D006522 ORTHO05D008183 6.7e-26 122.1 114 57.0
Aqoxy6G00538 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 2.9e-21 106.7 96 62.5
SHI11627 Sapria himalayana HOM05D006522 ORTHO05D008183 5.0e-21 105.9 98 56.1
SEGI_11019 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 1.9e-20 104.0 56 80.4
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 2.7e-19 100.1 90 54.4
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 6.7e-18 95.5 63 71.4
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 1.1e-17 94.7 90 53.3
AagrBONN_evm.TU.Sc2ySwM_368.3361 Anthoceros agrestis HOM05D006522 ORTHO05D008183 2.4e-15 87.0 92 50.0
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 2.9e-13 80.1 81 61.7
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 8.5e-13 78.6 109 44.0
CDE10G0344 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 2.7e-11 73.6 80 58.8


User provided reference genes

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