Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 4.7e-214 747.7 396 100.0
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 3.3e-191 671.8 406 90.6
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 6.0e-52 209.1 421 42.3
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 2.1e-49 200.7 424 40.3
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 4.8e-49 199.5 435 39.5
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 4.0e-48 196.4 422 40.8
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 4.3e-42 176.4 393 37.7
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 1.3e-38 164.9 394 36.3
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 9.3e-37 158.7 419 35.1
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 2.1e-36 157.5 401 35.7
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 7.9e-36 155.6 395 34.7
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 1.3e-35 154.8 401 36.2
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 1.8e-35 154.5 403 36.7
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 1.3e-33 148.3 399 35.8
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 2.1e-33 147.5 408 35.8
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 6.9e-32 142.5 398 37.7
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 6.9e-32 142.5 396 34.1
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 9.0e-32 142.1 407 31.2
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 1.2e-31 141.7 407 34.9
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 7.6e-31 139.0 374 35.8
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 1.0e-30 138.7 397 33.5
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 3.8e-30 136.7 394 33.2
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 5.0e-30 136.3 371 35.6
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 1.4e-29 134.8 369 35.8
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 4.2e-29 133.3 416 31.7
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 4.2e-29 133.3 394 34.0
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 1.6e-28 131.3 413 35.4
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 2.7e-28 130.6 403 33.3
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 3.5e-28 130.2 387 34.1
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 3.5e-28 130.2 387 34.1
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 2.3e-27 127.5 405 30.9
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 3.0e-27 127.1 402 31.3
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 2.5e-26 124.0 400 29.8
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 3.3e-26 123.6 398 32.7
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 5.7e-26 122.9 401 28.9
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 2.8e-25 120.6 380 31.6
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 2.8e-25 120.6 387 32.3
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 4.8e-25 119.8 380 31.6
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 6.3e-25 119.4 386 33.2
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 6.3e-25 119.4 402 29.4
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 6.3e-25 119.4 385 31.2
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 8.2e-25 119.0 408 30.6
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 1.8e-24 117.9 379 29.3
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 2.4e-24 117.5 380 31.3
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 4.1e-24 116.7 388 29.6
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.2e-23 115.2 386 31.6
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 2.6e-23 114.0 389 30.8
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 5.9e-23 112.8 379 30.1
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 1.0e-22 112.1 310 35.2
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 8.5e-22 109.0 264 36.4
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 1.1e-21 108.6 404 30.7
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 7.2e-21 105.9 393 29.8
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.6e-20 104.8 396 30.1
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 3.6e-20 103.6 386 29.3
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 2.3e-19 100.9 409 31.3
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 3.9e-19 100.1 393 30.3
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 6.7e-19 99.4 411 29.2
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 1.1e-18 98.6 389 26.7
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 3.3e-18 97.1 163 40.5
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 4.3e-18 96.7 380 28.4
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 7.4e-18 95.9 385 29.1
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 3.7e-17 93.6 409 29.6
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 6.3e-17 92.8 390 27.4
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 1.8e-16 91.3 393 28.2
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 5.3e-16 89.7 393 30.0
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 1.2e-15 88.6 233 32.6
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 1.5e-15 88.2 382 26.7
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 1.5e-15 88.2 402 26.9
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 2.0e-15 87.8 386 29.3
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 2.0e-15 87.8 387 26.4
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 2.6e-15 87.4 392 30.4
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 3.4e-15 87.0 394 27.9
Dinv16069 Davidia involucrata HOM05D006874 ORTHO05D008334 3.4e-15 87.0 397 28.2
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 3.4e-15 87.0 398 29.4
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 4.5e-15 86.7 218 33.0
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 4.5e-15 86.7 405 28.4
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 4.5e-15 86.7 375 30.1
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 1.0e-14 85.5 392 30.1
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 2.2e-14 84.3 206 37.9
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 2.2e-14 84.3 408 28.9
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 3.8e-14 83.6 391 30.4
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 5.0e-14 83.2 409 29.3
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.1e-13 82.0 399 28.1
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 1.9e-13 81.3 397 28.2
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 9.4e-13 79.0 405 27.9
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 9.4e-13 79.0 392 29.6
RhsimUnG0041100 Rhododendron simsii HOM05D063883 ORTHO05D008334 1.2e-12 78.6 405 28.9
RhsimUnG0123100 Rhododendron simsii HOM05D063883 ORTHO05D008334 1.2e-12 78.6 405 28.9
Actinidia00356 Actinidia chinensis HOM05D006874 ORTHO05D008334 2.1e-12 77.8 230 36.1
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 2.1e-12 77.8 410 28.5
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 2.1e-12 77.8 396 29.0
Sopen04g031160 Solanum pennellii HOM05D006874 ORTHO05D008334 4.7e-12 76.6 244 28.3
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 6.1e-12 76.3 397 28.7
Psat5g037000 Pisum sativum HOM05D006874 ORTHO05D008334 1.0e-11 75.5 390 27.9
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 1.4e-11 75.1 402 28.6
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 3.0e-11 73.9 167 34.1
VMungo0647G0698 Vigna mungo HOM05D006874 ORTHO05D008334 3.0e-11 73.9 394 28.2
TAR376G0413 Trochodendron aralioides HOM05D006874 ORTHO05D008334 7.4e-10 69.3 173 38.7
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 1.7e-09 68.2 149 36.2
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 2.8e-09 67.4 378 29.1
VMungo1309G0435 Vigna mungo HOM05D006874 ORTHO05D008334 2.8e-09 67.4 404 27.0
Phvul.009G073900 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 8.2e-09 65.9 398 27.9
MSTRG.25026 Avicennia marina HOM05D006874 ORTHO05D008334 1.1e-08 65.5 200 30.0
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 1.4e-08 65.1 385 26.0
SGA_v2.0_scaffold14G07085 Striga asiatica HOM05D000285 ORTHO05D000241 9.1e-08 62.4 120 33.3
COL.COLO4_28465 Corchorus olitorius HOM05D006874 ORTHO05D008334 4.5e-07 60.1 144 38.2
Ciclev10030239m.g Citrus clementina HOM05D006874 ORTHO05D008334 2.9e-06 57.4 139 33.1


User provided reference genes

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