Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G5859 Papaver somniferum HOM05D005724 ORTHO05D006636 2.2e-277 958.7 653 100.0
PSO133G0013 Papaver somniferum HOM05D005724 ORTHO05D006636 1.7e-237 826.2 651 89.9
Aqoxy1G00698 Aquilegia oxysepala HOM05D005724 ORTHO05D006636 3.7e-123 446.4 668 49.3
TAR623G1038 Trochodendron aralioides HOM05D005724 ORTHO05D006636 2.9e-120 436.8 663 45.9
TAR369G1103 Trochodendron aralioides HOM05D005724 ORTHO05D006636 8.5e-120 435.3 661 46.9
Hma1.2p1_0023F.1_g015530 Hydrangea macrophylla HOM05D005724 ORTHO05D006636 2.2e-107 394.0 662 44.1
MBI13_g30854_MAGBIO Magnolia biondii HOM05D005724 ORTHO05D006636 5.3e-106 389.4 677 47.0
CSS0043370 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 2.7e-105 387.1 670 42.5
Actinidia03489 Actinidia chinensis HOM05D005724 ORTHO05D006636 4.5e-105 386.3 668 45.1
Dinv40379 Davidia involucrata HOM05D005724 ORTHO05D006636 4.7e-102 376.3 663 43.4
vmacro00813 Vaccinium macrocarpon HOM05D005724 ORTHO05D006636 5.2e-101 372.9 671 45.2
PGR031G2108 Punica granatum HOM05D005724 ORTHO05D006636 2.0e-100 370.9 685 44.1
DCAR_014109 Daucus carota HOM05D005724 ORTHO05D006636 1.4e-98 364.8 669 42.3
CSS0028855 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 2.9e-96 357.1 465 49.7
Oeu040430.1 Olea europaea HOM05D005724 ORTHO05D006636 1.9e-95 354.4 687 39.3
RhsimUnG0095000 Rhododendron simsii HOM05D005724 ORTHO05D006636 9.5e-95 352.1 678 47.5
Manes.13G004400 Manihot esculenta HOM05D005724 ORTHO05D006636 1.4e-93 348.2 661 43.3
Sc16g0010460 Simmondsia chinensis HOM05D005724 ORTHO05D006636 8.9e-93 345.5 658 41.5
SGA_v2.0_scaffold52G18986 Striga asiatica HOM05D005724 ORTHO05D006636 8.9e-93 345.5 676 43.8
Atru.chr12.1744 Acer truncatum HOM05D005724 ORTHO05D006636 1.3e-91 341.7 682 43.8
Lalb_Chr18g0058031 Lupinus albus HOM05D005724 ORTHO05D006636 1.3e-91 341.7 677 38.6
TWI12G1283 Tripterygium wilfordii HOM05D005724 ORTHO05D006636 5.4e-90 336.3 673 39.2
VMungo0540G1901 Vigna mungo HOM05D005724 ORTHO05D006636 5.4e-90 336.3 690 36.8
CsaV3_4G029120 Cucumis sativus L. HOM05D005724 ORTHO05D006636 9.2e-90 335.5 664 41.0
Ciclev10011241m.g Citrus clementina HOM05D005724 ORTHO05D006636 2.0e-89 334.3 679 41.4
Eucgr.H01410 Eucalyptus grandis HOM05D005724 ORTHO05D006636 2.5e-87 327.4 667 41.8
ATR0307G120 Amborella trichopoda HOM05D005724 ORTHO05D006636 3.3e-87 327.0 657 36.7
Lj6g0014403 Lotus japonicus HOM05D005724 ORTHO05D006636 3.3e-87 327.0 703 42.8
CiPaw.07G081600 Carya illinoinensis HOM05D005724 ORTHO05D006636 9.5e-87 325.5 669 38.9
CDE09G0189 Ceratophyllum demersum HOM05D005724 ORTHO05D006636 1.2e-86 325.1 400 52.2
Ca_00849_v3 Cicer arietinum L. HOM05D005724 ORTHO05D006636 1.2e-86 325.1 611 36.3
Glyma.09G025000 Glycine max HOM05D005724 ORTHO05D006636 6.1e-86 322.8 693 42.0
SalBow2G0175 Salvia bowleyana HOM05D005724 ORTHO05D006636 1.8e-85 321.2 678 47.1
CAN.G219.49 Capsicum annuum HOM05D005724 ORTHO05D006636 2.3e-85 320.9 659 41.3
Glyma.15G131100 Glycine max HOM05D005724 ORTHO05D006636 3.1e-85 320.5 695 39.7
Sabra01G0096300 Salix brachista HOM05D005724 ORTHO05D006636 4.0e-85 320.1 649 38.8
Phvul.006G127600 Phaseolus vulgaris HOM05D005724 ORTHO05D006636 1.2e-84 318.5 699 38.8
unitig_46.g18493 Utricularia gibba HOM05D005724 ORTHO05D006636 6.4e-83 312.8 674 38.7
Nn2g11375 Nelumbo nucifera HOM05D005724 ORTHO05D006636 8.3e-83 312.4 574 43.9
Psat0s1379g0200 Pisum sativum HOM05D005724 ORTHO05D006636 4.1e-82 310.1 634 35.8
Prupe.6G362700 Prunus persica HOM05D005724 ORTHO05D006636 7.0e-82 309.3 689 46.9
Nitab4.5_0000193g0130 Nicotiana tabacum HOM05D005724 ORTHO05D006636 2.7e-81 307.4 663 47.7
PGSC0003DMG400013918 Solanum tuberosum HOM05D005724 ORTHO05D006636 2.7e-81 307.4 589 47.9
Carub.0003s2445 Capsella rubella HOM05D005724 ORTHO05D006636 7.8e-81 305.8 655 42.7
Sed0018672 Sechium edule HOM05D005724 ORTHO05D006636 7.8e-81 305.8 679 40.1
TPR.G26364 Trifolium pratense HOM05D005724 ORTHO05D006636 1.0e-80 305.4 637 38.6
Aa31LG8G10800 Aethionema arabicum HOM05D005724 ORTHO05D006636 6.6e-80 302.8 591 45.0
Nitab4.5_0003319g0010 Nicotiana tabacum HOM05D005724 ORTHO05D006636 1.9e-79 301.2 659 44.2
Migut.C01153 Erythranthe guttata HOM05D005724 ORTHO05D006636 2.5e-79 300.8 685 37.2
Ah.06g195410 Amaranthus hybridus HOM05D005724 ORTHO05D006636 3.3e-79 300.4 670 43.3
Cfa006250 Carpinus fangiana HOM05D005724 ORTHO05D006636 3.3e-79 300.4 676 40.7
Sopen07g032510 Solanum pennellii HOM05D005724 ORTHO05D006636 3.3e-79 300.4 596 46.6
RcHm_v2.0_Chr3g0447651 Rosa chinensis HOM05D005724 ORTHO05D006636 1.6e-78 298.1 717 41.8
HanXRQChr16g0529541 Helianthus annuus HOM05D005724 ORTHO05D006636 2.8e-78 297.4 678 43.4
QL10p055704 Quercus lobata HOM05D005724 ORTHO05D006636 2.8e-78 297.4 671 51.0
Solyc07g064350.3 Solanum lycopersicum HOM05D005724 ORTHO05D006636 8.1e-78 295.8 596 46.8
THA.LOC104821618 Tarenaya hassleriana HOM05D005724 ORTHO05D006636 1.4e-77 295.0 605 44.0
arahy.Tifrunner.gnm1.ann1.GIZW0B Arachis hypogaea HOM05D005724 ORTHO05D006636 1.8e-77 294.7 695 42.2
CANSAT35G0128 Cannabis sativa HOM05D005724 ORTHO05D006636 2.3e-77 294.3 681 40.2
FvH4_6g00350 Fragaria vesca HOM05D005724 ORTHO05D006636 3.1e-77 293.9 683 43.0
QL10p055615 Quercus lobata HOM05D005724 ORTHO05D006636 3.1e-77 293.9 673 49.0
CsaV3_6G006850 Cucumis sativus L. HOM05D005724 ORTHO05D006636 4.0e-77 293.5 661 41.8
Thecc.05G190100 Theobroma cacao HOM05D005724 ORTHO05D006636 5.2e-77 293.1 690 39.6
Peaxi162Scf00691g00055 Petunia axillaris HOM05D005724 ORTHO05D006636 1.5e-76 291.6 713 37.7
arahy.Tifrunner.gnm1.ann1.EBNE7V Arachis hypogaea HOM05D005724 ORTHO05D006636 3.4e-76 290.4 696 39.2
MSTRG.1463 Avicennia marina HOM05D005724 ORTHO05D006636 1.3e-75 288.5 624 41.7
Cc10_g09550 Coffea canephora HOM05D005724 ORTHO05D006636 1.3e-75 288.5 699 36.2
Lsat_1_v5_gn_4_15540 Lactuca sativa HOM05D005724 ORTHO05D006636 2.2e-75 287.7 651 40.7
Os05g0490000 Oryza sativa ssp. japonica HOM05D005724 ORTHO05D006636 2.9e-75 287.3 367 49.9
Medtr2g030390 Medicago truncatula HOM05D005724 ORTHO05D006636 6.4e-75 286.2 635 38.3
ClCG09G009940 Citrullus lanatus HOM05D005724 ORTHO05D006636 1.9e-74 284.6 661 43.3
AL3G39270 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 4.6e-73 280.0 602 44.4
Haze_04583 Corylus avellana HOM05D005724 ORTHO05D006636 4.6e-73 280.0 682 41.9
QL03p046485 Quercus lobata HOM05D005724 ORTHO05D006636 6.0e-73 279.6 668 43.7
MELO3C000397.2 Cucumis melo HOM05D005724 ORTHO05D006636 1.0e-72 278.9 445 47.9
Potri.001G125200 Populus trichocarpa HOM05D005724 ORTHO05D006636 3.9e-72 276.9 666 35.6
AT3G24080 Arabidopsis thaliana HOM05D005724 ORTHO05D006636 8.6e-72 275.8 596 42.8
Gorai.004G263700 Gossypium raimondii HOM05D005724 ORTHO05D006636 1.9e-71 274.6 678 38.8
Lj2C388T1 Lonicera japonica HOM05D005724 ORTHO05D006636 3.6e-70 270.4 672 36.5
ECA234G3960 Erigeron canadensis HOM05D005724 ORTHO05D006636 1.1e-69 268.9 674 42.9
AL8G20560 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 2.3e-69 267.7 657 41.1
Sp3g21860 Schrenkiella parvula HOM05D005724 ORTHO05D006636 1.5e-68 265.0 431 48.0
Gohir.D08G247200 Gossypium hirsutum HOM05D005724 ORTHO05D006636 1.7e-67 261.5 682 37.1
MD12G1263700 Malus domestica HOM05D005724 ORTHO05D006636 1.4e-66 258.5 691 40.5
Gohir.A08G226800 Gossypium hirsutum HOM05D005724 ORTHO05D006636 2.7e-65 254.2 689 36.7
AUR62041171 Chenopodium quinoa HOM05D005724 ORTHO05D006636 3.5e-65 253.8 458 41.3
Duzib168G0454 Durio zibethinus HOM05D005724 ORTHO05D006636 3.5e-65 253.8 674 38.4
CARHR100150 Cardamine hirsuta HOM05D005724 ORTHO05D006636 1.3e-64 251.9 570 43.0
SEGI_23235 Sequoiadendron giganteum HOM05D005724 ORTHO05D006636 1.9e-63 248.1 714 40.6
Mapoly0029s0120 Marchantia polymorpha HOM05D005724 ORTHO05D006636 7.3e-63 246.1 695 34.2
BcaB06g26592 Brassica carinata HOM05D005724 ORTHO05D006636 2.1e-62 244.6 455 40.0
COL.COLO4_36609 Corchorus olitorius HOM05D005724 ORTHO05D006636 2.1e-62 244.6 676 32.0
AagrBONN_evm.TU.Sc2ySwM_228.2542 Anthoceros agrestis HOM05D005724 ORTHO05D006636 4.7e-62 243.4 688 35.0
CSS0001117 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 2.4e-61 241.1 337 47.5
BolC7t41765H Brassica oleracea HOM05D005724 ORTHO05D006636 5.2e-61 240.0 648 42.6
Mapoly0032s0003 Marchantia polymorpha HOM05D005724 ORTHO05D006636 8.9e-61 239.2 694 33.1
Oeu026139.1 Olea europaea HOM05D005724 ORTHO05D006636 1.5e-60 238.4 553 39.2
C07p12790 Brassica napus HOM05D005724 ORTHO05D006636 4.4e-60 236.9 457 42.5
Nitab4.5_0001290g0080 Nicotiana tabacum HOM05D005724 ORTHO05D006636 9.9e-60 235.7 658 38.1
vmacro22819 Vaccinium macrocarpon HOM05D005724 ORTHO05D006636 9.9e-60 235.7 660 37.4
A07p08250 Brassica napus HOM05D005724 ORTHO05D006636 1.3e-59 235.3 457 43.3
BcaC06g35627 Brassica carinata HOM05D005724 ORTHO05D006636 1.7e-59 235.0 458 42.1
AUR62029295 Chenopodium quinoa HOM05D005724 ORTHO05D006636 8.4e-59 232.6 447 40.7
BraA07t28608Z Brassica rapa HOM05D005724 ORTHO05D006636 1.2e-57 228.8 648 42.3
Zm00001eb227770 Zea mays HOM05D005724 ORTHO05D006636 1.1e-53 215.7 467 36.6
Pp3c2_10220 Physcomitrium patens HOM05D005724 ORTHO05D006636 2.4e-53 214.5 687 31.3
HPP92_010851 Vanilla planifolia HOM05D005724 ORTHO05D006636 7.6e-52 209.5 482 35.3
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 8.4e-51 206.1 458 38.6
SHI13708 Sapria himalayana HOM05D005724 ORTHO05D006636 5.6e-47 193.4 673 28.8
Nitab4.5_0013479g0020 Nicotiana tabacum HOM05D005724 ORTHO05D006636 7.3e-47 193.0 597 35.5
Glyma.13G144202 Glycine max HOM05D005724 ORTHO05D006636 2.1e-46 191.4 278 49.3
Dinv27343 Davidia involucrata HOM05D005724 ORTHO05D006636 3.7e-38 164.1 203 49.3
Nitab4.5_0005621g0050 Nicotiana tabacum HOM05D005724 ORTHO05D006636 2.6e-36 157.9 327 37.6
SMO118G0180 Selaginella moellendorffii HOM05D005724 ORTHO05D006636 2.1e-33 148.3 654 34.1
Cre10.g441450 Chlamydomonas reinhardtii HOM05D005724 ORTHO05D006636 3.0e-32 144.4 417 36.5
CBR_g46717 Chara braunii HOM05D005724 ORTHO05D006636 6.9e-29 133.3 465 33.3
PRCOL_00003643 Prasinoderma coloniale HOM05D005724 ORTHO05D006636 5.8e-28 130.2 389 30.6
MCO14G354 Micromonas commoda HOM05D005724 ORTHO05D006636 1.4e-26 125.6 595 36.5
PSO339G2657 Papaver somniferum HOM05D005724 ORTHO05D006636 9.3e-26 122.9 102 69.6
MD04G1246400 Malus domestica HOM05D005724 ORTHO05D006636 3.9e-24 117.5 114 57.0
Dinv27342 Davidia involucrata HOM05D005724 ORTHO05D006636 6.7e-24 116.7 307 33.6
Peaxi162Scf00916g00115 Petunia axillaris HOM05D005724 ORTHO05D006636 3.1e-21 107.8 358 34.4
AL8G20410 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 1.1e-18 99.4 95 57.9
Peaxi162Scf00916g00131 Petunia axillaris HOM05D005724 ORTHO05D006636 5.5e-18 97.1 160 43.1
Psat1g166960 Pisum sativum HOM05D005724 ORTHO05D006636 1.7e-14 85.5 219 33.3
MELO3C003738.2 Cucumis melo HOM05D005724 ORTHO05D006636 2.1e-09 68.6 103 42.7
MELO3C017820.2 Cucumis melo HOM05D005724 ORTHO05D006636 3.6e-09 67.8 103 41.7
Nitab4.5_0005621g0090 Nicotiana tabacum HOM05D005724 ORTHO05D006636 2.6e-07 61.6 101 38.6
AagrBONN_evm.TU.Sc2ySwM_344.5238 Anthoceros agrestis HOM05D005724 ORTHO05D006636 3.3e-07 61.2 361 29.4
Cfa025790 Carpinus fangiana HOM05D005724 ORTHO05D006636 2.2e-06 58.5 384 28.4
MD04G1246500 Malus domestica HOM05D005724 ORTHO05D006636 6.3e-06 57.0 131 37.4
Cpa.g.sc48.98 Carica papaya HOM05D005724 ORTHO05D006636 8.2e-06 56.6 108 36.1


User provided reference genes

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