Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G5850 Papaver somniferum HOM05D006531 ORTHO05D007905 0.0e+00 1183.3 582 100.0
PSO675G3692 Papaver somniferum HOM05D006531 ORTHO05D007905 0.0e+00 1104.4 586 93.5
TAR628G0973 Trochodendron aralioides HOM05D006531 ORTHO05D007905 9.4e-171 604.4 596 55.0
Aqoxy6G01185 Aquilegia oxysepala HOM05D006531 ORTHO05D007905 5.4e-158 562.0 612 49.7
Dinv05610 Davidia involucrata HOM05D006531 ORTHO05D007905 1.2e-149 534.3 567 51.5
GSVIVG01018883001 Vitis vinifera HOM05D006531 ORTHO05D007905 1.6e-146 523.9 578 49.5
Actinidia35619 Actinidia chinensis HOM05D006531 ORTHO05D007905 6.6e-140 501.9 592 47.1
CsaV3_6G046680 Cucumis sativus L. HOM05D006531 ORTHO05D007905 4.3e-139 499.2 584 46.7
Haze_03846 Corylus avellana HOM05D006531 ORTHO05D007905 1.2e-138 497.7 590 46.8
MD15G1254500 Malus domestica HOM05D006531 ORTHO05D007905 1.6e-138 497.3 582 47.3
Thecc.01G028000 Theobroma cacao HOM05D006531 ORTHO05D007905 1.4e-137 494.2 586 47.4
MELO3C007866.2 Cucumis melo HOM05D006531 ORTHO05D007905 9.9e-136 488.0 584 45.5
Duzib187G1823 Durio zibethinus HOM05D006531 ORTHO05D007905 2.9e-135 486.5 585 45.6
FAN19G3073 Fragaria x ananassa HOM05D006531 ORTHO05D007905 3.7e-135 486.1 597 47.1
Gohir.D11G188400 Gossypium hirsutum HOM05D006531 ORTHO05D007905 4.9e-135 485.7 583 44.9
COL.COLO4_22012 Corchorus olitorius HOM05D006531 ORTHO05D007905 2.4e-134 483.4 586 48.0
QL06p035210 Quercus lobata HOM05D006531 ORTHO05D007905 5.4e-134 482.3 611 44.4
Gorai.007G200500 Gossypium raimondii HOM05D006531 ORTHO05D007905 7.1e-134 481.9 583 44.8
vmacro17801 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 1.6e-133 480.7 596 45.5
CANSAT21G1927 Cannabis sativa HOM05D006531 ORTHO05D007905 2.7e-133 479.9 583 45.5
FvH4_1g12740 Fragaria vesca HOM05D006531 ORTHO05D007905 4.6e-133 479.2 601 46.6
Potri.007G019733 Populus trichocarpa HOM05D006531 ORTHO05D007905 4.6e-133 479.2 589 47.5
RcHm_v2.0_Chr2g0100811 Rosa chinensis HOM05D006531 ORTHO05D007905 1.3e-132 477.6 574 47.6
Potri.007G019800 Populus trichocarpa HOM05D006531 ORTHO05D007905 2.3e-132 476.9 590 47.1
FAN23G2909 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.5e-131 474.2 593 46.7
Atru.chr3.665 Acer truncatum HOM05D006531 ORTHO05D007905 2.5e-131 473.4 597 46.4
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 3.3e-131 473.0 613 43.7
Ciclev10025250m.g Citrus clementina HOM05D006531 ORTHO05D007905 8.1e-130 468.4 601 45.9
FAN26G0669 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.8e-129 467.2 585 46.3
Rhsim08G0121800 Rhododendron simsii HOM05D006531 ORTHO05D007905 3.1e-129 466.5 573 46.1
FAN28G0612 Fragaria x ananassa HOM05D006531 ORTHO05D007905 2.0e-128 463.8 590 45.3
TWI53G1729 Tripterygium wilfordii HOM05D006531 ORTHO05D007905 2.2e-127 460.3 586 46.2
EL10As8g23896 Beta vulgaris HOM05D006531 ORTHO05D007905 5.4e-126 455.7 584 44.3
Sc07g0000880 Simmondsia chinensis HOM05D006531 ORTHO05D007905 5.4e-126 455.7 579 44.4
Lalb_Chr16g0391021 Lupinus albus HOM05D006531 ORTHO05D007905 7.8e-125 451.8 592 43.2
AUR62004101 Chenopodium quinoa HOM05D006531 ORTHO05D007905 3.9e-124 449.5 592 43.9
CDE04G2389 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 1.1e-123 448.0 592 42.4
AUR62007614 Chenopodium quinoa HOM05D006531 ORTHO05D007905 7.3e-123 445.3 611 42.6
Ah.03g141200 Amaranthus hybridus HOM05D006531 ORTHO05D007905 2.1e-122 443.7 589 43.0
Oeu056763.1 Olea europaea HOM05D006531 ORTHO05D007905 2.8e-122 443.4 591 44.3
Cc07_g10020 Coffea canephora HOM05D006531 ORTHO05D007905 3.6e-122 443.0 595 44.5
Lsat_1_v5_gn_4_151921 Lactuca sativa HOM05D006531 ORTHO05D007905 3.6e-122 443.0 579 43.7
Hund14004 Selenicereus undatus HOM05D006531 ORTHO05D007905 4.7e-122 442.6 595 42.5
PGR102G2490 Punica granatum HOM05D006531 ORTHO05D007905 8.1e-122 441.8 583 42.7
MSTRG.23258 Avicennia marina HOM05D006531 ORTHO05D007905 1.2e-120 438.0 583 43.1
Cpa.g.sc89.75 Carica papaya HOM05D006531 ORTHO05D007905 5.8e-120 435.6 592 40.7
Gohir.D11G322533 Gossypium hirsutum HOM05D006531 ORTHO05D007905 9.9e-120 434.9 586 42.5
DCAR_001553 Daucus carota HOM05D006531 ORTHO05D007905 8.4e-119 431.8 590 43.1
Prupe.7G159100 Prunus persica HOM05D006531 ORTHO05D007905 1.4e-118 431.0 538 45.7
SalBow8G4669 Salvia bowleyana HOM05D006531 ORTHO05D007905 1.2e-117 427.9 584 43.2
Atru.BG.101.p Acer truncatum HOM05D006531 ORTHO05D007905 1.5e-115 421.0 579 42.8
Sabra07G0016900 Salix brachista HOM05D006531 ORTHO05D007905 2.5e-115 420.2 533 46.0
PGSC0003DMG400022568 Solanum tuberosum HOM05D006531 ORTHO05D007905 2.5e-115 420.2 584 42.8
Migut.H02514 Erythranthe guttata HOM05D006531 ORTHO05D007905 2.4e-113 413.7 577 40.6
Medtr8g076860 Medicago truncatula HOM05D006531 ORTHO05D007905 5.3e-113 412.5 583 41.5
Sopen03g006510 Solanum pennellii HOM05D006531 ORTHO05D007905 1.5e-112 411.0 580 41.7
THA.LOC104819768 Tarenaya hassleriana HOM05D006531 ORTHO05D007905 5.8e-112 409.1 594 41.6
VMungo0251G0240 Vigna mungo HOM05D006531 ORTHO05D007905 5.8e-112 409.1 600 38.7
Glyma.02G053000 Glycine max HOM05D006531 ORTHO05D007905 7.6e-112 408.7 597 41.2
CAN.G753.1 Capsicum annuum HOM05D006531 ORTHO05D007905 2.2e-111 407.1 590 41.2
arahy.Tifrunner.gnm1.ann1.P54VLQ Arachis hypogaea HOM05D006531 ORTHO05D007905 2.9e-111 406.8 581 41.7
arahy.Tifrunner.gnm1.ann1.WDDE23 Arachis hypogaea HOM05D006531 ORTHO05D007905 2.9e-111 406.8 581 42.0
Psat4g096120 Pisum sativum HOM05D006531 ORTHO05D007905 4.9e-111 406.0 586 41.0
TPR.G21544 Trifolium pratense HOM05D006531 ORTHO05D007905 1.4e-110 404.4 580 41.4
Solyc03g033720.4 Solanum lycopersicum HOM05D006531 ORTHO05D007905 1.2e-109 401.4 586 41.8
ATR0585G072 Amborella trichopoda HOM05D006531 ORTHO05D007905 2.1e-109 400.6 596 37.4
Ca_22340_v3 Cicer arietinum L. HOM05D006531 ORTHO05D007905 7.9e-109 398.7 581 41.0
Eucgr.J02379 Eucalyptus grandis HOM05D006531 ORTHO05D007905 7.9e-109 398.7 581 39.9
Nitab4.5_0011360g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 3.9e-108 396.4 586 41.1
ECA232G0312 Erigeron canadensis HOM05D006531 ORTHO05D007905 6.7e-108 395.6 581 39.6
Thhalv10003992m.g Eutrema salsugineum HOM05D006531 ORTHO05D007905 3.3e-107 393.3 581 40.6
Os02g0130900 Oryza sativa ssp. japonica HOM05D006531 ORTHO05D007905 6.9e-105 385.6 602 40.7
Sp2g15880 Schrenkiella parvula HOM05D006531 ORTHO05D007905 6.9e-105 385.6 584 40.4
AL5G15610 Arabidopsis lyrata HOM05D006531 ORTHO05D007905 1.5e-104 384.4 585 43.1
Lj4g0004916 Lotus japonicus HOM05D006531 ORTHO05D007905 2.0e-104 384.0 590 39.2
AT3G26750 Arabidopsis thaliana HOM05D006531 ORTHO05D007905 3.4e-104 383.3 580 42.1
HanXRQChr09g0261281 Helianthus annuus HOM05D006531 ORTHO05D007905 2.2e-103 380.6 577 40.0
Nitab4.5_0001289g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 1.9e-102 377.5 613 37.8
CARHR147820 Cardamine hirsuta HOM05D006531 ORTHO05D007905 1.2e-101 374.8 586 40.4
BcaC06g33892 Brassica carinata HOM05D006531 ORTHO05D007905 1.0e-100 371.7 590 39.2
A06p41760 Brassica napus HOM05D006531 ORTHO05D007905 3.7e-98 363.2 578 39.8
BraA06t27096Z Brassica rapa HOM05D006531 ORTHO05D007905 3.7e-98 363.2 578 39.8
Aa31LG2G5790 Aethionema arabicum HOM05D006531 ORTHO05D007905 4.8e-98 362.8 567 40.4
HPP92_011628 Vanilla planifolia HOM05D006531 ORTHO05D007905 2.4e-97 360.5 548 39.1
C07p35780 Brassica napus HOM05D006531 ORTHO05D007905 6.9e-97 359.0 591 38.6
MBI16_g36847_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 9.0e-97 358.6 449 45.2
BcaC06g31044 Brassica carinata HOM05D006531 ORTHO05D007905 1.5e-96 357.8 591 38.7
BolC7t44097H Brassica oleracea HOM05D006531 ORTHO05D007905 6.5e-95 352.4 583 38.3
Lj2C458T7 Lonicera japonica HOM05D006531 ORTHO05D007905 2.1e-93 347.4 465 43.4
CiPaw.07G051400 Carya illinoinensis HOM05D006531 ORTHO05D007905 4.1e-89 333.2 442 44.3
unitig_0.g471 Utricularia gibba HOM05D006531 ORTHO05D007905 5.3e-89 332.8 580 36.9
Sed0004808 Sechium edule HOM05D006531 ORTHO05D007905 9.3e-86 322.0 424 43.2
Peaxi162Scf00010g00816 Petunia axillaris HOM05D006531 ORTHO05D007905 1.0e-84 318.5 569 37.8
Gohir.A11G181766 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.3e-82 311.6 417 42.4
Manes.02G098000 Manihot esculenta HOM05D006531 ORTHO05D007905 8.2e-82 308.9 430 41.6
Carub.0005s0479 Capsella rubella HOM05D006531 ORTHO05D007905 1.7e-74 284.6 444 39.9
Hma1.2p1_3019F.1_g331750 Hydrangea macrophylla HOM05D006531 ORTHO05D007905 4.1e-73 280.0 375 44.8
SGA_v2.0_scaffold12G06335 Striga asiatica HOM05D006531 ORTHO05D007905 1.4e-70 271.6 418 40.4
MBI14_g29302_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 1.1e-62 245.4 190 60.0
Mapoly0011s0081 Marchantia polymorpha HOM05D006531 ORTHO05D007905 1.4e-60 238.4 646 27.9
Nn5g29702 Nelumbo nucifera HOM05D006531 ORTHO05D007905 3.7e-58 230.3 582 28.9
Pp3c2_6980 Physcomitrium patens HOM05D006531 ORTHO05D007905 7.7e-56 222.6 610 28.9
Phvul.003G257232 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 1.1e-54 218.8 223 48.9
Zm00001eb209020 Zea mays HOM05D006531 ORTHO05D007905 4.2e-54 216.9 521 31.1
Phvul.003G257166 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 7.2e-54 216.1 255 43.9
TAR376G0004 Trochodendron aralioides HOM05D006531 ORTHO05D007905 5.7e-43 179.9 141 63.8
CSS0007477 Camellia sinensis var. sinensis HOM05D006531 ORTHO05D007905 1.0e-39 169.1 135 60.0
AagrBONN_evm.TU.Sc2ySwM_368.1148 Anthoceros agrestis HOM05D006531 ORTHO05D007905 2.2e-34 151.4 475 26.1
Zm00001eb231290 Zea mays HOM05D006531 ORTHO05D007905 2.4e-33 147.9 190 43.7
vmacro23089 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 5.4e-33 146.7 125 56.8
TAR376G0395 Trochodendron aralioides HOM05D006531 ORTHO05D007905 1.7e-31 141.7 138 52.2
SEGI_05601 Sequoiadendron giganteum HOM05D006531 ORTHO05D007905 5.4e-25 120.2 339 27.4
Lj2g0008134 Lotus japonicus HOM05D006531 ORTHO05D007905 5.1e-23 113.6 162 38.9
Carub.0006s2991 Capsella rubella HOM05D006531 ORTHO05D007905 8.1e-21 106.3 123 44.7
Sc07g0000850 Simmondsia chinensis HOM05D006531 ORTHO05D007905 1.5e-11 75.5 74 45.9
CDE06G1394 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 2.2e-10 71.6 73 47.9
CBR_g8866 Chara braunii HOM05D006531 ORTHO05D007905 1.4e-09 68.9 102 29.4
TAR629G1149 Trochodendron aralioides HOM05D006531 ORTHO05D007905 9.2e-09 66.2 78 43.6
RcHm_v2.0_Chr4g0390451 Rosa chinensis HOM05D006531 ORTHO05D007905 1.7e-07 62.0 43 69.8


User provided reference genes

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