Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G5790 Papaver somniferum HOM05D006906 ORTHO05D008578 1.5e-62 242.7 121 100.0
PSO675G4379 Papaver somniferum HOM05D006906 ORTHO05D008578 1.4e-60 236.1 121 95.9
Prupe.1G543500 Prunus persica HOM05D006906 ORTHO05D008578 1.0e-18 97.1 98 55.1
C03p09940 Brassica napus HOM05D006906 ORTHO05D008578 1.3e-18 96.7 92 54.3
TWI56G0746 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 1.3e-18 96.7 100 53.0
AUR62035774 Chenopodium quinoa HOM05D006906 ORTHO05D008578 1.7e-18 96.3 115 47.0
Sp6g26380 Schrenkiella parvula HOM05D006906 ORTHO05D008578 2.3e-18 95.9 91 54.9
Dinv01221 Davidia involucrata HOM05D006906 ORTHO05D008578 6.6e-18 94.4 112 49.1
Hma1.2p1_1068F.1_g254010 Hydrangea macrophylla HOM05D006906 ORTHO05D008578 1.5e-17 93.2 111 48.6
HanXRQChr16g0510751 Helianthus annuus HOM05D006906 ORTHO05D008578 1.9e-17 92.8 100 49.0
HanXRQChr16g0510761 Helianthus annuus HOM05D006906 ORTHO05D008578 1.9e-17 92.8 100 49.0
Aqoxy6G01513 Aquilegia oxysepala HOM05D006906 ORTHO05D008578 2.5e-17 92.4 105 52.4
BraA02t05416Z Brassica rapa HOM05D006906 ORTHO05D008578 2.5e-17 92.4 117 49.6
CSS0004987 Camellia sinensis var. sinensis HOM05D006906 ORTHO05D008578 2.5e-17 92.4 95 52.6
BcaB01g05160 Brassica carinata HOM05D006906 ORTHO05D008578 3.3e-17 92.0 92 51.1
BolC3t13482H Brassica oleracea HOM05D006906 ORTHO05D008578 3.3e-17 92.0 92 51.1
BraA03t10177Z Brassica rapa HOM05D006906 ORTHO05D008578 3.3e-17 92.0 92 51.1
AL6G28970 Arabidopsis lyrata HOM05D006906 ORTHO05D008578 4.3e-17 91.7 111 48.6
BcaB01g04920 Brassica carinata HOM05D006906 ORTHO05D008578 4.3e-17 91.7 96 52.1
BcaB08g36735 Brassica carinata HOM05D006906 ORTHO05D008578 4.3e-17 91.7 92 54.3
BcaC04g18752 Brassica carinata HOM05D006906 ORTHO05D008578 5.6e-17 91.3 92 54.3
C09p59250 Brassica napus HOM05D006906 ORTHO05D008578 5.6e-17 91.3 92 54.3
BolC9t58765H Brassica oleracea HOM05D006906 ORTHO05D008578 5.6e-17 91.3 92 54.3
Potri.002G112500 Populus trichocarpa HOM05D006906 ORTHO05D008578 5.6e-17 91.3 51 80.4
EL10Ac1g02326 Beta vulgaris HOM05D006906 ORTHO05D008578 7.3e-17 90.9 107 49.5
A10p21600 Brassica napus HOM05D006906 ORTHO05D008578 7.3e-17 90.9 107 47.7
BolC2t06848H Brassica oleracea HOM05D006906 ORTHO05D008578 7.3e-17 90.9 113 47.8
TAR628G1359 Trochodendron aralioides HOM05D006906 ORTHO05D008578 7.3e-17 90.9 61 73.8
Ah.05g166860 Amaranthus hybridus HOM05D006906 ORTHO05D008578 9.5e-17 90.5 85 55.3
BcaC03g13555 Brassica carinata HOM05D006906 ORTHO05D008578 1.2e-16 90.1 92 54.3
BraA10t44222Z Brassica rapa HOM05D006906 ORTHO05D008578 1.2e-16 90.1 107 48.6
AUR62034964 Chenopodium quinoa HOM05D006906 ORTHO05D008578 1.2e-16 90.1 102 47.1
Sabra02G0088700 Salix brachista HOM05D006906 ORTHO05D008578 1.2e-16 90.1 51 78.4
MELO3C003483.2 Cucumis melo HOM05D006906 ORTHO05D008578 1.6e-16 89.7 50 80.0
MD08G1211600 Malus domestica HOM05D006906 ORTHO05D008578 2.1e-16 89.4 69 60.9
AT5G17870 Arabidopsis thaliana HOM05D006906 ORTHO05D008578 2.8e-16 89.0 92 53.3
ClCG11G014950 Citrullus lanatus HOM05D006906 ORTHO05D008578 2.8e-16 89.0 51 76.5
Manes.18G052450 Manihot esculenta HOM05D006906 ORTHO05D008578 2.8e-16 89.0 61 67.2
A02p04550 Brassica napus HOM05D006906 ORTHO05D008578 3.6e-16 88.6 114 48.2
DCAR_012832 Daucus carota HOM05D006906 ORTHO05D008578 3.6e-16 88.6 107 47.7
Sed0015154 Sechium edule HOM05D006906 ORTHO05D008578 3.6e-16 88.6 72 59.7
TWI12G0785 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 3.6e-16 88.6 116 45.7
ECA246G4410 Erigeron canadensis HOM05D006906 ORTHO05D008578 4.7e-16 88.2 50 76.0
Lsat_1_v5_gn_6_108161 Lactuca sativa HOM05D006906 ORTHO05D008578 4.7e-16 88.2 95 49.5
Carub.0006s1610 Capsella rubella HOM05D006906 ORTHO05D008578 6.2e-16 87.8 111 46.8
PGR031G1810 Punica granatum HOM05D006906 ORTHO05D008578 6.2e-16 87.8 51 74.5
Sc26g0004280 Simmondsia chinensis HOM05D006906 ORTHO05D008578 6.2e-16 87.8 99 49.5
PGSC0003DMG400004936 Solanum tuberosum HOM05D006906 ORTHO05D008578 6.2e-16 87.8 95 51.6
Thhalv10015071m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 8.1e-16 87.4 91 53.8
MBI16_g41120_MAGBIO Magnolia biondii HOM05D006906 ORTHO05D008578 8.1e-16 87.4 81 56.8
QL12p040639 Quercus lobata HOM05D006906 ORTHO05D008578 8.1e-16 87.4 51 76.5
MD15G1394500 Malus domestica HOM05D006906 ORTHO05D008578 1.1e-15 87.0 52 73.1
Nitab4.5_0002415g0040 Nicotiana tabacum HOM05D006906 ORTHO05D008578 1.4e-15 86.7 97 46.4
Prupe.3G080900 Prunus persica HOM05D006906 ORTHO05D008578 1.8e-15 86.3 52 76.9
ATR0767G231 Amborella trichopoda HOM05D006906 ORTHO05D008578 2.3e-15 85.9 54 66.7
MSTRG.17420 Avicennia marina HOM05D006906 ORTHO05D008578 3.1e-15 85.5 95 49.5
CDE01G0046 Ceratophyllum demersum HOM05D006906 ORTHO05D008578 3.1e-15 85.5 62 67.7
Rhsim07G0215600 Rhododendron simsii HOM05D006906 ORTHO05D008578 3.1e-15 85.5 100 43.0
Solyc04g077130.1 Solanum lycopersicum HOM05D006906 ORTHO05D008578 3.1e-15 85.5 97 45.4
Duzib116G0588 Durio zibethinus HOM05D006906 ORTHO05D008578 4.0e-15 85.1 68 58.8
vmacro04612 Vaccinium macrocarpon HOM05D006906 ORTHO05D008578 4.0e-15 85.1 73 54.8
Actinidia19594 Actinidia chinensis HOM05D006906 ORTHO05D008578 5.2e-15 84.7 102 42.2
CARHR195300 Cardamine hirsuta HOM05D006906 ORTHO05D008578 5.2e-15 84.7 46 80.4
Cpa.g.sc160.12 Carica papaya HOM05D006906 ORTHO05D008578 5.2e-15 84.7 57 63.2
Duzib116G0218 Durio zibethinus HOM05D006906 ORTHO05D008578 5.2e-15 84.7 68 58.8
Eucgr.F00111 Eucalyptus grandis HOM05D006906 ORTHO05D008578 5.2e-15 84.7 54 66.7
Atru.chr13.910 Acer truncatum HOM05D006906 ORTHO05D008578 6.8e-15 84.3 65 63.1
CANSAT01G2303 Cannabis sativa HOM05D006906 ORTHO05D008578 6.8e-15 84.3 118 44.9
Os11g0550800 Oryza sativa ssp. japonica HOM05D006906 ORTHO05D008578 1.5e-14 83.2 70 62.9
Peaxi162Scf00628g00053 Petunia axillaris HOM05D006906 ORTHO05D008578 1.5e-14 83.2 50 68.0
CAN.G416.50 Capsicum annuum HOM05D006906 ORTHO05D008578 2.0e-14 82.8 113 39.8
Ciclev10002778m.g Citrus clementina HOM05D006906 ORTHO05D008578 2.0e-14 82.8 71 59.2
Duzib093G2206 Durio zibethinus HOM05D006906 ORTHO05D008578 2.0e-14 82.8 65 56.9
RcHm_v2.0_Chr7g0232161 Rosa chinensis HOM05D006906 ORTHO05D008578 2.0e-14 82.8 101 43.6
Thecc.08G080900 Theobroma cacao HOM05D006906 ORTHO05D008578 2.0e-14 82.8 52 71.2
Haze_19024 Corylus avellana HOM05D006906 ORTHO05D008578 2.6e-14 82.4 52 69.2
FAN08G0950 Fragaria x ananassa HOM05D006906 ORTHO05D008578 2.6e-14 82.4 101 44.6
Gohir.A05G213900 Gossypium hirsutum HOM05D006906 ORTHO05D008578 3.4e-14 82.0 64 62.5
Gorai.009G224100 Gossypium raimondii HOM05D006906 ORTHO05D008578 3.4e-14 82.0 64 62.5
Cfa020715 Carpinus fangiana HOM05D006906 ORTHO05D008578 4.4e-14 81.6 72 54.2
FvH4_5g33440 Fragaria vesca HOM05D006906 ORTHO05D008578 4.4e-14 81.6 101 43.6
FAN18G0347 Fragaria x ananassa HOM05D006906 ORTHO05D008578 4.4e-14 81.6 101 43.6
COL.COLO4_35364 Corchorus olitorius HOM05D006906 ORTHO05D008578 5.8e-14 81.3 52 69.2
Nitab4.5_0001614g0100 Nicotiana tabacum HOM05D006906 ORTHO05D008578 5.8e-14 81.3 49 67.3
Phvul.009G113500 Phaseolus vulgaris HOM05D006906 ORTHO05D008578 5.8e-14 81.3 112 45.5
Sopen04g030750 Solanum pennellii HOM05D006906 ORTHO05D008578 7.5e-14 80.9 97 43.3
Aa31LG11G11710 Aethionema arabicum HOM05D006906 ORTHO05D008578 9.8e-14 80.5 69 58.0
Gohir.D05G217300 Gossypium hirsutum HOM05D006906 ORTHO05D008578 1.3e-13 80.1 64 60.9
THA.LOC104806946 Tarenaya hassleriana HOM05D006906 ORTHO05D008578 1.7e-13 79.7 49 71.4
CiPaw.15G153800 Carya illinoinensis HOM05D006906 ORTHO05D008578 4.9e-13 78.2 48 72.9
SGA_v2.0_scaffold152G36871 Striga asiatica HOM05D006906 ORTHO05D008578 6.4e-13 77.8 57 64.9
Glyma.06G089700 Glycine max HOM05D006906 ORTHO05D008578 8.3e-13 77.4 59 64.4
SalBow2G0068 Salvia bowleyana HOM05D006906 ORTHO05D008578 8.3e-13 77.4 52 65.4
HPP92_027715 Vanilla planifolia HOM05D006906 ORTHO05D008578 4.1e-12 75.1 63 61.9
BcaC04g18751 Brassica carinata HOM05D006906 ORTHO05D008578 5.4e-12 74.7 115 43.5
C09p59230 Brassica napus HOM05D006906 ORTHO05D008578 5.4e-12 74.7 115 43.5
HPP92_027718 Vanilla planifolia HOM05D006906 ORTHO05D008578 5.4e-12 74.7 63 61.9
unitig_21.g20623 Utricularia gibba HOM05D006906 ORTHO05D008578 9.2e-12 73.9 99 44.4
Thhalv10009816m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 1.0e-10 70.5 53 67.9
BolC9t58763H Brassica oleracea HOM05D006906 ORTHO05D008578 1.3e-10 70.1 92 47.8
TPR.G12407 Trifolium pratense HOM05D006906 ORTHO05D008578 2.3e-10 69.3 57 59.6
Prupe.8G111300 Prunus persica HOM05D006906 ORTHO05D008578 3.0e-10 68.9 62 58.1
Psat1g221800 Pisum sativum HOM05D006906 ORTHO05D008578 3.9e-10 68.6 56 60.7
Medtr3g110640 Medicago truncatula HOM05D006906 ORTHO05D008578 4.3e-09 65.1 59 57.6
Migut.N02816 Erythranthe guttata HOM05D006906 ORTHO05D008578 2.1e-08 62.8 90 48.9
Mapoly0090s0093 Marchantia polymorpha HOM05D006906 ORTHO05D008578 1.1e-07 60.5 55 54.5
Manes.05G185700 Manihot esculenta HOM05D006906 ORTHO05D008578 4.0e-07 58.5 64 45.3
SEGI_12109 Sequoiadendron giganteum HOM05D006906 ORTHO05D008578 5.2e-07 58.2 37 75.7
CBR_g48804 Chara braunii HOM05D006906 ORTHO05D008578 1.5e-06 56.6 42 59.5
SMO367G0828 Selaginella moellendorffii HOM05D006906 ORTHO05D008578 1.5e-06 56.6 49 57.1
Nn5g30714 Nelumbo nucifera HOM05D006906 ORTHO05D008578 2.6e-06 55.8 48 54.2
Pp3c3_11690 Physcomitrium patens HOM05D006906 ORTHO05D008578 2.6e-06 55.8 76 44.7


User provided reference genes

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