Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G5712 Papaver somniferum HOM05D003374 ORTHO05D009415 9.2e-71 270.0 127 100.0
PSO675G5709 Papaver somniferum HOM05D003374 ORTHO05D009415 5.0e-69 264.2 127 97.6
Aqoxy6G01987 Aquilegia oxysepala HOM05D003374 ORTHO05D009415 4.4e-57 224.6 127 79.5
CiPaw.13G118300 Carya illinoinensis HOM05D003374 ORTHO05D009415 5.8e-57 224.2 127 79.5
Thecc.01G011400 Theobroma cacao HOM05D003374 ORTHO05D009415 4.9e-56 221.1 127 78.0
Duzib147G1310 Durio zibethinus HOM05D003374 ORTHO05D009415 1.4e-55 219.5 127 78.7
Nn6g31909 Nelumbo nucifera HOM05D003374 ORTHO05D009415 3.2e-55 218.4 126 78.6
Duzib147G0846 Durio zibethinus HOM05D003374 ORTHO05D009415 5.4e-55 217.6 127 78.0
CiPaw.08G125700 Carya illinoinensis HOM05D003374 ORTHO05D009415 7.1e-55 217.2 127 77.2
CsaV3_3G000500 Cucumis sativus L. HOM05D003374 ORTHO05D009415 2.7e-54 215.3 127 74.0
Medtr5g022990 Medicago truncatula HOM05D003374 ORTHO05D009415 1.3e-53 213.0 127 71.7
TAR376G1073 Trochodendron aralioides HOM05D003374 ORTHO05D009415 1.3e-53 213.0 127 75.6
Lalb_Chr05g0212171 Lupinus albus HOM05D003374 ORTHO05D009415 1.7e-53 212.6 124 75.8
Manes.01G150900 Manihot esculenta HOM05D003374 ORTHO05D009415 2.3e-53 212.2 127 74.8
COL.COLO4_22496 Corchorus olitorius HOM05D003374 ORTHO05D009415 3.9e-53 211.5 127 74.8
Glyma.11G081000 Glycine max HOM05D003374 ORTHO05D009415 3.9e-53 211.5 124 75.8
TAR625G1333 Trochodendron aralioides HOM05D003374 ORTHO05D009415 5.1e-53 211.1 122 78.7
SGA_v2.0_scaffold16G07586 Striga asiatica HOM05D003374 ORTHO05D009415 6.6e-53 210.7 127 73.2
Haze_03703 Corylus avellana HOM05D003374 ORTHO05D009415 8.7e-53 210.3 126 74.6
Rhsim10G0205600 Rhododendron simsii HOM05D003374 ORTHO05D009415 1.1e-52 209.9 127 74.0
Oeu022072.1 Olea europaea HOM05D003374 ORTHO05D009415 1.5e-52 209.5 127 71.7
Sc16g0001810 Simmondsia chinensis HOM05D003374 ORTHO05D009415 1.9e-52 209.1 127 73.2
CAN.G890.27 Capsicum annuum HOM05D003374 ORTHO05D009415 3.3e-52 208.4 127 75.6
Oeu050858.1 Olea europaea HOM05D003374 ORTHO05D009415 4.3e-52 208.0 127 70.9
Ah.03g134290 Amaranthus hybridus HOM05D003374 ORTHO05D009415 5.6e-52 207.6 127 71.7
Sopen02g028140 Solanum pennellii HOM05D003374 ORTHO05D009415 5.6e-52 207.6 127 74.8
Ca_24943_v3 Cicer arietinum L. HOM05D003374 ORTHO05D009415 7.3e-52 207.2 124 72.6
Gohir.A02G174400 Gossypium hirsutum HOM05D003374 ORTHO05D009415 1.2e-51 206.5 127 73.2
Cfa007030 Carpinus fangiana HOM05D003374 ORTHO05D009415 1.6e-51 206.1 123 74.8
Cc07_g11320 Coffea canephora HOM05D003374 ORTHO05D009415 1.6e-51 206.1 127 72.4
Cc08_g04870 Coffea canephora HOM05D003374 ORTHO05D009415 1.6e-51 206.1 127 72.4
QL06p052083 Quercus lobata HOM05D003374 ORTHO05D009415 1.6e-51 206.1 124 74.2
Solyc02g083360.1 Solanum lycopersicum HOM05D003374 ORTHO05D009415 1.6e-51 206.1 127 74.0
Ciclev10026501m.g Citrus clementina HOM05D003374 ORTHO05D009415 2.1e-51 205.7 127 71.7
PGSC0003DMG400003664 Solanum tuberosum HOM05D003374 ORTHO05D009415 2.1e-51 205.7 127 74.0
CSS0011665 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 2.8e-51 205.3 127 71.7
Gorai.003G005800 Gossypium raimondii HOM05D003374 ORTHO05D009415 3.6e-51 204.9 127 71.7
Sabra05G0088200 Salix brachista HOM05D003374 ORTHO05D009415 4.7e-51 204.5 127 70.9
TPR.G25106 Trifolium pratense HOM05D003374 ORTHO05D009415 4.7e-51 204.5 124 70.2
Lsat_1_v5_gn_2_75400 Lactuca sativa HOM05D003374 ORTHO05D009415 8.1e-51 203.8 127 70.9
SalBow7G1184 Salvia bowleyana HOM05D003374 ORTHO05D009415 1.1e-50 203.4 127 70.9
Atru.chr3.908 Acer truncatum HOM05D003374 ORTHO05D009415 1.8e-50 202.6 127 69.3
Cpa.g.sc6.314 Carica papaya HOM05D003374 ORTHO05D009415 2.4e-50 202.2 126 72.2
Potri.005G107700 Populus trichocarpa HOM05D003374 ORTHO05D009415 2.4e-50 202.2 127 70.9
DCAR_014045 Daucus carota HOM05D003374 ORTHO05D009415 3.1e-50 201.8 126 69.8
Gohir.D03G005400 Gossypium hirsutum HOM05D003374 ORTHO05D009415 4.0e-50 201.4 127 70.1
GSVIVG01005194001 Vitis vinifera HOM05D003374 ORTHO05D009415 4.0e-50 201.4 123 72.4
TWI73G0214 Tripterygium wilfordii HOM05D003374 ORTHO05D009415 5.2e-50 201.1 125 70.4
CSS0020449 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 9.0e-50 200.3 127 70.1
Lj2g0014685 Lotus japonicus HOM05D003374 ORTHO05D009415 2.6e-49 198.7 125 69.6
Eucgr.J02491 Eucalyptus grandis HOM05D003374 ORTHO05D009415 4.4e-49 198.0 127 68.5
THA.LOC104807515 Tarenaya hassleriana HOM05D003374 ORTHO05D009415 4.4e-49 198.0 126 69.8
CANSAT25G2243 Cannabis sativa HOM05D003374 ORTHO05D009415 5.8e-49 197.6 127 67.7
Psat2g152000 Pisum sativum HOM05D003374 ORTHO05D009415 1.3e-48 196.4 124 66.1
AL3G50700 Arabidopsis lyrata HOM05D003374 ORTHO05D009415 1.7e-48 196.1 125 67.2
Phvul.002G104600 Phaseolus vulgaris HOM05D003374 ORTHO05D009415 2.2e-48 195.7 124 71.0
Dinv40145 Davidia involucrata HOM05D003374 ORTHO05D009415 2.9e-48 195.3 113 75.2
AT2G17705 Arabidopsis thaliana HOM05D003374 ORTHO05D009415 4.9e-48 194.5 126 65.9
MD02G1123500 Malus domestica HOM05D003374 ORTHO05D009415 4.9e-48 194.5 126 67.5
CSS0026426 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 6.4e-48 194.1 112 75.0
Thhalv10023081m.g Eutrema salsugineum HOM05D003374 ORTHO05D009415 6.4e-48 194.1 125 67.2
Migut.C00507 Erythranthe guttata HOM05D003374 ORTHO05D009415 1.1e-47 193.4 126 65.9
CARHR107990 Cardamine hirsuta HOM05D003374 ORTHO05D009415 1.4e-47 193.0 125 66.4
HPP92_015019 Vanilla planifolia HOM05D003374 ORTHO05D009415 1.4e-47 193.0 124 68.5
HPP92_028513 Vanilla planifolia HOM05D003374 ORTHO05D009415 1.4e-47 193.0 124 68.5
BcaC06g36302 Brassica carinata HOM05D003374 ORTHO05D009415 2.4e-47 192.2 125 66.4
MBI05_g46750_MAGBIO Magnolia biondii HOM05D003374 ORTHO05D009415 2.4e-47 192.2 108 76.9
C07p05590 Brassica napus HOM05D003374 ORTHO05D009415 3.2e-47 191.8 125 66.4
Carub.0003s3181 Capsella rubella HOM05D003374 ORTHO05D009415 5.4e-47 191.0 125 64.8
SEGI_17874 Sequoiadendron giganteum HOM05D003374 ORTHO05D009415 7.1e-47 190.7 122 69.7
BcaB03g16543 Brassica carinata HOM05D003374 ORTHO05D009415 1.2e-46 189.9 124 65.3
Sp3g31110 Schrenkiella parvula HOM05D003374 ORTHO05D009415 1.6e-46 189.5 125 66.4
BraA07t28129Z Brassica rapa HOM05D003374 ORTHO05D009415 2.1e-46 189.1 125 66.4
ATR0661G346 Amborella trichopoda HOM05D003374 ORTHO05D009415 2.7e-46 188.7 123 70.7
Prupe.7G175100 Prunus persica HOM05D003374 ORTHO05D009415 2.3e-45 185.7 122 66.4
unitig_26.g9807 Utricularia gibba HOM05D003374 ORTHO05D009415 1.1e-44 183.3 123 66.7
Actinidia22936 Actinidia chinensis HOM05D003374 ORTHO05D009415 7.3e-44 180.6 105 76.2
Os03g0136500 Oryza sativa ssp. japonica HOM05D003374 ORTHO05D009415 2.1e-43 179.1 121 66.1
FvH4_1g11071 Fragaria vesca HOM05D003374 ORTHO05D009415 3.6e-43 178.3 126 62.7
Nitab4.5_0002105g0060 Nicotiana tabacum HOM05D003374 ORTHO05D009415 3.6e-43 178.3 105 73.3
Zm00001eb002870 Zea mays HOM05D003374 ORTHO05D009415 6.2e-43 177.6 119 66.4
HanXRQChr14g0442031 Helianthus annuus HOM05D003374 ORTHO05D009415 1.8e-42 176.0 118 65.3
MD15G1237300 Malus domestica HOM05D003374 ORTHO05D009415 2.4e-42 175.6 144 56.2
MSTRG.25049 Avicennia marina HOM05D003374 ORTHO05D009415 3.1e-42 175.3 111 68.5
Nitab4.5_0006892g0030 Nicotiana tabacum HOM05D003374 ORTHO05D009415 3.1e-42 175.3 105 73.3
BolC7t40958H Brassica oleracea HOM05D003374 ORTHO05D009415 6.9e-42 174.1 110 67.3
Aa31LG8G14980 Aethionema arabicum HOM05D003374 ORTHO05D009415 4.5e-41 171.4 108 67.6
RcHm_v2.0_Chr2g0098341 Rosa chinensis HOM05D003374 ORTHO05D009415 5.8e-41 171.0 124 61.3
MELO3C013742.2 Cucumis melo HOM05D003374 ORTHO05D009415 4.9e-40 167.9 99 70.7
A07p03300 Brassica napus HOM05D003374 ORTHO05D009415 1.8e-37 159.5 103 66.0
AagrBONN_evm.TU.Sc2ySwM_362.2709 Anthoceros agrestis HOM05D003374 ORTHO05D009415 5.6e-36 154.5 121 57.0
Sed0013270 Sechium edule HOM05D003374 ORTHO05D009415 2.1e-35 152.5 99 67.7
SMO013G0010 Selaginella moellendorffii HOM05D003374 ORTHO05D009415 6.2e-35 151.0 118 55.9
AagrBONN_evm.TU.Sc2ySwM_362.2707 Anthoceros agrestis HOM05D003374 ORTHO05D009415 1.7e-32 142.9 116 55.2
Sc16g0001870 Simmondsia chinensis HOM05D003374 ORTHO05D009415 3.8e-32 141.7 90 67.8
Pp3c17_11570 Physcomitrium patens HOM05D003374 ORTHO05D009415 5.1e-29 131.3 121 47.1
Glyma.01G162300 Glycine max HOM05D003374 ORTHO05D009415 1.1e-26 123.6 76 69.7
Pp3c1_28090 Physcomitrium patens HOM05D003374 ORTHO05D009415 1.1e-26 123.6 121 47.9
Pp3c2_13370 Physcomitrium patens HOM05D003374 ORTHO05D009415 1.1e-26 123.6 121 46.3
Mapoly0037s0042 Marchantia polymorpha HOM05D003374 ORTHO05D009415 5.3e-26 121.3 119 44.5
CBR_g80133 Chara braunii HOM05D003374 ORTHO05D009415 1.0e-21 107.1 108 43.5
Actinidia17404 Actinidia chinensis HOM05D003374 ORTHO05D009415 6.1e-14 81.3 100 42.0
TWI74G0103 Tripterygium wilfordii HOM05D003340 ORTHO05D003775 3.4e-09 65.5 121 29.8
HPP92_019003 Vanilla planifolia HOM05D003340 ORTHO05D003775 7.7e-09 64.3 90 34.4
Eucgr.F04352 Eucalyptus grandis HOM05D003340 ORTHO05D003775 1.0e-08 63.9 124 32.3
Aqoxy6G00217 Aquilegia oxysepala HOM05D003340 ORTHO05D003775 3.8e-08 62.0 126 31.0
AUR62006909 Chenopodium quinoa HOM05D003340 ORTHO05D003775 3.8e-08 62.0 83 32.5
Hund26810 Selenicereus undatus HOM05D003340 ORTHO05D003775 3.8e-08 62.0 124 29.8
SGA_v2.0_scaffold52G18966 Striga asiatica HOM05D003340 ORTHO05D003775 3.8e-08 62.0 107 33.6
Lj7P340T28 Lonicera japonica HOM05D003340 ORTHO05D003775 5.0e-08 61.6 86 36.0
Nn1g08798 Nelumbo nucifera HOM05D003340 ORTHO05D003775 5.0e-08 61.6 88 33.0
Nn5g28288 Nelumbo nucifera HOM05D003340 ORTHO05D003775 5.0e-08 61.6 87 33.3
Solyc04g071630.3 Solanum lycopersicum HOM05D003340 ORTHO05D003775 1.1e-07 60.5 87 34.5
Sopen04g027620 Solanum pennellii HOM05D003340 ORTHO05D003775 1.1e-07 60.5 87 34.5
AUR62014338 Chenopodium quinoa HOM05D003340 ORTHO05D003775 1.4e-07 60.1 87 34.5
AUR62019080 Chenopodium quinoa HOM05D003340 ORTHO05D003775 1.4e-07 60.1 87 34.5
Nitab4.5_0001187g0040 Nicotiana tabacum HOM05D003340 ORTHO05D003775 1.4e-07 60.1 87 34.5
Nitab4.5_0001344g0050 Nicotiana tabacum HOM05D003340 ORTHO05D003775 1.4e-07 60.1 87 34.5
CANSAT25G3576 Cannabis sativa HOM05D003340 ORTHO05D003775 1.9e-07 59.7 87 36.8
SMO119G0032 Selaginella moellendorffii HOM05D003340 ORTHO05D003775 1.9e-07 59.7 84 33.3
Hund17293 Selenicereus undatus HOM05D003340 ORTHO05D003775 1.9e-07 59.7 107 30.8
Potri.005G070600 Populus trichocarpa HOM05D003340 ORTHO05D003775 2.5e-07 59.3 87 32.2
Sabra05G0057400 Salix brachista HOM05D003340 ORTHO05D003775 2.5e-07 59.3 85 32.9
Hund21783 Selenicereus undatus HOM05D003340 ORTHO05D003775 2.5e-07 59.3 86 32.6
EL10Ac4g09660 Beta vulgaris HOM05D003340 ORTHO05D003775 3.2e-07 58.9 123 29.3
MELO3C010478.2 Cucumis melo HOM05D003340 ORTHO05D003775 3.2e-07 58.9 123 30.9
CsaV3_4G028260 Cucumis sativus L. HOM05D003340 ORTHO05D003775 3.2e-07 58.9 123 30.9
TWI32G0782 Tripterygium wilfordii HOM05D003340 ORTHO05D003775 3.2e-07 58.9 87 36.8
HPP92_013888 Vanilla planifolia HOM05D003340 ORTHO05D003775 3.2e-07 58.9 87 33.3
HPP92_018105 Vanilla planifolia HOM05D003340 ORTHO05D003775 3.2e-07 58.9 88 30.7
Mapoly0166s0008 Marchantia polymorpha HOM05D003340 ORTHO05D003775 4.2e-07 58.5 89 36.0
Medtr3g088030 Medicago truncatula HOM05D003340 ORTHO05D003775 4.2e-07 58.5 126 28.6
Peaxi162Scf00079g00248 Petunia axillaris HOM05D003340 ORTHO05D003775 4.2e-07 58.5 86 33.7
Psat5g087400 Pisum sativum HOM05D003340 ORTHO05D003775 4.2e-07 58.5 124 27.4
PGR102G2107 Punica granatum HOM05D003340 ORTHO05D003775 4.2e-07 58.5 79 36.7
MSTRG.25383 Avicennia marina HOM05D003340 ORTHO05D003775 5.5e-07 58.2 87 34.5
Lsat_1_v5_gn_1_10021 Lactuca sativa HOM05D003340 ORTHO05D003775 5.5e-07 58.2 87 32.2
SalBow7G3799 Salvia bowleyana HOM05D003340 ORTHO05D003775 5.5e-07 58.2 86 34.9
Manes.02G163400 Manihot esculenta HOM05D003340 ORTHO05D003775 7.2e-07 57.8 87 34.5
VMungo1309G0419 Vigna mungo HOM05D003340 ORTHO05D003775 7.2e-07 57.8 87 35.6
EL10Ac1g01010 Beta vulgaris HOM05D003340 ORTHO05D003775 1.2e-06 57.0 87 32.2
ClCG11G015750 Citrullus lanatus HOM05D003340 ORTHO05D003775 1.2e-06 57.0 124 29.8
Lj4P627T24 Lonicera japonica HOM05D003340 ORTHO05D003775 1.2e-06 57.0 96 33.3
Oeu059436.2 Olea europaea HOM05D003340 ORTHO05D003775 1.2e-06 57.0 87 35.6
Rhsim06G0103500 Rhododendron simsii HOM05D003340 ORTHO05D003775 1.2e-06 57.0 89 34.8
Cc10_g11880 Coffea canephora HOM05D003340 ORTHO05D003775 1.6e-06 56.6 98 30.6
Dinv07220 Davidia involucrata HOM05D003340 ORTHO05D003775 1.6e-06 56.6 86 32.6
Dinv07260 Davidia involucrata HOM05D003340 ORTHO05D003775 1.6e-06 56.6 90 31.1
FAN15G0091 Fragaria x ananassa HOM05D003340 ORTHO05D003775 1.6e-06 56.6 88 34.1
CAN.G264.5 Capsicum annuum HOM05D003340 ORTHO05D003775 2.1e-06 56.2 85 32.9
QL09p034593 Quercus lobata HOM05D003340 ORTHO05D003775 2.1e-06 56.2 87 34.5
RcHm_v2.0_Chr6g0295821 Rosa chinensis HOM05D003340 ORTHO05D003775 2.1e-06 56.2 88 34.1
Sopen06g015140 Solanum pennellii HOM05D003340 ORTHO05D003775 2.1e-06 56.2 85 31.8
FAN20G1789 Fragaria x ananassa HOM05D003340 ORTHO05D003775 2.7e-06 55.8 88 34.1
Manes.18G077306 Manihot esculenta HOM05D003340 ORTHO05D003775 2.7e-06 55.8 87 34.5
Sabra02G0065600 Salix brachista HOM05D003340 ORTHO05D003775 2.7e-06 55.8 87 34.5
Ah.06g188530 Amaranthus hybridus HOM05D003340 ORTHO05D003775 3.6e-06 55.5 83 32.5
AagrBONN_evm.TU.Sc2ySwM_362.2682 Anthoceros agrestis HOM05D003340 ORTHO05D003775 4.7e-06 55.1 86 27.9
Potri.002G083600 Populus trichocarpa HOM05D003340 ORTHO05D003775 4.7e-06 55.1 87 34.5
TAR381G1109 Trochodendron aralioides HOM05D003340 ORTHO05D003775 4.7e-06 55.1 87 31.0
Migut.C01126 Erythranthe guttata HOM05D003340 ORTHO05D003775 6.1e-06 54.7 87 32.2
Phvul.009G125000 Phaseolus vulgaris HOM05D003340 ORTHO05D003775 6.1e-06 54.7 93 32.3
Solyc06g048850.3 Solanum lycopersicum HOM05D003340 ORTHO05D003775 6.1e-06 54.7 85 31.8
PGSC0003DMG400006659 Solanum tuberosum HOM05D003340 ORTHO05D003775 6.1e-06 54.7 85 31.8
Zm00001eb289950 Zea mays HOM05D003340 ORTHO05D003775 6.1e-06 54.7 90 31.1
Gohir.A05G268800 Gossypium hirsutum HOM05D003340 ORTHO05D003775 7.9e-06 54.3 87 33.3
Os01g0833400 Oryza sativa ssp. japonica HOM05D003340 ORTHO05D003775 7.9e-06 54.3 90 31.1


User provided reference genes

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