Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G5695 Papaver somniferum HOM05D007221 ORTHO05D009204 8.2e-100 367.1 188 100.0
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 1.6e-95 352.8 187 96.8
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 3.0e-54 215.7 190 60.0
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 1.7e-52 209.9 192 60.4
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 3.9e-49 198.7 151 68.9
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 6.6e-49 198.0 176 64.8
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 2.5e-48 196.1 185 61.6
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 9.5e-48 194.1 157 65.6
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 2.8e-47 192.6 173 63.0
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 3.6e-47 192.2 185 54.6
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 1.2e-45 187.2 184 55.4
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 1.5e-45 186.8 171 63.7
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 2.0e-45 186.4 173 59.5
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 2.6e-45 186.0 191 61.3
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 1.3e-44 183.7 185 54.1
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 2.9e-44 182.6 185 57.8
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 2.9e-44 182.6 187 58.3
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 3.7e-44 182.2 186 59.1
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 3.7e-44 182.2 171 59.1
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 8.3e-44 181.0 186 52.7
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 8.3e-44 181.0 179 55.3
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 8.3e-44 181.0 185 55.1
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 8.3e-44 181.0 174 58.6
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 1.4e-43 180.3 198 53.5
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 2.4e-43 179.5 170 58.2
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 3.2e-43 179.1 136 66.2
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 4.1e-43 178.7 181 54.1
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 4.1e-43 178.7 180 58.9
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 4.1e-43 178.7 172 57.6
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 5.4e-43 178.3 181 55.2
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 2.7e-42 176.0 128 67.2
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 1.0e-41 174.1 187 53.5
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 1.3e-41 173.7 173 57.8
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 1.7e-41 173.3 169 58.0
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 2.3e-41 172.9 183 55.2
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 3.0e-41 172.6 172 58.1
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 3.9e-41 172.2 194 54.6
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 3.9e-41 172.2 168 59.5
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 5.0e-41 171.8 194 54.1
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 7.3e-40 167.9 150 58.0
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 1.2e-39 167.2 187 52.4
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 1.6e-39 166.8 163 55.2
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 2.8e-39 166.0 184 51.1
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 2.8e-39 166.0 210 50.0
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 3.6e-39 165.6 178 53.4
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 4.7e-39 165.2 140 60.0
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 4.7e-39 165.2 184 51.1
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 1.4e-38 163.7 179 52.5
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 1.8e-38 163.3 168 55.4
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 1.8e-38 163.3 188 51.1
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 2.3e-38 162.9 184 50.0
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 3.1e-38 162.5 161 57.8
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 4.0e-38 162.2 141 61.0
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 4.0e-38 162.2 141 61.0
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 5.2e-38 161.8 134 60.4
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 6.8e-38 161.4 163 54.0
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 6.8e-38 161.4 189 51.3
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 6.8e-38 161.4 185 54.6
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 8.9e-38 161.0 142 59.9
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 8.9e-38 161.0 131 62.6
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 8.9e-38 161.0 189 50.3
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 8.9e-38 161.0 185 54.6
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 1.5e-37 160.2 144 59.0
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 1.5e-37 160.2 144 59.0
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 3.4e-37 159.1 171 54.4
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 3.4e-37 159.1 179 53.6
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 4.4e-37 158.7 163 56.4
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 5.8e-37 158.3 164 51.8
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 7.5e-37 157.9 175 53.1
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 9.9e-37 157.5 129 60.5
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 1.3e-36 157.1 138 59.4
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 1.3e-36 157.1 130 63.8
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 1.3e-36 157.1 175 51.4
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 2.9e-36 156.0 146 55.5
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 3.7e-36 155.6 146 55.5
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 3.7e-36 155.6 149 54.4
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 4.9e-36 155.2 177 53.1
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 4.9e-36 155.2 168 50.6
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 4.9e-36 155.2 151 54.3
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 1.1e-35 154.1 182 48.4
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 1.4e-35 153.7 129 58.9
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 4.1e-35 152.1 158 55.1
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 7.1e-35 151.4 110 69.1
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 9.2e-35 151.0 186 49.5
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 1.7e-33 146.7 166 51.2
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 5.6e-32 141.7 211 43.6
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 5.6e-32 141.7 140 54.3
Pp3c15_4620 Physcomitrium patens HOM05D007221 ORTHO05D009204 1.7e-28 130.2 123 53.7
Os03g0774400 Oryza sativa ssp. japonica HOM05D007221 ORTHO05D009204 3.8e-28 129.0 122 55.7
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 1.2e-26 124.0 119 54.6
Zm00001eb059140 Zea mays HOM05D007221 ORTHO05D009204 1.2e-26 124.0 172 44.8
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 2.1e-26 123.2 121 51.2
SMO356G0611 Selaginella moellendorffii HOM05D007221 ORTHO05D009204 2.1e-23 113.2 111 51.4
SEGI_36647 Sequoiadendron giganteum HOM05D007221 ORTHO05D009204 3.8e-20 102.4 121 46.3
HPP92_018706 Vanilla planifolia HOM05D007221 ORTHO05D009204 6.4e-20 101.7 92 58.7
CBR_g36819 Chara braunii HOM05D007221 ORTHO05D009204 3.5e-18 95.9 164 35.4
FAN20G2979 Fragaria x ananassa HOM05D007221 ORTHO05D009204 2.3e-17 93.2 164 37.2
FAN27G1052 Fragaria x ananassa HOM05D007221 ORTHO05D009204 3.0e-17 92.8 164 39.0
Glyma.06G032000 Glycine max HOM05D007221 ORTHO05D009204 1.9e-16 90.1 70 61.4
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 2.5e-16 89.7 66 66.7
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 1.4e-14 84.0 71 57.7
unitig_26.g9834 Utricularia gibba HOM05D007221 ORTHO05D009204 4.9e-12 75.5 49 71.4
Manes.18G026801 Manihot esculenta HOM05D007221 ORTHO05D009204 2.4e-11 73.2 55 65.5
Aqoxy71s002 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 1.3e-09 67.4 53 60.4
Dinv39425 Davidia involucrata HOM05D002064 ORTHO05D002118 7.4e-08 61.6 42 71.4


User provided reference genes

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