Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 1.2e-202 709.5 333 100.0
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 4.0e-198 694.5 333 97.6
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 6.2e-175 617.5 329 84.2
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 1.8e-174 615.9 320 87.2
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 5.2e-174 614.4 325 84.9
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 2.6e-173 612.1 329 84.2
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 5.8e-173 610.9 325 84.3
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 2.2e-172 609.0 331 82.5
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 3.7e-172 608.2 325 84.9
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 6.4e-172 607.4 325 84.6
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 1.9e-171 605.9 322 84.8
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 1.9e-171 605.9 323 83.6
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 2.4e-171 605.5 323 83.9
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 3.2e-171 605.1 323 84.2
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 3.2e-171 605.1 320 85.6
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 4.1e-171 604.7 325 83.4
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 5.4e-171 604.4 325 82.5
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 9.2e-171 603.6 322 83.9
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 1.2e-170 603.2 327 82.9
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 1.6e-170 602.8 320 86.2
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 4.6e-170 601.3 322 84.5
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 6.0e-170 600.9 322 83.9
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 6.0e-170 600.9 322 83.2
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 6.0e-170 600.9 323 82.0
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 6.0e-170 600.9 323 83.3
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 6.0e-170 600.9 320 84.4
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 6.0e-170 600.9 322 84.5
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 1.0e-169 600.1 325 83.4
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 1.0e-169 600.1 327 82.9
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 1.3e-169 599.7 320 84.4
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 1.7e-169 599.4 322 83.9
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 1.7e-169 599.4 321 84.1
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 3.0e-169 598.6 323 82.7
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 5.1e-169 597.8 320 84.1
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 6.6e-169 597.4 335 81.5
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 8.6e-169 597.0 320 82.8
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 1.1e-168 596.7 321 83.5
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 3.3e-168 595.1 322 82.0
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 5.6e-168 594.3 346 78.3
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 7.3e-168 594.0 316 84.5
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 9.5e-168 593.6 318 83.6
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 1.6e-167 592.8 327 82.6
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 6.2e-167 590.9 320 82.8
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 6.2e-167 590.9 322 82.6
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 8.1e-167 590.5 320 82.8
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.1e-166 590.1 320 82.2
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 2.3e-166 589.0 322 82.0
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 3.1e-166 588.6 320 81.9
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 4.0e-166 588.2 322 82.3
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 8.9e-166 587.0 320 81.9
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 3.4e-165 585.1 319 82.4
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 3.4e-165 585.1 320 81.6
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 1.3e-164 583.2 320 81.6
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 1.7e-164 582.8 317 81.1
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 6.4e-164 580.9 324 82.4
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 8.3e-164 580.5 318 81.4
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 1.4e-163 579.7 320 81.6
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 1.4e-163 579.7 316 81.6
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 2.4e-163 578.9 315 81.9
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 5.4e-163 577.8 352 76.4
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 7.1e-163 577.4 327 81.7
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 7.1e-163 577.4 319 80.6
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 1.6e-162 576.2 313 80.8
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 2.7e-162 575.5 317 80.8
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 6.0e-162 574.3 321 79.1
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 1.3e-161 573.2 321 79.1
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 1.7e-161 572.8 316 80.4
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 3.0e-161 572.0 318 80.2
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 3.0e-161 572.0 343 76.4
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 5.1e-161 571.2 322 80.1
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 5.1e-161 571.2 322 79.5
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 1.1e-160 570.1 317 81.4
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 3.3e-160 568.5 326 81.0
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 1.2e-159 566.6 316 79.4
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 2.1e-159 565.8 313 80.2
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 3.6e-159 565.1 328 77.1
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 4.7e-159 564.7 313 80.2
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 4.7e-159 564.7 313 80.2
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 2.4e-158 562.4 315 80.3
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 5.4e-155 551.2 345 72.8
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 3.0e-153 545.4 319 75.5
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 5.1e-153 544.7 331 75.5
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 1.5e-152 543.1 291 82.8
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 1.6e-151 539.7 342 72.2
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 2.1e-151 539.3 330 77.3
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 1.1e-150 537.0 356 71.3
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 2.0e-149 532.7 324 76.2
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 5.8e-149 531.2 320 76.2
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 4.6e-146 521.5 288 79.2
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 5.6e-144 514.6 319 72.1
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 8.1e-143 510.8 285 80.0
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 4.5e-141 505.0 323 69.0
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 9.9e-141 503.8 324 68.8
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 1.6e-138 496.5 316 72.8
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 3.5e-138 495.4 316 68.4
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 2.5e-128 462.6 568 46.0
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 1.2e-125 453.8 316 64.9
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 2.5e-120 436.0 249 79.5
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 6.3e-103 378.3 268 67.5
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 3.5e-101 372.5 194 84.5
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 3.8e-100 369.0 279 64.2
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 5.2e-97 358.6 228 74.1
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 2.1e-90 336.7 352 46.3
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 2.7e-82 309.7 313 45.4
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 5.2e-81 305.4 314 45.2
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 6.8e-81 305.1 351 43.9
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 6.1e-74 282.0 169 77.5
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 1.8e-57 227.3 161 68.3
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 3.7e-55 219.5 187 56.1
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.1e-54 218.0 123 77.2
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 2.4e-54 216.9 334 38.3
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 5.2e-49 199.1 135 71.1
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 3.2e-46 189.9 205 50.2
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 2.1e-45 187.2 193 47.2
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 2.9e-31 140.2 83 72.3
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 3.8e-23 113.2 57 87.7
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 2.9e-15 87.0 84 47.6
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 1.8e-12 77.8 74 58.1
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 1.5e-11 74.7 39 74.4
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 5.8e-08 62.8 34 73.5
Hma1.2p1_0200F.1_g086050 Hydrangea macrophylla HOM05D006483 ORTHO05D007837 2.9e-07 60.5 71 46.5
VMungo0251G1525 Vigna mungo HOM05D000363 ORTHO05D000236 6.5e-07 59.3 122 28.7
Glyma.13G182100 Glycine max HOM05D000363 ORTHO05D000236 2.5e-06 57.4 122 30.3
ClCG01G022790 Citrullus lanatus HOM05D000363 ORTHO05D000236 3.2e-06 57.0 100 31.0
RcHm_v2.0_Chr5g0007821 Rosa chinensis HOM05D000363 ORTHO05D000236 3.2e-06 57.0 100 32.0
FAN16G1656 Fragaria x ananassa HOM05D000363 ORTHO05D000236 5.5e-06 56.2 100 32.0
Zm00001eb049690 Zea mays HOM05D003600 ORTHO05D004129 5.5e-06 56.2 35 62.9
HPP92_001752 Vanilla planifolia HOM05D000363 ORTHO05D000236 7.2e-06 55.8 130 29.2


User provided reference genes

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