Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G5532 Papaver somniferum HOM05D006536 ORTHO05D005877 3.6e-74 281.6 148 100.0
PSO541G4685 Papaver somniferum HOM05D006536 ORTHO05D005877 8.8e-65 250.4 148 89.2
PSO478G5239 Papaver somniferum HOM05D006536 ORTHO05D005877 2.6e-61 238.8 149 86.6
PSO541G3913 Papaver somniferum HOM05D006536 ORTHO05D005877 1.1e-59 233.4 149 85.2
PSO675G9181 Papaver somniferum HOM05D006536 ORTHO05D005877 1.1e-59 233.4 142 87.3
PSO541G2788 Papaver somniferum HOM05D006536 ORTHO05D005877 1.5e-59 233.0 143 86.7
PSO017G6165 Papaver somniferum HOM05D006536 ORTHO05D005877 2.0e-48 196.1 148 75.0
CDE05G1907 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 2.8e-18 95.9 143 42.0
Dinv26537 Davidia involucrata HOM05D006536 ORTHO05D005877 6.2e-18 94.7 145 46.2
CDE11G0553 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 8.1e-18 94.4 148 39.9
Nitab4.5_0000472g0270 Nicotiana tabacum HOM05D006536 ORTHO05D005877 5.8e-16 88.2 130 41.5
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 9.9e-16 87.4 135 43.0
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.3e-15 87.0 146 40.4
CDE11G0063 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 6.4e-15 84.7 144 38.9
PSO782G1199 Papaver somniferum HOM05D006536 ORTHO05D005877 6.4e-15 84.7 71 62.0
Nitab4.5_0006023g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.1e-14 84.0 134 39.6
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 2.4e-14 82.8 147 38.1
Peaxi162Scf00450g00854 Petunia axillaris HOM05D006536 ORTHO05D005877 2.4e-14 82.8 144 40.3
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 4.1e-14 82.0 143 39.9
Peaxi162Scf00450g00873 Petunia axillaris HOM05D006536 ORTHO05D005877 5.4e-14 81.6 136 41.2
SGA_v2.0_scaffold13G06718 Striga asiatica HOM05D006536 ORTHO05D005877 5.4e-14 81.6 116 44.8
SGA_v2.0_scaffold13G06717 Striga asiatica HOM05D006536 ORTHO05D005877 1.6e-13 80.1 150 40.0
ClCG10G005680 Citrullus lanatus HOM05D006536 ORTHO05D005877 2.1e-13 79.7 133 39.8
Nitab4.5_0001479g0070 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.1e-13 79.7 116 43.1
Sed0024994 Sechium edule HOM05D006536 ORTHO05D005877 4.6e-13 78.6 133 40.6
unitig_744.g24698 Utricularia gibba HOM05D009374 ORTHO05D005877 4.6e-13 78.6 138 34.8
Nitab4.5_0004487g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.0e-12 77.4 107 41.1
CANSAT54G1080 Cannabis sativa HOM05D006536 ORTHO05D005877 1.3e-12 77.0 140 37.9
Hma1.2p1_0745F.1_g212040 Hydrangea macrophylla HOM05D006536 ORTHO05D005877 2.3e-12 76.3 145 37.2
Nitab4.5_0001479g0060 Nicotiana tabacum HOM05D006536 ORTHO05D005877 5.1e-12 75.1 110 40.9
Peaxi162Scf00714g00425 Petunia axillaris HOM05D006536 ORTHO05D005877 5.1e-12 75.1 140 40.0
Peaxi162Scf00450g00816 Petunia axillaris HOM05D006536 ORTHO05D005877 1.9e-11 73.2 138 37.0
MELO3C025418.2 Cucumis melo HOM05D006536 ORTHO05D005877 7.3e-11 71.2 134 37.3
Nitab4.5_0008018g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 7.3e-11 71.2 110 40.0
Peaxi162Scf00714g00424 Petunia axillaris HOM05D006536 ORTHO05D005877 9.5e-11 70.9 136 38.2
AUR62015663 Chenopodium quinoa HOM05D009374 ORTHO05D005877 1.2e-10 70.5 125 36.0
Nn1g07021 Nelumbo nucifera HOM05D023228 ORTHO05D005877 1.6e-10 70.1 139 38.8
CAN.G981.18 Capsicum annuum HOM05D006536 ORTHO05D005877 2.1e-10 69.7 133 37.6
Migut.J01038 Erythranthe guttata HOM05D006536 ORTHO05D005877 2.1e-10 69.7 124 38.7
Eucgr.F03431 Eucalyptus grandis HOM05D006536 ORTHO05D005877 2.1e-10 69.7 155 34.8
unitig_8.g4307 Utricularia gibba HOM05D006536 ORTHO05D005877 2.1e-10 69.7 145 33.1
HanXRQChr11g0332911 Helianthus annuus HOM05D009374 ORTHO05D012864 3.6e-10 68.9 152 29.6
AUR62020540 Chenopodium quinoa HOM05D009374 ORTHO05D005877 4.7e-10 68.6 133 33.1
ECA236G4404 Erigeron canadensis HOM05D009374 ORTHO05D012864 4.7e-10 68.6 146 35.6
HanXRQChr11g0332931 Helianthus annuus HOM05D009374 ORTHO05D012864 4.7e-10 68.6 153 31.4
Nitab4.5_0003924g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 4.7e-10 68.6 134 38.8
SGA_v2.0_scaffold75G24748 Striga asiatica HOM05D006536 ORTHO05D005877 6.2e-10 68.2 146 37.7
Nn1g07020 Nelumbo nucifera HOM05D023228 ORTHO05D005877 8.1e-10 67.8 140 37.9
PGSC0003DMG400001033 Solanum tuberosum HOM05D006536 ORTHO05D005877 8.1e-10 67.8 137 35.8
Nitab4.5_0001479g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.1e-09 67.4 146 35.6
SalBow3G0084 Salvia bowleyana HOM05D003262 ORTHO05D003608 1.1e-09 67.4 157 36.9
ClCG09G018590 Citrullus lanatus HOM05D006536 ORTHO05D005877 1.4e-09 67.0 126 36.5
Solyc07g064210.2 Solanum lycopersicum HOM05D006536 ORTHO05D005877 1.4e-09 67.0 136 34.6
Sopen07g032350 Solanum pennellii HOM05D006536 ORTHO05D005877 2.4e-09 66.2 103 37.9
Migut.J01035 Erythranthe guttata HOM05D006536 ORTHO05D005877 3.1e-09 65.9 149 36.2
CANSAT54G2394 Cannabis sativa HOM05D006536 ORTHO05D005877 4.0e-09 65.5 89 39.3
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 4.0e-09 65.5 136 37.5
ClCG10G005660 Citrullus lanatus HOM05D006536 ORTHO05D005877 5.2e-09 65.1 147 32.0
Eucgr.F00976 Eucalyptus grandis HOM05D006536 ORTHO05D005877 6.8e-09 64.7 134 29.9
Lsat_1_v5_gn_7_106501 Lactuca sativa HOM05D009374 ORTHO05D012864 6.8e-09 64.7 144 34.0
Nitab4.5_0000397g0180 Nicotiana tabacum HOM05D006536 ORTHO05D005877 6.8e-09 64.7 102 38.2
Migut.J01041 Erythranthe guttata HOM05D006536 ORTHO05D005877 8.9e-09 64.3 158 36.7
HanXRQChr11g0337791 Helianthus annuus HOM05D009374 ORTHO05D012864 8.9e-09 64.3 150 28.7
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 8.9e-09 64.3 148 35.1
MBI18_g21250_MAGBIO Magnolia biondii HOM05D006536 ORTHO05D005877 1.2e-08 63.9 108 41.7
Solyc07g064220.1 Solanum lycopersicum HOM05D006536 ORTHO05D005877 1.2e-08 63.9 122 36.1
Sopen07g032360 Solanum pennellii HOM05D006536 ORTHO05D005877 1.2e-08 63.9 137 35.0
Oeu022218.1 Olea europaea HOM05D006536 ORTHO05D005877 1.5e-08 63.5 108 32.4
Ah.06g183000 Amaranthus hybridus HOM05D001264 ORTHO05D001167 2.6e-08 62.8 143 32.9
Migut.H00699 Erythranthe guttata HOM05D006536 ORTHO05D005877 2.6e-08 62.8 134 32.8
Lsat_1_v5_gn_5_5901 Lactuca sativa HOM05D009374 ORTHO05D005877 2.6e-08 62.8 158 29.1
Nitab4.5_0003461g0020 Nicotiana tabacum HOM05D003749 ORTHO05D004421 2.6e-08 62.8 102 41.2
CAN.G981.16 Capsicum annuum HOM05D006536 ORTHO05D005877 3.4e-08 62.4 141 36.2
Nn1g07017 Nelumbo nucifera HOM05D023228 ORTHO05D005877 3.4e-08 62.4 140 36.4
PGR083G1686 Punica granatum HOM05D006536 ORTHO05D005877 4.4e-08 62.0 166 34.9
Lsat_1_v5_gn_3_115400 Lactuca sativa HOM05D006536 ORTHO05D005877 7.6e-08 61.2 145 31.0
ATR0686G133 Amborella trichopoda HOM05D031825 ORTHO05D005877 9.9e-08 60.8 136 31.6
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 9.9e-08 60.8 146 30.1
vmacro11762 Vaccinium macrocarpon HOM05D006536 ORTHO05D005877 1.3e-07 60.5 110 37.3
SHI31832 Sapria himalayana HOM05D006536 ORTHO05D005877 1.7e-07 60.1 131 32.8
THA.LOC104813415 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.7e-07 60.1 149 32.2
AL8G30160 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 2.2e-07 59.7 140 33.6
AT5G54740 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 2.2e-07 59.7 140 32.9
MELO3C032238.2 Cucumis melo HOM05D006536 ORTHO05D005877 2.2e-07 59.7 94 35.1
SGA_v2.0_scaffold20G09060 Striga asiatica HOM05D006536 ORTHO05D005877 2.2e-07 59.7 98 33.7
CsaV3_3G005360 Cucumis sativus L. HOM05D006536 ORTHO05D005877 2.9e-07 59.3 94 35.1
HanXRQChr13g0408641 Helianthus annuus HOM05D009374 ORTHO05D005877 2.9e-07 59.3 145 32.4
Lsat_1_v5_gn_7_93341 Lactuca sativa HOM05D009374 ORTHO05D012864 2.9e-07 59.3 145 29.7
Lsat_1_v5_gn_7_93361 Lactuca sativa HOM05D009374 ORTHO05D012864 2.9e-07 59.3 145 29.7
Lsat_1_v5_gn_7_93381 Lactuca sativa HOM05D009374 ORTHO05D012864 2.9e-07 59.3 145 29.7
Lsat_1_v5_gn_7_93441 Lactuca sativa HOM05D009374 ORTHO05D012864 2.9e-07 59.3 145 29.7
Lsat_1_v5_gn_7_93500 Lactuca sativa HOM05D009374 ORTHO05D012864 2.9e-07 59.3 145 29.7
Lsat_1_v5_gn_7_93520 Lactuca sativa HOM05D009374 ORTHO05D012864 2.9e-07 59.3 145 29.7
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.8e-07 58.9 145 34.5
CANSAT11G1392 Cannabis sativa HOM05D006536 ORTHO05D005877 4.9e-07 58.5 104 33.7
Migut.J01036 Erythranthe guttata HOM05D006536 ORTHO05D005877 4.9e-07 58.5 127 35.4
QL08p012979 Quercus lobata HOM05D006536 ORTHO05D005877 6.4e-07 58.2 143 32.2
Sabra11G0120700 Salix brachista HOM05D006536 ORTHO05D005877 8.4e-07 57.8 140 32.1
Sopen07g032370 Solanum pennellii HOM05D006536 ORTHO05D005877 8.4e-07 57.8 127 33.1
ATR0686G059 Amborella trichopoda HOM05D031825 ORTHO05D005877 1.1e-06 57.4 138 29.7
EL10Ac4g07942 Beta vulgaris HOM05D009374 ORTHO05D005877 1.1e-06 57.4 139 30.2
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.4e-06 57.0 149 32.2
Sopen08g028810 Solanum pennellii HOM05D006536 ORTHO05D005877 1.9e-06 56.6 119 34.5
Nitab4.5_0005213g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.4e-06 56.2 142 33.8
Migut.M01805 Erythranthe guttata HOM05D036104 ORTHO05D035166 3.2e-06 55.8 112 36.6
Peaxi162Scf00714g00432 Petunia axillaris HOM05D006536 ORTHO05D005877 3.2e-06 55.8 100 38.0
Sp6g16690 Schrenkiella parvula HOM05D007475 ORTHO05D009529 3.2e-06 55.8 145 34.5
Lsat_1_v5_gn_3_115460 Lactuca sativa HOM05D006536 ORTHO05D005877 4.2e-06 55.5 146 32.9
Migut.M01754 Erythranthe guttata HOM05D036104 ORTHO05D035166 5.4e-06 55.1 113 35.4
Eucgr.F00977 Eucalyptus grandis HOM05D006536 ORTHO05D005877 7.1e-06 54.7 149 29.5
HanXRQChr15g0493431 Helianthus annuus HOM05D009374 ORTHO05D012864 7.1e-06 54.7 110 30.9


User provided reference genes

Program Settings