Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G5395 Papaver somniferum HOM05D002065 ORTHO05D002050 4.2e-130 468.0 234 100.0
PSO675G9369 Papaver somniferum HOM05D002065 ORTHO05D002050 4.6e-76 288.5 221 69.7
PSO675G3057 Papaver somniferum HOM05D002065 ORTHO05D002050 1.2e-63 247.3 189 67.2
PSO675G4715 Papaver somniferum HOM05D002065 ORTHO05D002050 2.2e-46 189.9 206 56.3
PSO675G4486 Papaver somniferum HOM05D002065 ORTHO05D002050 1.4e-43 180.6 228 49.6
PSO675G5459 Papaver somniferum HOM05D002065 ORTHO05D002050 5.0e-38 162.2 201 49.3
PSO541G2674 Papaver somniferum HOM05D002065 ORTHO05D002050 9.4e-29 131.3 192 41.1
PSO017G0621 Papaver somniferum HOM05D002065 ORTHO05D002050 6.1e-28 128.6 213 41.8
PSO063G4351 Papaver somniferum HOM05D002065 ORTHO05D002050 3.0e-27 126.3 186 40.3
PSO732G0449 Papaver somniferum HOM05D002065 ORTHO05D002050 1.2e-26 124.4 188 43.1
PSO675G1570 Papaver somniferum HOM05D002065 ORTHO05D002050 1.5e-26 124.0 208 41.8
PSO541G3356 Papaver somniferum HOM05D002065 ORTHO05D002050 2.6e-26 123.2 210 41.4
PSO675G5185 Papaver somniferum HOM05D002065 ORTHO05D002050 3.3e-26 122.9 188 42.6
PSO675G6910 Papaver somniferum HOM05D002065 ORTHO05D002050 4.4e-26 122.5 219 38.8
PSO017G7112 Papaver somniferum HOM05D002065 ORTHO05D002050 3.7e-25 119.4 164 41.5
Dinv22303 Davidia involucrata HOM05D002065 ORTHO05D002050 1.1e-24 117.9 192 41.7
PSO017G2212 Papaver somniferum HOM05D002065 ORTHO05D002050 5.3e-24 115.5 209 38.8
Dinv40711 Davidia involucrata HOM05D002065 ORTHO05D001766 7.0e-24 115.2 172 44.2
TAR626G0982 Trochodendron aralioides HOM05D002065 ORTHO05D002050 7.0e-24 115.2 235 39.6
TAR629G2752 Trochodendron aralioides HOM05D002065 ORTHO05D002050 9.1e-24 114.8 229 38.0
Cc05_g13270 Coffea canephora HOM05D002065 ORTHO05D002050 1.2e-23 114.4 212 38.7
PSO541G3516 Papaver somniferum HOM05D002065 ORTHO05D002050 1.2e-23 114.4 202 40.1
TAR626G1743 Trochodendron aralioides HOM05D002065 ORTHO05D002050 7.7e-23 111.7 224 38.8
PSO500G0109 Papaver somniferum HOM05D002065 ORTHO05D002050 2.9e-22 109.8 168 42.9
PSO349G0281 Papaver somniferum HOM05D002065 ORTHO05D002050 3.8e-22 109.4 211 38.4
Migut.M01810 Erythranthe guttata HOM05D002065 ORTHO05D002050 5.0e-22 109.0 199 37.7
Hma1.2p1_1564F.1_g290830 Hydrangea macrophylla HOM05D002065 ORTHO05D002050 6.5e-22 108.6 192 39.1
Actinidia35318 Actinidia chinensis HOM05D000018 ORTHO05D001766 2.1e-20 103.6 169 42.0
PSO170G3882 Papaver somniferum HOM05D002065 ORTHO05D002050 6.1e-20 102.1 179 36.3
PSO302G0191 Papaver somniferum HOM05D002065 ORTHO05D002050 3.0e-19 99.8 219 34.7
PSO541G2417 Papaver somniferum HOM05D002065 ORTHO05D002050 5.2e-19 99.0 166 39.2
PSO675G5485 Papaver somniferum HOM05D002065 ORTHO05D002050 5.2e-19 99.0 178 37.6
Sed0026241 Sechium edule HOM05D002065 ORTHO05D002050 5.2e-19 99.0 201 36.8
ClCG05G014750 Citrullus lanatus HOM05D002065 ORTHO05D002050 8.8e-19 98.2 224 34.4
Aqoxy4G02007 Aquilegia oxysepala HOM05D002065 ORTHO05D002050 1.2e-18 97.8 214 35.5
MD11G1225800 Malus domestica HOM05D002065 ORTHO05D002050 1.5e-18 97.4 198 35.4
Oeu007632.1 Olea europaea HOM05D002065 ORTHO05D002050 2.6e-18 96.7 222 33.8
RhsimUnG0253100 Rhododendron simsii HOM05D002065 ORTHO05D002050 5.7e-18 95.5 215 37.2
Hma1.2p1_1869F.1_g306060 Hydrangea macrophylla HOM05D002065 ORTHO05D002050 7.5e-18 95.1 155 41.3
MELO3C018104.2 Cucumis melo HOM05D002065 ORTHO05D002050 1.3e-17 94.4 198 35.9
Actinidia09932 Actinidia chinensis HOM05D002065 ORTHO05D002050 1.7e-17 94.0 208 37.0
Cfa020412 Carpinus fangiana HOM05D002065 ORTHO05D002050 2.8e-17 93.2 206 35.4
MBI18_g41997_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 3.7e-17 92.8 230 36.1
MBI18_g44238_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 8.3e-17 91.7 214 36.9
PSO063G2330 Papaver somniferum HOM05D002065 ORTHO05D002050 1.1e-16 91.3 168 35.7
MSTRG.14416 Avicennia marina HOM05D002065 ORTHO05D002050 1.4e-16 90.9 202 36.1
Haze_09616 Corylus avellana HOM05D002065 ORTHO05D002050 1.8e-16 90.5 207 34.3
PGR083G2635 Punica granatum HOM05D002065 ORTHO05D002050 1.8e-16 90.5 197 37.6
Sed0007986 Sechium edule HOM05D002065 ORTHO05D002050 1.8e-16 90.5 221 33.5
Lj8P166T75 Lonicera japonica HOM05D002065 ORTHO05D002050 2.4e-16 90.1 189 34.9
Manes.03G123200 Manihot esculenta HOM05D002065 ORTHO05D002050 2.4e-16 90.1 199 33.2
Gorai.002G082700 Gossypium raimondii HOM05D002065 ORTHO05D002050 3.1e-16 89.7 220 35.5
QL08p013247 Quercus lobata HOM05D002065 ORTHO05D002050 3.1e-16 89.7 218 33.5
SGA_v2.0_scaffold27G11640 Striga asiatica HOM05D002065 ORTHO05D002050 3.1e-16 89.7 233 35.2
MBI18_g44237_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 4.1e-16 89.4 173 37.6
Peaxi162Scf00192g00005 Petunia axillaris HOM05D002065 ORTHO05D002050 4.1e-16 89.4 159 34.6
EL10Ac4g07955 Beta vulgaris HOM05D002065 ORTHO05D002050 5.4e-16 89.0 219 33.8
Cfa020411 Carpinus fangiana HOM05D002065 ORTHO05D002050 5.4e-16 89.0 201 32.8
AUR62015652 Chenopodium quinoa HOM05D002065 ORTHO05D002050 5.4e-16 89.0 182 35.2
AUR62020549 Chenopodium quinoa HOM05D002065 ORTHO05D002050 5.4e-16 89.0 182 34.6
Nitab4.5_0000092g0090 Nicotiana tabacum HOM05D002065 ORTHO05D002050 5.4e-16 89.0 224 32.1
Atru.chr2.3214 Acer truncatum HOM05D002065 ORTHO05D002050 7.0e-16 88.6 225 33.3
MBI18_g44236_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 7.0e-16 88.6 190 35.8
TWI38G0302 Tripterygium wilfordii HOM05D002065 ORTHO05D002050 7.0e-16 88.6 203 32.0
CiPaw.11G184100 Carya illinoinensis HOM05D002065 ORTHO05D002050 9.1e-16 88.2 216 34.3
Gohir.D01G061300 Gossypium hirsutum HOM05D002065 ORTHO05D002050 9.1e-16 88.2 220 35.0
MD03G1211100 Malus domestica HOM05D002065 ORTHO05D002050 9.1e-16 88.2 201 31.8
Sp3g18610 Schrenkiella parvula HOM05D002065 ORTHO05D002050 9.1e-16 88.2 220 32.7
TWI39G0180 Tripterygium wilfordii HOM05D002065 ORTHO05D002050 9.1e-16 88.2 201 32.8
RcHm_v2.0_Chr5g0037701 Rosa chinensis HOM05D002065 ORTHO05D002050 1.2e-15 87.8 224 31.7
Ciclev10009510m.g Citrus clementina HOM05D002065 ORTHO05D002050 1.6e-15 87.4 196 36.2
MD03G1210900 Malus domestica HOM05D002065 ORTHO05D002050 2.0e-15 87.0 201 32.3
FAN21G3193 Fragaria x ananassa HOM05D002065 ORTHO05D002050 5.9e-15 85.5 229 30.1
BcaB04g19117 Brassica carinata HOM05D002065 ORTHO05D002050 7.7e-15 85.1 217 30.9
CsaV3_3G023120 Cucumis sativus L. HOM05D002065 ORTHO05D002050 7.7e-15 85.1 222 32.9
Gohir.A01G074800 Gossypium hirsutum HOM05D002065 ORTHO05D002050 7.7e-15 85.1 220 34.1
Lj8C77T5 Lonicera japonica HOM05D002065 ORTHO05D002050 7.7e-15 85.1 198 36.4
Haze_09617 Corylus avellana HOM05D002065 ORTHO05D002050 1.0e-14 84.7 201 30.8
DCAR_022527 Daucus carota HOM05D002065 ORTHO05D002050 1.0e-14 84.7 213 34.3
THA.LOC104817885 Tarenaya hassleriana HOM05D002065 ORTHO05D002050 1.0e-14 84.7 184 33.7
Aqoxy4G00180 Aquilegia oxysepala HOM05D002065 ORTHO05D002050 1.3e-14 84.3 199 34.2
BcaC09g49003 Brassica carinata HOM05D002065 ORTHO05D002050 2.3e-14 83.6 200 31.5
FAN16G0462 Fragaria x ananassa HOM05D002065 ORTHO05D002050 2.9e-14 83.2 229 30.1
CARHR096380 Cardamine hirsuta HOM05D002065 ORTHO05D002050 3.8e-14 82.8 190 31.6
PSO210G3167 Papaver somniferum HOM05D002065 ORTHO05D002050 3.8e-14 82.8 192 33.3
BolC1t04321H Brassica oleracea HOM05D002065 ORTHO05D002050 5.0e-14 82.4 214 31.8
A01p34210 Brassica napus HOM05D002065 ORTHO05D002050 6.5e-14 82.0 214 31.8
BraA01t03521Z Brassica rapa HOM05D002065 ORTHO05D002050 6.5e-14 82.0 214 31.8
BraA03t13337Z Brassica rapa HOM05D002065 ORTHO05D002050 6.5e-14 82.0 220 30.9
Carub.0003s2057 Capsella rubella HOM05D002065 ORTHO05D002050 8.6e-14 81.6 223 31.4
Oeu025495.1 Olea europaea HOM05D002065 ORTHO05D002050 8.6e-14 81.6 197 32.0
Thhalv10021500m.g Eutrema salsugineum HOM05D002065 ORTHO05D002050 1.1e-13 81.3 217 30.4
Oeu025506.1 Olea europaea HOM05D002065 ORTHO05D002050 1.1e-13 81.3 197 32.0
BcaB04g20643 Brassica carinata HOM05D002065 ORTHO05D002050 1.5e-13 80.9 217 29.5
BcaC01g03546 Brassica carinata HOM05D002065 ORTHO05D002050 1.5e-13 80.9 220 30.9
A03p41840 Brassica napus HOM05D002065 ORTHO05D002050 1.5e-13 80.9 220 30.9
C03p51220 Brassica napus HOM05D002065 ORTHO05D002050 1.5e-13 80.9 220 30.9
BolC3t17412H Brassica oleracea HOM05D002065 ORTHO05D002050 1.5e-13 80.9 220 30.9
MD03G1211000 Malus domestica HOM05D002065 ORTHO05D002050 1.5e-13 80.9 202 31.2
Oeu025490.1 Olea europaea HOM05D002065 ORTHO05D002050 1.9e-13 80.5 187 32.1
Oeu025507.1 Olea europaea HOM05D002065 ORTHO05D002050 2.5e-13 80.1 197 32.0
PSO675G6218 Papaver somniferum HOM05D002065 ORTHO05D002050 2.5e-13 80.1 146 38.4
Medtr2g082990 Medicago truncatula HOM05D002065 ORTHO05D002050 7.2e-13 78.6 199 33.2
FvH4_3g21890 Fragaria vesca HOM05D002065 ORTHO05D002050 9.5e-13 78.2 224 29.5
FAN11G3928 Fragaria x ananassa HOM05D002065 ORTHO05D002050 9.5e-13 78.2 224 29.5
Nn1g07007 Nelumbo nucifera HOM05D002065 ORTHO05D002050 9.5e-13 78.2 216 30.6
Migut.M00328 Erythranthe guttata HOM05D002065 ORTHO05D002050 1.2e-12 77.8 200 32.5
Sabra16G0283800 Salix brachista HOM05D002065 ORTHO05D002050 2.8e-12 76.6 191 33.5
Sabra11G0120300 Salix brachista HOM05D002065 ORTHO05D002050 3.6e-12 76.3 187 31.0
Migut.M00312 Erythranthe guttata HOM05D002065 ORTHO05D002050 4.7e-12 75.9 211 29.4
Cpa.g.c26548.3 Carica papaya HOM05D002065 ORTHO05D002050 6.1e-12 75.5 226 31.0
Oeu042915.1 Olea europaea HOM05D002065 ORTHO05D002050 1.0e-11 74.7 157 34.4
PSO063G7368 Papaver somniferum HOM05D002065 ORTHO05D002050 1.8e-11 73.9 125 37.6
AL3G34460 Arabidopsis lyrata HOM05D002065 ORTHO05D002050 2.3e-11 73.6 217 29.5
ATR0794G125 Amborella trichopoda HOM05D002065 ORTHO05D002050 3.0e-11 73.2 159 33.3
Sp3g18650 Schrenkiella parvula HOM05D002065 ORTHO05D002050 3.0e-11 73.2 186 29.6
AT3G20590 Arabidopsis thaliana HOM05D002065 ORTHO05D002050 5.2e-11 72.4 199 28.1
Carub.0003s2058 Capsella rubella HOM05D002065 ORTHO05D002050 5.2e-11 72.4 182 32.4
PSO302G0041 Papaver somniferum HOM05D002065 ORTHO05D002050 5.2e-11 72.4 229 27.9
ATR0794G057 Amborella trichopoda HOM05D002065 ORTHO05D002050 1.5e-10 70.9 148 33.8
AT3G20600 Arabidopsis thaliana HOM05D002065 ORTHO05D002050 1.5e-10 70.9 214 28.0
Hma1.2p1_1564F.1_g290840 Hydrangea macrophylla HOM05D002065 ORTHO05D002050 2.0e-10 70.5 106 42.5
Nitab4.5_0005041g0020 Nicotiana tabacum HOM05D002065 ORTHO05D002050 2.6e-10 70.1 144 32.6
PSO675G4306 Papaver somniferum HOM05D002065 ORTHO05D002050 2.6e-10 70.1 146 30.8
Psat7g161480 Pisum sativum HOM05D002065 ORTHO05D002050 2.6e-10 70.1 211 30.8
PSO675G5832 Papaver somniferum HOM05D002065 ORTHO05D002050 4.4e-10 69.3 204 30.4
AL3G34450 Arabidopsis lyrata HOM05D002065 ORTHO05D002050 5.7e-10 68.9 184 30.4
Sp3g18640 Schrenkiella parvula HOM05D002065 ORTHO05D002050 5.7e-10 68.9 225 28.9
Glyma.12G214100 Glycine max HOM05D002065 ORTHO05D002050 7.5e-10 68.6 195 31.8
Medtr4g081200 Medicago truncatula HOM05D002065 ORTHO05D002050 7.5e-10 68.6 231 29.9
AUR62020552 Chenopodium quinoa HOM05D002065 ORTHO05D002050 1.7e-09 67.4 175 29.7
BcaC05g28309 Brassica carinata HOM05D002065 ORTHO05D002050 2.2e-09 67.0 215 30.7
C05p43700 Brassica napus HOM05D002065 ORTHO05D002050 2.2e-09 67.0 215 30.7
Ca_01751_v3 Cicer arietinum L. HOM05D002065 ORTHO05D002050 2.2e-09 67.0 231 30.7
BraA05t21707Z Brassica rapa HOM05D002065 ORTHO05D002050 2.8e-09 66.6 209 28.7
Lj3g0020040 Lotus japonicus HOM05D002065 ORTHO05D002050 2.8e-09 66.6 204 31.4
A05p28250 Brassica napus HOM05D001038 ORTHO05D019929 4.9e-09 65.9 179 29.6
DCAR_020516 Daucus carota HOM05D002065 ORTHO05D002050 4.9e-09 65.9 167 31.1
AT3G20610 Arabidopsis thaliana HOM05D002065 ORTHO05D002050 6.3e-09 65.5 202 28.7
AUR62015650 Chenopodium quinoa HOM05D002065 ORTHO05D002050 1.4e-08 64.3 188 28.2
Aa31LG8G7400 Aethionema arabicum HOM05D002065 ORTHO05D002050 1.8e-08 63.9 185 30.8
Sc01g0007380 Simmondsia chinensis HOM05D002065 ORTHO05D002050 1.8e-08 63.9 128 39.1
Aa31LG8G7410 Aethionema arabicum HOM05D002065 ORTHO05D002050 2.4e-08 63.5 186 31.2
PSO832G1891 Papaver somniferum HOM05D002065 ORTHO05D002050 2.4e-08 63.5 179 33.5
AUR62020550 Chenopodium quinoa HOM05D002065 ORTHO05D002050 3.1e-08 63.2 190 28.9
Glyma.13G287500 Glycine max HOM05D002065 ORTHO05D002050 4.1e-08 62.8 197 31.0
PSO832G2469 Papaver somniferum HOM05D002065 ORTHO05D002050 9.2e-08 61.6 116 34.5
AUR62015648 Chenopodium quinoa HOM05D002065 ORTHO05D023830 1.6e-07 60.8 187 28.3
Psat5g251880 Pisum sativum HOM05D002065 ORTHO05D002050 1.6e-07 60.8 190 31.1
Lalb_Chr14g0366161 Lupinus albus HOM05D002065 ORTHO05D002050 2.0e-07 60.5 206 30.1
AUR62020551 Chenopodium quinoa HOM05D002065 ORTHO05D002050 2.7e-07 60.1 223 27.8
BcaB06g26126 Brassica carinata HOM05D002065 ORTHO05D002050 4.5e-07 59.3 200 29.0
Peaxi162Scf01086g00113 Petunia axillaris HOM05D002065 ORTHO05D002050 5.9e-07 58.9 139 31.7
Migut.M00324 Erythranthe guttata HOM05D002065 ORTHO05D002050 1.3e-06 57.8 210 28.6


User provided reference genes

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