Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G5298 Papaver somniferum HOM05D007550 ORTHO05D009474 4.4e-86 321.2 161 100.0
PSO675G9283 Papaver somniferum HOM05D007550 ORTHO05D009474 4.4e-86 321.2 161 100.0
TAR626G1551 Trochodendron aralioides HOM05D007550 ORTHO05D009474 1.3e-29 133.7 124 56.5
Aqoxy4G02213 Aquilegia oxysepala HOM05D007550 ORTHO05D009474 5.1e-26 121.7 137 48.9
Lj1A885G31 Lonicera japonica HOM05D007550 ORTHO05D009474 5.7e-25 118.2 108 58.3
Nn1g07439 Nelumbo nucifera HOM05D007550 ORTHO05D009474 3.4e-22 109.0 122 49.2
Migut.M01677 Erythranthe guttata HOM05D007550 ORTHO05D009474 1.0e-21 107.5 113 52.2
Dinv10312 Davidia involucrata HOM05D007550 ORTHO05D009474 6.5e-21 104.8 123 47.2
Oeu005969.1 Olea europaea HOM05D007550 ORTHO05D009474 6.5e-21 104.8 124 50.0
QL08p005510 Quercus lobata HOM05D007550 ORTHO05D009474 8.5e-21 104.4 77 64.9
GSVIVG01037778001 Vitis vinifera HOM05D007550 ORTHO05D009474 8.5e-21 104.4 84 58.3
Cfa020230 Carpinus fangiana HOM05D007550 ORTHO05D009474 1.4e-20 103.6 125 45.6
Phvul.008G275600 Phaseolus vulgaris HOM05D007550 ORTHO05D009474 1.9e-20 103.2 81 60.5
Atru.chr2.3607 Acer truncatum HOM05D007550 ORTHO05D009474 2.5e-20 102.8 73 67.1
Thhalv10014968m.g Eutrema salsugineum HOM05D007550 ORTHO05D009474 4.2e-20 102.1 80 62.5
BolC9t57498H Brassica oleracea HOM05D007550 ORTHO05D009474 5.5e-20 101.7 96 53.1
AT5G55570 Arabidopsis thaliana HOM05D007550 ORTHO05D009474 9.4e-20 100.9 73 63.0
ATR1149G080 Amborella trichopoda HOM05D007550 ORTHO05D009474 1.2e-19 100.5 61 75.4
CARHR268880 Cardamine hirsuta HOM05D007550 ORTHO05D009474 1.2e-19 100.5 80 58.8
Manes.15G063300 Manihot esculenta HOM05D007550 ORTHO05D009474 1.2e-19 100.5 117 50.4
C09p46340 Brassica napus HOM05D007550 ORTHO05D009474 1.6e-19 100.1 125 47.2
Glyma.14G015900 Glycine max HOM05D007550 ORTHO05D009474 1.6e-19 100.1 127 48.0
Medtr5g094600 Medicago truncatula HOM05D007550 ORTHO05D009474 1.6e-19 100.1 119 47.1
Peaxi162Scf00955g00219 Petunia axillaris HOM05D007550 ORTHO05D009474 1.6e-19 100.1 108 48.1
TWI38G1227 Tripterygium wilfordii HOM05D007550 ORTHO05D009474 1.6e-19 100.1 105 51.4
AL8G31140 Arabidopsis lyrata HOM05D007550 ORTHO05D009474 2.1e-19 99.8 77 61.0
Carub.0008s1594 Capsella rubella HOM05D007550 ORTHO05D009474 2.1e-19 99.8 77 61.0
Sc18g0004240 Simmondsia chinensis HOM05D007550 ORTHO05D009474 2.1e-19 99.8 73 64.4
Psat2g008720 Pisum sativum HOM05D007550 ORTHO05D009474 2.7e-19 99.4 84 54.8
Potri.011G085501 Populus trichocarpa HOM05D007550 ORTHO05D009474 3.6e-19 99.0 92 56.5
Solyc12g015630.2 Solanum lycopersicum HOM05D007550 ORTHO05D009474 3.6e-19 99.0 92 52.2
A10p12800 Brassica napus HOM05D007550 ORTHO05D009474 6.1e-19 98.2 125 46.4
BraA10t43373Z Brassica rapa HOM05D007550 ORTHO05D009474 6.1e-19 98.2 125 46.4
CiPaw.12G135900 Carya illinoinensis HOM05D007550 ORTHO05D009474 6.1e-19 98.2 85 58.8
Ciclev10009869m.g Citrus clementina HOM05D007550 ORTHO05D009474 6.1e-19 98.2 62 71.0
VMungo0647G1572 Vigna mungo HOM05D007550 ORTHO05D009474 6.1e-19 98.2 93 52.7
Actinidia39070 Actinidia chinensis HOM05D007550 ORTHO05D009474 7.9e-19 97.8 123 47.2
CDE06G2160 Ceratophyllum demersum HOM05D007550 ORTHO05D009474 1.0e-18 97.4 125 44.8
PGSC0003DMG400029800 Solanum tuberosum HOM05D007550 ORTHO05D009474 1.4e-18 97.1 94 50.0
ECA240G1453 Erigeron canadensis HOM05D007550 ORTHO05D009474 1.8e-18 96.7 72 62.5
unitig_899.g15275 Utricularia gibba HOM05D007550 ORTHO05D009474 2.3e-18 96.3 87 58.6
Aa31LG3G11520 Aethionema arabicum HOM05D007550 ORTHO05D009474 3.9e-18 95.5 86 57.0
Hma1.2p1_0036F.1_g022730 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 3.9e-18 95.5 71 63.4
CAN.G410.43 Capsicum annuum HOM05D007550 ORTHO05D009474 5.1e-18 95.1 75 61.3
LjContig00272g0022958 Lotus japonicus HOM05D007550 ORTHO05D009474 5.1e-18 95.1 74 62.2
Gorai.002G096500 Gossypium raimondii HOM05D007550 ORTHO05D009474 1.1e-17 94.0 120 44.2
Nitab4.5_0000163g0330 Nicotiana tabacum HOM05D007550 ORTHO05D009474 2.0e-17 93.2 110 47.3
ClCG10G004590 Citrullus lanatus HOM05D007550 ORTHO05D009474 2.6e-17 92.8 104 51.0
Sopen12g007530 Solanum pennellii HOM05D007550 ORTHO05D009474 2.6e-17 92.8 92 51.1
Gohir.D01G073600 Gossypium hirsutum HOM05D007550 ORTHO05D009474 3.3e-17 92.4 120 44.2
HanXRQChr13g0408011 Helianthus annuus HOM05D007550 ORTHO05D009474 3.3e-17 92.4 94 48.9
PGR031G0516 Punica granatum HOM05D007550 ORTHO05D009474 3.3e-17 92.4 60 66.7
MSTRG.6984 Avicennia marina HOM05D007550 ORTHO05D009474 4.4e-17 92.0 92 53.3
FAN25G3253 Fragaria x ananassa HOM05D007550 ORTHO05D009474 5.7e-17 91.7 128 42.2
THA.LOC104817699 Tarenaya hassleriana HOM05D007550 ORTHO05D009474 5.7e-17 91.7 92 52.2
MD11G1204800 Malus domestica HOM05D007550 ORTHO05D009474 9.7e-17 90.9 125 42.4
Duzib213G0332 Durio zibethinus HOM05D007550 ORTHO05D009474 1.3e-16 90.5 85 49.4
Gohir.A01G087300 Gossypium hirsutum HOM05D007550 ORTHO05D009474 1.3e-16 90.5 87 49.4
FAN25G1734 Fragaria x ananassa HOM05D007550 ORTHO05D009474 1.7e-16 90.1 128 41.4
FAN21G0016 Fragaria x ananassa HOM05D007550 ORTHO05D009474 2.2e-16 89.7 143 38.5
Cc05_g14670 Coffea canephora HOM05D007550 ORTHO05D009474 2.8e-16 89.4 73 57.5
Hma1.2p1_0036F.1_g022720 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 2.8e-16 89.4 103 46.6
Lalb_Chr17g0348791 Lupinus albus HOM05D007550 ORTHO05D009474 4.8e-16 88.6 73 58.9
MELO3C014132.2 Cucumis melo HOM05D007550 ORTHO05D009474 6.3e-16 88.2 70 61.4
DCAR_022604 Daucus carota HOM05D007550 ORTHO05D009474 6.3e-16 88.2 84 56.0
Thecc.07G022400 Theobroma cacao HOM05D007550 ORTHO05D009474 8.2e-16 87.8 74 54.1
Nitab4.5_0001750g0040 Nicotiana tabacum HOM05D007550 ORTHO05D009474 1.1e-15 87.4 92 51.1
CsaV3_3G004390 Cucumis sativus L. HOM05D007550 ORTHO05D009474 1.8e-15 86.7 99 48.5
SGA_v2.0_scaffold168G38530 Striga asiatica HOM05D007550 ORTHO05D009474 2.4e-15 86.3 105 43.8
RcHm_v2.0_Chr5g0042631 Rosa chinensis HOM05D007550 ORTHO05D009474 4.1e-15 85.5 136 39.0
AagrBONN_evm.TU.Sc2ySwM_344.2781 Anthoceros agrestis HOM05D007550 ORTHO05D009474 5.3e-15 85.1 87 50.6
COL.COLO4_09786 Corchorus olitorius HOM05D007550 ORTHO05D009474 5.3e-15 85.1 102 42.2
FAN16G0277 Fragaria x ananassa HOM05D007550 ORTHO05D009474 5.3e-15 85.1 119 41.2
Sed0001315 Sechium edule HOM05D007550 ORTHO05D009474 5.3e-15 85.1 80 53.8
FAN11G2859 Fragaria x ananassa HOM05D007550 ORTHO05D009474 9.1e-15 84.3 140 37.1
Sabra02G0058600 Salix brachista HOM05D007550 ORTHO05D009474 9.1e-15 84.3 92 51.1
Zm00001eb370450 Zea mays HOM05D007550 ORTHO05D009474 2.0e-14 83.2 59 64.4
FvH4_3g24050 Fragaria vesca HOM05D007550 ORTHO05D009474 2.6e-14 82.8 120 40.0
Os01g0762300 Oryza sativa ssp. japonica HOM05D007550 ORTHO05D009474 3.4e-14 82.4 55 61.8
HPP92_028367 Vanilla planifolia HOM05D007550 ORTHO05D009474 5.9e-14 81.6 85 48.2
Pp3c18_5680 Physcomitrium patens HOM05D007550 ORTHO05D009474 1.7e-13 80.1 80 50.0
Mapoly0128s0022 Marchantia polymorpha HOM05D007550 ORTHO05D009474 2.9e-13 79.3 74 52.7
BcaB08g35917 Brassica carinata HOM05D007550 ORTHO05D009474 1.4e-12 77.0 84 50.0
Ah.06g181190 Amaranthus hybridus HOM05D000063 ORTHO05D000906 3.2e-12 75.9 103 46.6
arahy.Tifrunner.gnm1.ann1.S0MYI4 Arachis hypogaea HOM05D007550 ORTHO05D009474 5.5e-12 75.1 84 47.6
CANSAT56G0742 Cannabis sativa HOM05D007550 ORTHO05D009474 5.5e-12 75.1 111 43.2
CBR_g30607 Chara braunii HOM05D007550 ORTHO05D009474 9.4e-12 74.3 56 55.4
arahy.Tifrunner.gnm1.ann1.R7ZLS4 Arachis hypogaea HOM05D007550 ORTHO05D009474 2.7e-11 72.8 127 35.4
MBI16_g11565_MAGBIO Magnolia biondii HOM05D007550 ORTHO05D009474 6.7e-10 68.2 97 48.5
vmacro09669 Vaccinium macrocarpon HOM05D007550 ORTHO05D009474 8.8e-10 67.8 71 57.7
Cre03.g145567 Chlamydomonas reinhardtii HOM05D007550 ORTHO05D009474 4.8e-08 62.0 74 45.9
Prupe.4G233900 Prunus persica HOM05D007550 ORTHO05D009474 1.8e-07 60.1 102 40.2
Sp6g17490 Schrenkiella parvula HOM05D007550 ORTHO05D009474 2.4e-07 59.7 54 57.4
Hund01919 Selenicereus undatus HOM05D007550 ORTHO05D009474 3.1e-07 59.3 74 48.6
EL10Ac4g07615 Beta vulgaris HOM05D007550 ORTHO05D009474 7.0e-07 58.2 111 36.0
Potri.011G085700 Populus trichocarpa HOM05D007550 ORTHO05D009474 7.0e-07 58.2 65 52.3


User provided reference genes

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