Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G5284 Papaver somniferum HOM05D004836 ORTHO05D005150 0.0e+00 3232.2 1819 100.0
PSO675G3612 Papaver somniferum HOM05D004836 ORTHO05D005150 0.0e+00 3095.1 1822 96.2
TAR626G1210 Trochodendron aralioides HOM05D004836 ORTHO05D005150 1.3e-122 446.0 2041 30.3
TAR624G0729 Trochodendron aralioides HOM05D004836 ORTHO05D005150 2.8e-88 332.0 1956 27.8
PSO063G5346 Papaver somniferum HOM05D004836 ORTHO05D005150 1.9e-84 319.3 376 70.7
Nn1g03169 Nelumbo nucifera HOM05D004836 ORTHO05D005150 8.3e-72 277.3 1949 26.9
MBI15_g03895_MAGBIO Magnolia biondii HOM05D004836 ORTHO05D005150 3.2e-55 222.2 1926 27.2
Dinv10337 Davidia involucrata HOM05D004836 ORTHO05D005150 2.9e-53 215.7 1937 26.1
Actinidia05002 Actinidia chinensis HOM05D004836 ORTHO05D005150 4.6e-46 191.8 1967 25.0
Aqoxy4G02292 Aquilegia oxysepala HOM05D004836 ORTHO05D005150 4.4e-41 175.3 1979 26.1
CiPaw.11G204300 Carya illinoinensis HOM05D004836 ORTHO05D005150 4.9e-40 171.8 2013 24.2
Haze_09829 Corylus avellana HOM05D004836 ORTHO05D005150 8.3e-40 171.0 2015 25.8
GSVIVG01014692001 Vitis vinifera HOM05D004836 ORTHO05D005150 3.5e-38 165.6 2006 26.0
Actinidia37154 Actinidia chinensis HOM05D004836 ORTHO05D005150 1.0e-37 164.1 1922 24.2
Dinv40862 Davidia involucrata HOM05D004836 ORTHO05D005150 4.3e-36 158.7 540 29.4
QL08p004015 Quercus lobata HOM05D004836 ORTHO05D005150 4.7e-35 155.2 2003 24.4
RcHm_v2.0_Chr1g0333641 Rosa chinensis HOM05D004836 ORTHO05D005150 5.8e-33 148.3 1942 23.7
MD03G1024600 Malus domestica HOM05D004836 ORTHO05D005150 3.2e-31 142.5 2005 24.3
PGR083G2228 Punica granatum HOM05D004836 ORTHO05D005150 7.3e-28 131.3 1902 23.3
Rhsim06G0230000 Rhododendron simsii HOM05D004836 ORTHO05D005150 4.0e-26 125.6 1991 23.5
CSS0029600 Camellia sinensis var. sinensis HOM05D004836 ORTHO05D005150 1.5e-25 123.6 638 26.2
Oeu014362.2 Olea europaea HOM05D004836 ORTHO05D005150 1.9e-23 116.7 1983 24.0
Prupe.7G022200 Prunus persica HOM05D004836 ORTHO05D005150 7.1e-23 114.8 2001 24.1
MD11G1029700 Malus domestica HOM05D004836 ORTHO05D005150 1.2e-22 114.0 2045 23.4
Manes.03G141700 Manihot esculenta HOM05D004836 ORTHO05D005150 7.8e-22 111.3 246 33.7
Eucgr.F02046 Eucalyptus grandis HOM05D004836 ORTHO05D005150 7.3e-20 104.8 243 32.1
Nitab4.5_0002736g0020 Nicotiana tabacum HOM05D004836 ORTHO05D005150 9.6e-20 104.4 251 35.1
Lsat_1_v5_gn_9_90560 Lactuca sativa HOM05D004836 ORTHO05D005150 1.6e-19 103.6 244 33.6
Nitab4.5_0007415g0020 Nicotiana tabacum HOM05D004836 ORTHO05D005150 1.6e-19 103.6 251 34.3
DCAR_013235 Daucus carota HOM05D004836 ORTHO05D005150 8.1e-19 101.3 260 32.7
Hund23108 Selenicereus undatus HOM05D004836 ORTHO05D005150 5.3e-18 98.6 523 28.3
TWI39G0173 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 1.5e-17 97.1 245 30.2
Sc16g0008100 Simmondsia chinensis HOM05D004836 ORTHO05D005150 5.8e-17 95.1 250 34.0
CDE02G4444 Ceratophyllum demersum HOM05D004836 ORTHO05D005150 7.6e-17 94.7 281 29.9
AUR62017108 Chenopodium quinoa HOM05D004836 ORTHO05D005150 7.6e-17 94.7 247 31.6
TWI38G0981 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 7.6e-17 94.7 764 31.2
Rhsim04G0012500 Rhododendron simsii HOM05D004836 ORTHO05D005150 9.9e-17 94.4 160 39.4
SGA_v2.0_scaffold171G38861 Striga asiatica HOM05D004836 ORTHO05D005150 1.3e-16 94.0 169 38.5
THA.LOC104811669 Tarenaya hassleriana HOM05D004836 ORTHO05D005150 3.8e-16 92.4 267 31.8
CAN.G623.12 Capsicum annuum HOM05D004836 ORTHO05D005150 8.4e-16 91.3 250 31.6
ATR0751G141 Amborella trichopoda HOM05D004836 ORTHO05D005150 1.1e-15 90.9 253 31.6
Gohir.D01G061900 Gossypium hirsutum HOM05D004836 ORTHO05D005150 1.1e-15 90.9 1986 24.8
EL10Ac4g07562 Beta vulgaris HOM05D004836 ORTHO05D005150 1.9e-15 90.1 154 40.9
SGA_v2.0_scaffold168G38564 Striga asiatica HOM05D004836 ORTHO05D005150 2.4e-15 89.7 163 36.8
Manes.15G059500 Manihot esculenta HOM05D004836 ORTHO05D005150 4.2e-15 89.0 246 30.5
HanXRQChr13g0408421 Helianthus annuus HOM05D004836 ORTHO05D005150 7.1e-15 88.2 543 26.2
Prupe.5G032900 Prunus persica HOM05D004836 ORTHO05D005150 7.1e-15 88.2 1995 22.7
AUR62044127 Chenopodium quinoa HOM05D004836 ORTHO05D005150 1.2e-14 87.4 506 25.3
Potri.001G368200 Populus trichocarpa HOM05D004836 ORTHO05D005150 1.2e-14 87.4 162 36.4
BcaB08g35940 Brassica carinata HOM05D004836 ORTHO05D005150 1.6e-14 87.0 261 29.1
Migut.M01650 Erythranthe guttata HOM05D004836 ORTHO05D005150 1.6e-14 87.0 1001 25.5
Carub.0008s1617 Capsella rubella HOM05D004836 ORTHO05D005150 2.1e-14 86.7 268 31.7
CDE04G0223 Ceratophyllum demersum HOM05D000588 ORTHO05D005150 2.1e-14 86.7 230 32.2
Sopen07g033810 Solanum pennellii HOM05D004836 ORTHO05D005150 2.1e-14 86.7 246 31.7
AUR62036461 Chenopodium quinoa HOM05D004836 ORTHO05D005150 2.7e-14 86.3 400 26.8
Sabra16G0241300 Salix brachista HOM05D004836 ORTHO05D005150 3.5e-14 85.9 499 24.2
Solyc07g065600.3 Solanum lycopersicum HOM05D004836 ORTHO05D005150 6.0e-14 85.1 246 31.3
Oeu046935.1 Olea europaea HOM05D004836 ORTHO05D005150 1.0e-13 84.3 1736 22.4
Peaxi162Scf00139g01321 Petunia axillaris HOM05D004836 ORTHO05D005150 1.0e-13 84.3 1705 21.2
Sp6g17700 Schrenkiella parvula HOM05D004836 ORTHO05D005150 1.0e-13 84.3 257 28.8
AT5G55820 Arabidopsis thaliana HOM05D004836 ORTHO05D005150 2.3e-13 83.2 102 44.1
Aa31LG3G11720 Aethionema arabicum HOM05D004836 ORTHO05D005150 3.0e-13 82.8 103 43.7
CANSAT35G0529 Cannabis sativa HOM05D004836 ORTHO05D005150 3.0e-13 82.8 655 29.2
CSS0003147 Camellia sinensis var. sinensis HOM05D004836 ORTHO05D005150 6.6e-13 81.6 357 27.5
AL8G31380 Arabidopsis lyrata HOM05D004836 ORTHO05D005150 8.7e-13 81.3 98 44.9
Cc05_g14960 Coffea canephora HOM05D004836 ORTHO05D005150 8.7e-13 81.3 1938 22.5
Hund20644 Selenicereus undatus HOM05D004836 ORTHO05D005150 1.1e-12 80.9 542 24.9
Ah.06g181450 Amaranthus hybridus HOM05D004836 ORTHO05D005150 1.5e-12 80.5 254 31.5
Lj1A890T51 Lonicera japonica HOM05D004836 ORTHO05D005150 1.5e-12 80.5 190 35.3
Actinidia30401 Actinidia chinensis HOM05D004836 ORTHO05D005150 1.9e-12 80.1 67 58.2
Gorai.002G100500 Gossypium raimondii HOM05D004836 ORTHO05D005150 2.5e-12 79.7 2017 23.6
PGSC0003DMG400022276 Solanum tuberosum HOM05D004836 ORTHO05D005150 5.6e-12 78.6 861 25.2
Atru.chr2.3693 Acer truncatum HOM05D004836 ORTHO05D005150 1.6e-11 77.0 82 45.1
CsaV3_7G011380 Cucumis sativus L. HOM05D004836 ORTHO05D005150 2.1e-11 76.6 246 28.9
unitig_22.g5946 Utricularia gibba HOM05D004836 ORTHO05D005150 2.8e-11 76.3 265 30.6
BcaC01g06394 Brassica carinata HOM05D004836 ORTHO05D005150 3.6e-11 75.9 257 28.8
C03p16240 Brassica napus HOM05D004836 ORTHO05D005150 3.6e-11 75.9 257 28.8
FAN03G2987 Fragaria x ananassa HOM05D004836 ORTHO05D005150 3.6e-11 75.9 2048 23.2
A03p13800 Brassica napus HOM05D004836 ORTHO05D005150 6.2e-11 75.1 267 28.8
BolC3t14046H Brassica oleracea HOM05D004836 ORTHO05D005150 6.2e-11 75.1 258 28.7
BraA03t10683Z Brassica rapa HOM05D004836 ORTHO05D005150 8.1e-11 74.7 267 28.8
MELO3C024947.2 Cucumis melo HOM05D004836 ORTHO05D005150 8.1e-11 74.7 464 25.2
ATR0712G030 Amborella trichopoda HOM05D004836 ORTHO05D005150 1.1e-10 74.3 86 46.5
CARHR269190 Cardamine hirsuta HOM05D004836 ORTHO05D005150 1.1e-10 74.3 259 30.5
Cpa.g.sc12.114 Carica papaya HOM05D004836 ORTHO05D005150 1.1e-10 74.3 606 25.6
Gohir.A13G132500 Gossypium hirsutum HOM05D004836 ORTHO05D005150 1.1e-10 74.3 82 48.8
Gorai.013G152400 Gossypium raimondii HOM05D004836 ORTHO05D005150 1.1e-10 74.3 82 48.8
COL.COLO4_09837 Corchorus olitorius HOM05D004836 ORTHO05D005150 1.4e-10 73.9 82 47.6
Medtr1g111660 Medicago truncatula HOM05D004836 ORTHO05D005150 1.4e-10 73.9 246 27.2
CANSAT11G1576 Cannabis sativa HOM05D004836 ORTHO05D005150 1.8e-10 73.6 183 31.1
Sc03g0011420 Simmondsia chinensis HOM05D004836 ORTHO05D005150 4.0e-10 72.4 1975 22.9
Thecc.07G013200 Theobroma cacao HOM05D004836 ORTHO05D005150 4.0e-10 72.4 1995 23.0
arahy.Tifrunner.gnm1.ann1.D5NCPP Arachis hypogaea HOM05D004836 ORTHO05D005150 5.3e-10 72.0 246 27.6
arahy.Tifrunner.gnm1.ann1.LI7RG4 Arachis hypogaea HOM05D004836 ORTHO05D005150 9.0e-10 71.2 246 27.6
arahy.Tifrunner.gnm1.ann1.TB163P Arachis hypogaea HOM05D004836 ORTHO05D005150 9.0e-10 71.2 246 27.6
Duzib213G0869 Durio zibethinus HOM05D004836 ORTHO05D005150 3.4e-09 69.3 1719 21.8
Psat6g230520 Pisum sativum HOM05D004836 ORTHO05D005150 9.9e-09 67.8 449 24.1
Thhalv10012421m.g Eutrema salsugineum HOM05D004836 ORTHO05D005150 2.2e-08 66.6 81 45.7
HanXRQChr03g0074021 Helianthus annuus HOM05D004836 ORTHO05D005150 6.4e-08 65.1 60 51.7
FvH4_7g06090 Fragaria vesca HOM05D004836 ORTHO05D005150 1.4e-07 63.9 1959 21.5
TPR.G26309 Trifolium pratense HOM05D004836 ORTHO05D005150 1.4e-07 63.9 246 24.0
FAN06G1091 Fragaria x ananassa HOM05D004836 ORTHO05D005150 2.4e-07 63.2 1958 21.3
Sed0002835 Sechium edule HOM05D004836 ORTHO05D005150 4.2e-07 62.4 244 28.3
FAN01G1635 Fragaria x ananassa HOM05D004836 ORTHO05D005150 5.5e-07 62.0 1958 21.6
Gohir.D13G135900 Gossypium hirsutum HOM05D004836 ORTHO05D005150 5.5e-07 62.0 541 34.8
Phvul.007G023800 Phaseolus vulgaris HOM05D004836 ORTHO05D005150 7.1e-07 61.6 134 34.3
TWI39G0854 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 7.1e-07 61.6 508 30.3
TPR.G26295 Trifolium pratense HOM05D004836 ORTHO05D005150 9.3e-07 61.2 129 32.6
Actinidia30399 Actinidia chinensis HOM05D004836 ORTHO05D005150 2.7e-06 59.7 69 47.8
Phvul.003G265300 Phaseolus vulgaris HOM05D004836 ORTHO05D005150 3.5e-06 59.3 134 33.6
BolC2t07687H Brassica oleracea HOM05D000026 ORTHO05D017167 4.6e-06 58.9 62 46.8
Lalb_Chr21g0309081 Lupinus albus HOM05D004836 ORTHO05D005150 4.6e-06 58.9 247 25.1
C02p15810 Brassica napus HOM05D004836 ORTHO05D017167 7.9e-06 58.2 62 46.8
SEGI_04158 Sequoiadendron giganteum HOM05D014698 ORTHO05D016532 7.9e-06 58.2 95 38.9


User provided reference genes

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