Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 8.7e-204 713.4 352 100.0
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 1.5e-195 686.0 352 96.0
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 1.7e-130 469.9 354 67.8
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 3.1e-124 449.1 346 66.2
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 5.2e-124 448.4 353 64.9
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 6.6e-119 431.4 352 63.1
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 1.9e-118 429.9 358 62.0
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 1.4e-116 423.7 339 63.1
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 1.8e-116 423.3 342 63.2
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 1.5e-115 420.2 350 60.9
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 2.0e-115 419.9 352 61.4
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 4.9e-114 415.2 350 61.4
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 6.4e-114 414.8 357 58.8
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 1.1e-113 414.1 341 62.8
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 3.2e-113 412.5 366 58.7
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 4.2e-113 412.1 336 63.4
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 6.0e-112 408.3 338 60.4
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 1.7e-111 406.8 355 60.0
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 1.1e-110 404.1 338 63.3
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 1.9e-110 403.3 371 57.4
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 4.3e-110 402.1 351 59.5
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 5.6e-110 401.7 341 62.2
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 5.6e-110 401.7 350 58.3
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 5.6e-110 401.7 357 57.4
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 5.6e-110 401.7 350 60.0
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 7.3e-110 401.4 350 58.3
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 9.6e-110 401.0 354 60.2
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 2.1e-109 399.8 347 59.9
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 3.6e-109 399.1 337 61.7
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 3.6e-109 399.1 257 70.4
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 4.8e-109 398.7 267 69.7
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 1.4e-108 397.1 355 58.9
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 2.4e-108 396.4 311 66.2
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 1.5e-107 393.7 265 69.1
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 7.6e-107 391.3 346 58.1
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 9.9e-107 391.0 242 75.6
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 9.9e-107 391.0 337 59.9
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 1.7e-106 390.2 269 69.9
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 1.7e-106 390.2 325 60.6
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 7.1e-105 384.8 321 61.4
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 9.3e-105 384.4 336 59.8
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 9.3e-105 384.4 264 68.6
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 3.5e-104 382.5 401 53.6
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 1.3e-103 380.6 355 58.3
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 2.3e-103 379.8 279 66.7
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 6.6e-103 378.3 336 58.0
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 8.7e-103 377.9 355 58.6
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 1.1e-102 377.5 289 64.0
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 4.3e-102 375.6 291 64.3
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 3.6e-101 372.5 353 56.9
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 1.4e-100 370.5 229 72.1
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 1.8e-100 370.2 274 63.9
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 4.0e-100 369.0 338 55.9
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 5.3e-100 368.6 330 57.9
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 2.6e-99 366.3 355 57.2
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 1.7e-98 363.6 356 54.2
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 6.4e-98 361.7 359 53.2
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 1.9e-97 360.1 342 55.0
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 7.1e-97 358.2 336 55.7
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 7.1e-97 358.2 360 53.3
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 2.1e-96 356.7 217 76.0
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 3.5e-96 355.9 358 52.2
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 6.0e-96 355.1 229 70.3
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 7.9e-96 354.8 346 52.6
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 1.3e-95 354.0 228 69.3
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 8.7e-95 351.3 356 52.2
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 1.1e-94 350.9 212 73.6
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 1.1e-94 350.9 341 54.0
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 1.5e-94 350.5 315 60.3
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 2.5e-94 349.7 337 54.0
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 2.5e-94 349.7 380 49.7
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 1.4e-92 344.0 225 73.3
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 5.3e-92 342.0 336 53.9
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 1.2e-91 340.9 268 60.8
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 1.2e-91 340.9 268 60.8
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 2.0e-91 340.1 287 57.5
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 3.4e-91 339.3 441 46.0
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 2.9e-90 336.3 346 52.0
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 3.8e-90 335.9 227 71.4
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 3.8e-90 335.9 352 53.4
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 1.1e-89 334.3 268 59.7
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 1.2e-88 330.9 202 77.2
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 6.7e-87 325.1 377 50.9
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 6.7e-87 325.1 377 50.9
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 8.2e-85 318.2 290 56.2
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 1.1e-84 317.8 217 69.1
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 1.1e-81 307.8 174 79.9
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 2.1e-80 303.5 200 69.5
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 3.9e-79 299.3 324 49.1
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 5.9e-75 285.4 351 48.7
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 1.3e-74 284.3 283 56.5
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 1.4e-73 280.8 222 57.2
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 7.4e-70 268.5 247 59.1
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 3.7e-69 266.2 294 49.7
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 4.8e-69 265.8 280 53.2
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.8e-68 263.8 257 58.0
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 3.1e-68 263.1 238 54.2
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 1.2e-67 261.2 218 55.0
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 3.2e-65 253.1 229 57.6
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 4.2e-65 252.7 258 53.9
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 6.1e-64 248.8 222 52.7
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 1.5e-62 244.2 282 51.1
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 7.4e-62 241.9 311 46.9
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 4.2e-49 199.5 236 44.1
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 2.5e-41 173.7 208 39.4
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 3.1e-36 156.8 177 52.5
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 8.6e-34 148.7 210 42.4
FAN05G5431 Fragaria x ananassa HOM05D006836 ORTHO05D008691 9.5e-33 145.2 104 63.5
FAN09G0369 Fragaria x ananassa HOM05D006836 ORTHO05D008691 8.0e-32 142.1 104 63.5
HPP92_003031 Vanilla planifolia HOM05D006836 ORTHO05D008691 4.6e-27 126.3 82 67.1
PRCOL_00003549 Prasinoderma coloniale HOM05D006836 ORTHO05D008691 3.5e-19 100.1 164 39.0
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 1.3e-13 81.6 47 74.5
Hma1.2p1_0599F.1_g187040 Hydrangea macrophylla HOM05D006836 ORTHO05D008691 1.7e-13 81.3 143 44.8
Haze_12595 Corylus avellana HOM05D006836 ORTHO05D008691 2.1e-08 64.3 48 58.3


User provided reference genes

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