Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G5001 Papaver somniferum HOM05D000625 ORTHO05D000467 3.6e-215 751.5 435 100.0
PSO675G7500 Papaver somniferum HOM05D000625 ORTHO05D000467 4.7e-191 671.4 434 91.7
MD10G1258400 Malus domestica HOM05D000625 ORTHO05D000467 2.9e-39 167.2 401 36.7
Aqoxy1G01660 Aquilegia oxysepala HOM05D000625 ORTHO05D000467 4.2e-38 163.3 405 38.5
TWI09G0936 Tripterygium wilfordii HOM05D000625 ORTHO05D000467 7.1e-38 162.5 388 36.1
Cfa000902 Carpinus fangiana HOM05D000625 ORTHO05D000467 6.6e-36 156.0 389 37.3
Actinidia13444 Actinidia chinensis HOM05D000625 ORTHO05D000467 1.5e-35 154.8 395 35.4
Prupe.4G085400 Prunus persica HOM05D000625 ORTHO05D000467 1.5e-35 154.8 408 37.5
Haze_05659 Corylus avellana HOM05D000625 ORTHO05D000467 4.3e-35 153.3 416 35.8
GSVIVG01021545001 Vitis vinifera HOM05D000625 ORTHO05D000467 4.3e-35 153.3 444 35.1
Ciclev10015036m.g Citrus clementina HOM05D000625 ORTHO05D000467 7.3e-35 152.5 414 33.8
Actinidia07465 Actinidia chinensis HOM05D000625 ORTHO05D000467 1.4e-33 148.3 403 34.5
VMungo1309G1421 Vigna mungo HOM05D000625 ORTHO05D000467 1.4e-33 148.3 404 35.6
QL05p055155 Quercus lobata HOM05D000625 ORTHO05D000467 1.8e-33 147.9 419 34.8
TWI73G1040 Tripterygium wilfordii HOM05D000625 ORTHO05D000467 1.8e-33 147.9 391 33.8
TAR629G2522 Trochodendron aralioides HOM05D000625 ORTHO05D000467 4.0e-33 146.7 408 35.3
Dinv32215 Davidia involucrata HOM05D000625 ORTHO05D000467 5.3e-33 146.4 393 37.9
TAR626G1770 Trochodendron aralioides HOM05D000625 ORTHO05D000467 1.5e-32 144.8 409 35.7
TAR704G0001 Trochodendron aralioides HOM05D000625 ORTHO05D000467 1.5e-32 144.8 427 34.4
ClCG01G024870 Citrullus lanatus HOM05D000625 ORTHO05D000467 2.6e-32 144.1 389 36.5
Nn3g20338 Nelumbo nucifera HOM05D000625 ORTHO05D000467 4.4e-32 143.3 402 34.8
Rhsim13G0117200 Rhododendron simsii HOM05D000625 ORTHO05D000467 5.8e-32 142.9 396 34.3
MD05G1279900 Malus domestica HOM05D000625 ORTHO05D000467 2.2e-31 141.0 433 33.3
Nn4g26634 Nelumbo nucifera HOM05D000625 ORTHO05D000467 2.9e-31 140.6 344 36.6
Phvul.009G213200 Phaseolus vulgaris HOM05D000625 ORTHO05D000467 1.4e-30 138.3 402 34.8
vmacro03434 Vaccinium macrocarpon HOM05D000625 ORTHO05D000467 1.9e-30 137.9 419 33.7
FvH4_3g05060 Fragaria vesca HOM05D000625 ORTHO05D000467 4.2e-30 136.7 422 34.6
Hma1.2p1_0594F.1_g185990 Hydrangea macrophylla HOM05D000625 ORTHO05D000467 4.2e-30 136.7 409 34.7
arahy.Tifrunner.gnm1.ann1.G0QL0C Arachis hypogaea HOM05D000625 ORTHO05D000467 5.4e-30 136.3 388 35.6
Dinv21525 Davidia involucrata HOM05D000625 ORTHO05D000467 9.3e-30 135.6 411 34.8
Glyma.09G089500 Glycine max HOM05D000625 ORTHO05D000467 4.6e-29 133.3 412 34.0
FAN25G3819 Fragaria x ananassa HOM05D000625 ORTHO05D000467 7.9e-29 132.5 425 33.9
Cc03_g08810 Coffea canephora HOM05D000625 ORTHO05D000467 1.3e-28 131.7 412 33.5
Atru.chr10.1090 Acer truncatum HOM05D000625 ORTHO05D000467 2.3e-28 131.0 383 34.5
FAN21G0939 Fragaria x ananassa HOM05D000625 ORTHO05D000467 3.0e-28 130.6 462 32.9
Manes.17G074100 Manihot esculenta HOM05D000625 ORTHO05D000467 3.0e-28 130.6 411 33.8
PGR083G0357 Punica granatum HOM05D000625 ORTHO05D000467 3.0e-28 130.6 398 32.7
FAN11G1753 Fragaria x ananassa HOM05D000625 ORTHO05D000467 3.9e-28 130.2 431 33.6
CiPaw.09G119900 Carya illinoinensis HOM05D000625 ORTHO05D000467 5.1e-28 129.8 347 35.2
Thecc.06G144600 Theobroma cacao HOM05D000625 ORTHO05D000467 8.7e-28 129.0 416 33.9
Potri.011G081500 Populus trichocarpa HOM05D000625 ORTHO05D000467 1.1e-27 128.6 389 35.0
Glyma.15G197100 Glycine max HOM05D000625 ORTHO05D000467 1.9e-27 127.9 416 33.9
MBI18_g11222_MAGBIO Magnolia biondii HOM05D000625 ORTHO05D000467 2.5e-27 127.5 404 32.7
FAN16G3061 Fragaria x ananassa HOM05D000625 ORTHO05D000467 4.3e-27 126.7 451 32.6
Gohir.D05G148800 Gossypium hirsutum HOM05D000625 ORTHO05D000467 4.3e-27 126.7 393 34.9
Peaxi162Scf00465g00819 Petunia axillaris HOM05D000625 ORTHO05D000467 5.6e-27 126.3 339 36.0
MELO3C007108.2 Cucumis melo HOM05D000625 ORTHO05D000467 7.3e-27 125.9 410 34.6
RcHm_v2.0_Chr5g0014901 Rosa chinensis HOM05D000625 ORTHO05D000467 7.3e-27 125.9 352 36.4
Sed0014179 Sechium edule HOM05D000625 ORTHO05D000467 7.3e-27 125.9 388 34.8
Lj4g0003152 Lotus japonicus HOM05D000625 ORTHO05D000467 9.6e-27 125.6 407 33.4
CsaV3_6G051990 Cucumis sativus L. HOM05D000625 ORTHO05D000467 2.1e-26 124.4 411 34.3
Lj6g0026443 Lotus japonicus HOM05D000625 ORTHO05D000467 2.8e-26 124.0 397 34.3
Glyma.08G099600 Glycine max HOM05D000625 ORTHO05D000467 6.2e-26 122.9 346 35.0
Manes.15G124900 Manihot esculenta HOM05D000625 ORTHO05D000467 6.2e-26 122.9 392 32.9
arahy.Tifrunner.gnm1.ann1.W5QJNA Arachis hypogaea HOM05D000625 ORTHO05D000467 1.1e-25 122.1 389 34.2
Gohir.A05G146400 Gossypium hirsutum HOM05D000625 ORTHO05D000467 1.1e-25 122.1 393 34.4
MSTRG.16264 Avicennia marina HOM05D000625 ORTHO05D000467 1.8e-25 121.3 441 30.2
Medtr2g049770 Medicago truncatula HOM05D000625 ORTHO05D000467 2.4e-25 120.9 387 33.9
Gorai.009G152900 Gossypium raimondii HOM05D000625 ORTHO05D000467 6.9e-25 119.4 395 34.4
Sabra04G0085000 Salix brachista HOM05D000625 ORTHO05D000467 6.9e-25 119.4 391 32.2
Duzib235G0761 Durio zibethinus HOM05D000625 ORTHO05D000467 9.0e-25 119.0 446 31.4
Nitab4.5_0004752g0010 Nicotiana tabacum HOM05D000625 ORTHO05D000467 2.0e-24 117.9 430 31.2
Glyma.05G143200 Glycine max HOM05D000625 ORTHO05D000467 5.8e-24 116.3 403 32.0
VMungo0251G1602 Vigna mungo HOM05D000625 ORTHO05D000467 9.9e-24 115.5 351 32.5
Glyma.08G231500 Glycine max HOM05D000625 ORTHO05D000467 2.2e-23 114.4 346 35.0
Nitab4.5_0001930g0030 Nicotiana tabacum HOM05D000625 ORTHO05D000467 2.2e-23 114.4 429 31.7
COL.COLO4_31012 Corchorus olitorius HOM05D000625 ORTHO05D000467 3.8e-23 113.6 363 33.3
Duzib160G0084 Durio zibethinus HOM05D000625 ORTHO05D000467 8.4e-23 112.5 394 32.5
ClCG03G006510 Citrullus lanatus HOM05D000625 ORTHO05D000467 1.4e-22 111.7 430 28.8
arahy.Tifrunner.gnm1.ann1.J3VXKJ Arachis hypogaea HOM05D000625 ORTHO05D000467 1.9e-22 111.3 380 33.2
Migut.M00882 Erythranthe guttata HOM05D000625 ORTHO05D000467 1.9e-22 111.3 447 29.5
arahy.Tifrunner.gnm1.ann1.FF7LJT Arachis hypogaea HOM05D000625 ORTHO05D000467 2.4e-22 110.9 377 32.9
arahy.Tifrunner.gnm1.ann1.RJ5V20 Arachis hypogaea HOM05D000625 ORTHO05D000467 2.4e-22 110.9 377 32.9
ECA236G4706 Erigeron canadensis HOM05D000625 ORTHO05D000467 4.2e-22 110.2 341 33.1
Ca_18161_v3 Cicer arietinum L. HOM05D000625 ORTHO05D000467 7.1e-22 109.4 350 34.0
DCAR_004817 Daucus carota HOM05D000625 ORTHO05D000467 9.3e-22 109.0 417 31.4
Phvul.002G178100 Phaseolus vulgaris HOM05D000625 ORTHO05D000467 9.3e-22 109.0 351 33.3
Sabra11G0065200 Salix brachista HOM05D000625 ORTHO05D000467 1.2e-21 108.6 391 31.2
Cpa.g.sc17.48 Carica papaya HOM05D000625 ORTHO05D000467 2.7e-21 107.5 384 32.0
MSTRG.7510 Avicennia marina HOM05D000625 ORTHO05D000467 6.0e-21 106.3 426 31.2
Lalb_Chr23g0275921 Lupinus albus HOM05D000625 ORTHO05D000467 6.0e-21 106.3 413 29.8
Eucgr.D00271 Eucalyptus grandis HOM05D000625 ORTHO05D000467 1.0e-20 105.5 387 35.7
Sc17g0004800 Simmondsia chinensis HOM05D000625 ORTHO05D000467 1.0e-20 105.5 390 31.0
CDE05G1731 Ceratophyllum demersum HOM05D000625 ORTHO05D000467 1.3e-20 105.1 383 30.3
Duzib192G0574 Durio zibethinus HOM05D000625 ORTHO05D000467 1.3e-20 105.1 391 32.7
Lalb_Chr07g0187501 Lupinus albus HOM05D000625 ORTHO05D000467 1.3e-20 105.1 415 30.4
TPR.G31226 Trifolium pratense HOM05D000625 ORTHO05D000467 2.3e-20 104.4 404 30.7
MELO3C002769.2 Cucumis melo HOM05D000625 ORTHO05D000467 5.1e-20 103.2 379 30.9
THA.LOC104820660 Tarenaya hassleriana HOM05D000625 ORTHO05D000467 5.1e-20 103.2 391 29.9
SalBow8G3181 Salvia bowleyana HOM05D000625 ORTHO05D000467 8.7e-20 102.4 404 31.2
Psat1g020720 Pisum sativum HOM05D000625 ORTHO05D000467 1.1e-19 102.1 389 31.4
Psat7g080520 Pisum sativum HOM05D000625 ORTHO05D000467 1.5e-19 101.7 355 34.1
Oeu030961.1 Olea europaea HOM05D000625 ORTHO05D000467 1.9e-19 101.3 418 29.4
Gohir.A06G196200 Gossypium hirsutum HOM05D000625 ORTHO05D000467 2.5e-19 100.9 363 30.9
Lsat_1_v5_gn_7_27500 Lactuca sativa HOM05D000625 ORTHO05D000467 2.5e-19 100.9 409 30.1
Sp1g26120 Schrenkiella parvula HOM05D000625 ORTHO05D000467 7.4e-19 99.4 411 31.4
Sed0010534 Sechium edule HOM05D000625 ORTHO05D000467 7.4e-19 99.4 347 33.4
CARHR029670 Cardamine hirsuta HOM05D000625 ORTHO05D000467 2.1e-18 97.8 407 29.7
Aa31LG6G5480 Aethionema arabicum HOM05D000625 ORTHO05D000467 2.8e-18 97.4 337 32.0
ATR1098G052 Amborella trichopoda HOM05D000625 ORTHO05D000467 6.2e-18 96.3 344 33.4
MSTRG.14786 Avicennia marina HOM05D000625 ORTHO05D000467 6.2e-18 96.3 459 31.2
Gohir.D06G203700 Gossypium hirsutum HOM05D000625 ORTHO05D000467 6.2e-18 96.3 363 30.3
Gorai.010G237600 Gossypium raimondii HOM05D000625 ORTHO05D000467 6.2e-18 96.3 384 30.2
TPR.G9564 Trifolium pratense HOM05D000625 ORTHO05D000467 1.1e-17 95.5 329 33.7
HPP92_028168 Vanilla planifolia HOM05D005567 ORTHO05D005651 1.4e-17 95.1 357 29.7
Carub.0001s2851 Capsella rubella HOM05D000625 ORTHO05D000467 1.8e-17 94.7 412 30.1
BcaB03g12207 Brassica carinata HOM05D000625 ORTHO05D000467 3.1e-17 94.0 407 29.2
HanXRQChr04g0116591 Helianthus annuus HOM05D000625 ORTHO05D000467 3.1e-17 94.0 404 30.7
Medtr8g079472 Medicago truncatula HOM05D000625 ORTHO05D000467 6.9e-17 92.8 327 34.3
C03p76620 Brassica napus HOM05D000625 ORTHO05D000467 3.4e-16 90.5 405 29.9
Ca_02598_v3 Cicer arietinum L. HOM05D000625 ORTHO05D000467 1.3e-15 88.6 389 31.4
Sed0027919 Sechium edule HOM05D000625 ORTHO05D000467 1.4e-14 85.1 343 30.9
A09p36210 Brassica napus HOM05D000625 ORTHO05D000467 1.2e-13 82.0 397 29.2
BcaB03g13837 Brassica carinata HOM05D000625 ORTHO05D000467 2.1e-13 81.3 349 32.1
BraA09t39148Z Brassica rapa HOM05D000625 ORTHO05D000467 2.7e-13 80.9 400 29.0
CDE02G0202 Ceratophyllum demersum HOM05D000625 ORTHO05D000467 4.6e-13 80.1 384 26.3
A07p09990 Brassica napus HOM05D000625 ORTHO05D000467 6.0e-13 79.7 351 30.5
BraA07t28791Z Brassica rapa HOM05D000625 ORTHO05D000467 6.0e-13 79.7 351 30.5
EL10Ac8g19628 Beta vulgaris HOM05D000625 ORTHO05D000467 1.8e-12 78.2 345 30.4
DCAR_003894 Daucus carota HOM05D000625 ORTHO05D000467 5.1e-12 76.6 376 27.7
unitig_37.g12090 Utricularia gibba HOM05D000625 ORTHO05D000467 5.1e-12 76.6 381 28.9
SGA_v2.0_scaffold106G30658 Striga asiatica HOM05D000625 ORTHO05D000467 1.1e-11 75.5 390 27.9
AT1G30280 Arabidopsis thaliana HOM05D000625 ORTHO05D000467 1.5e-11 75.1 408 27.7
BcaC01g00181 Brassica carinata HOM05D000625 ORTHO05D000467 4.3e-11 73.6 402 26.9
BolC3t19921H Brassica oleracea HOM05D000625 ORTHO05D000467 4.3e-11 73.6 402 26.9
AUR62002681 Chenopodium quinoa HOM05D000625 ORTHO05D000467 5.7e-11 73.2 351 29.3
Lj2C322G11 Lonicera japonica HOM05D000625 ORTHO05D000467 3.7e-10 70.5 210 30.5
Thhalv10007605m.g Eutrema salsugineum HOM05D000625 ORTHO05D000467 8.2e-10 69.3 413 27.6
AUR62030136 Chenopodium quinoa HOM05D000625 ORTHO05D000467 1.1e-09 68.9 231 31.2
AL1G44230 Arabidopsis lyrata HOM05D000625 ORTHO05D000467 1.4e-09 68.6 408 27.0
A08p24540 Brassica napus HOM05D000625 ORTHO05D000467 1.8e-09 68.2 402 25.6
Haze_05667 Corylus avellana HOM05D000625 ORTHO05D000467 2.4e-09 67.8 415 27.7
Hund21551 Selenicereus undatus HOM05D000625 ORTHO05D000467 2.4e-09 67.8 393 27.0
BraA08t34410Z Brassica rapa HOM05D000625 ORTHO05D000467 4.1e-09 67.0 402 26.1
SGA_v2.0_scaffold223G42823 Striga asiatica HOM05D000625 ORTHO05D000467 5.3e-09 66.6 190 30.5
CANSAT35G1452 Cannabis sativa HOM05D000625 ORTHO05D000467 9.0e-09 65.9 457 26.3
BcaB07g32627 Brassica carinata HOM05D000625 ORTHO05D000467 2.6e-08 64.3 426 27.5
C07p15270 Brassica napus HOM05D000625 ORTHO05D000467 2.9e-07 60.8 347 29.1
BcaC05g27057 Brassica carinata HOM05D000625 ORTHO05D000467 3.8e-07 60.5 141 31.2
Migut.H01348 Erythranthe guttata HOM05D000625 ORTHO05D000467 3.8e-07 60.5 333 28.2
Zm00001eb224630 Zea mays HOM05D041917 ORTHO05D037240 8.4e-07 59.3 210 29.0
BolC5t31645H Brassica oleracea HOM05D000625 ORTHO05D000467 1.1e-06 58.9 394 25.1
BcaC06g35499 Brassica carinata HOM05D000625 ORTHO05D000467 5.5e-06 56.6 353 30.3
BolC7t42030H Brassica oleracea HOM05D000625 ORTHO05D000467 5.5e-06 56.6 353 30.3
C05p29150 Brassica napus HOM05D000625 ORTHO05D000467 7.2e-06 56.2 168 28.6


User provided reference genes

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