Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G4911 Papaver somniferum HOM05D007451 ORTHO05D009399 2.3e-106 389.0 215 100.0
PSO675G9053 Papaver somniferum HOM05D007451 ORTHO05D009399 3.6e-99 365.2 209 96.7
TAR624G0819 Trochodendron aralioides HOM05D007451 ORTHO05D009399 3.3e-60 235.7 216 63.9
MBI07_g23439_MAGBIO Magnolia biondii HOM05D007451 ORTHO05D009399 7.3e-52 208.0 210 56.7
Potri.004G132600 Populus trichocarpa HOM05D007451 ORTHO05D009399 1.6e-51 206.8 214 57.0
Aqoxy1G01697 Aquilegia oxysepala HOM05D007451 ORTHO05D009399 4.7e-51 205.3 206 58.3
GSVIVG01021497001 Vitis vinifera HOM05D007451 ORTHO05D009399 1.5e-49 200.3 210 56.7
Manes.17G070400 Manihot esculenta HOM05D007451 ORTHO05D009399 3.7e-48 195.7 214 53.7
CiPaw.10G091600 Carya illinoinensis HOM05D007451 ORTHO05D009399 3.3e-44 182.6 204 52.5
RcHm_v2.0_Chr5g0014241 Rosa chinensis HOM05D007451 ORTHO05D009399 1.1e-42 177.6 199 51.3
TWI73G0492 Tripterygium wilfordii HOM05D007451 ORTHO05D009399 6.8e-42 174.9 212 50.5
ECA246G3905 Erigeron canadensis HOM05D007451 ORTHO05D009399 1.2e-41 174.1 209 48.3
Thecc.06G150100 Theobroma cacao HOM05D007451 ORTHO05D009399 1.2e-41 174.1 214 47.7
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 1.5e-41 173.7 200 50.0
Nn4g26566 Nelumbo nucifera HOM05D007451 ORTHO05D009399 1.5e-41 173.7 209 51.2
FAN21G0862 Fragaria x ananassa HOM05D007451 ORTHO05D009399 3.7e-40 169.1 218 48.6
Lj1C1189G10 Lonicera japonica HOM05D007451 ORTHO05D009399 3.7e-40 169.1 204 49.0
Oeu031273.1 Olea europaea HOM05D007451 ORTHO05D009399 4.9e-40 168.7 211 48.3
CANSAT35G1195 Cannabis sativa HOM05D007451 ORTHO05D009399 1.4e-39 167.2 198 49.0
Ciclev10018276m.g Citrus clementina HOM05D007451 ORTHO05D009399 7.1e-39 164.9 202 50.0
Rhsim02G0158600 Rhododendron simsii HOM05D007451 ORTHO05D009399 2.1e-38 163.3 234 44.9
Medtr4g084470 Medicago truncatula HOM05D007451 ORTHO05D009399 1.3e-37 160.6 198 46.0
arahy.Tifrunner.gnm1.ann1.ZU2BT9 Arachis hypogaea HOM05D007451 ORTHO05D009399 5.1e-37 158.7 209 45.0
HanXRQChr04g0114281 Helianthus annuus HOM05D007451 ORTHO05D009399 5.1e-37 158.7 210 45.7
Sc17g0004890 Simmondsia chinensis HOM05D007451 ORTHO05D009399 1.9e-36 156.8 198 48.5
Sabra04G0085400 Salix brachista HOM05D007451 ORTHO05D009399 2.5e-36 156.4 201 49.3
Lsat_1_v5_gn_7_28421 Lactuca sativa HOM05D007451 ORTHO05D009399 3.3e-36 156.0 210 45.2
Nitab4.5_0003044g0100 Nicotiana tabacum HOM05D007451 ORTHO05D009399 1.2e-35 154.1 210 44.8
Prupe.4G081100 Prunus persica HOM05D007451 ORTHO05D009399 1.2e-35 154.1 213 45.1
Cfa000938 Carpinus fangiana HOM05D007451 ORTHO05D009399 6.2e-35 151.8 200 50.5
Actinidia07699 Actinidia chinensis HOM05D007451 ORTHO05D009399 8.1e-35 151.4 209 45.5
Psat7g130000 Pisum sativum HOM05D007451 ORTHO05D009399 3.1e-34 149.4 198 45.5
FAN11G0575 Fragaria x ananassa HOM05D007451 ORTHO05D009399 6.8e-34 148.3 196 45.9
MD05G1283500 Malus domestica HOM05D007451 ORTHO05D009399 1.2e-33 147.5 197 46.7
arahy.Tifrunner.gnm1.ann1.Z8IVUX Arachis hypogaea HOM05D007451 ORTHO05D009399 1.5e-33 147.1 230 40.9
Hma1.2p1_0286F.1_g114180 Hydrangea macrophylla HOM05D007451 ORTHO05D009399 7.6e-33 144.8 213 44.6
VMungo0251G0908 Vigna mungo HOM05D007451 ORTHO05D009399 8.4e-32 141.4 212 42.9
Phvul.002G096800 Phaseolus vulgaris HOM05D007451 ORTHO05D009399 1.4e-31 140.6 209 41.6
CAN.G65.121 Capsicum annuum HOM05D007451 ORTHO05D009399 4.1e-31 139.0 209 43.1
CSS0045800 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 9.2e-31 137.9 197 44.7
Gohir.D10G042000 Gossypium hirsutum HOM05D007451 ORTHO05D009399 3.5e-30 136.0 215 42.8
Gorai.011G044600 Gossypium raimondii HOM05D007451 ORTHO05D009399 3.5e-30 136.0 215 42.8
Carub.0004s1625 Capsella rubella HOM05D007451 ORTHO05D009399 4.6e-30 135.6 160 48.1
EL10Ac8g19670 Beta vulgaris HOM05D007451 ORTHO05D009399 7.8e-30 134.8 198 43.9
EL10Ac8g19669 Beta vulgaris HOM05D007451 ORTHO05D009399 3.0e-29 132.9 198 43.9
BcaC02g11529 Brassica carinata HOM05D007451 ORTHO05D009399 8.6e-29 131.3 160 46.9
QL05p057933 Quercus lobata HOM05D007451 ORTHO05D009399 1.1e-28 131.0 219 41.6
AL4G30550 Arabidopsis lyrata HOM05D007451 ORTHO05D009399 2.5e-28 129.8 160 47.5
Nitab4.5_0003838g0080 Nicotiana tabacum HOM05D007451 ORTHO05D009399 2.5e-28 129.8 209 40.7
AT2G34580 Arabidopsis thaliana HOM05D007451 ORTHO05D009399 3.3e-28 129.4 160 47.5
Sp4g16840 Schrenkiella parvula HOM05D007451 ORTHO05D009399 1.2e-27 127.5 160 46.9
CSS0015635 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 3.6e-27 125.9 218 42.2
Thhalv10017344m.g Eutrema salsugineum HOM05D007451 ORTHO05D009399 6.2e-27 125.2 160 46.2
BcaB02g09525 Brassica carinata HOM05D007451 ORTHO05D009399 1.4e-26 124.0 160 45.0
CARHR128670 Cardamine hirsuta HOM05D007451 ORTHO05D009399 1.8e-26 123.6 160 45.6
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 1.2e-25 120.9 178 43.8
TPR.G38261 Trifolium pratense HOM05D007451 ORTHO05D009399 2.0e-25 120.2 144 45.8
FvH4_3g05500 Fragaria vesca HOM05D007451 ORTHO05D009399 7.6e-25 118.2 199 39.2
Lj4g0011610 Lotus japonicus HOM05D007451 ORTHO05D009399 3.8e-24 115.9 164 39.6
Gohir.A10G041200 Gossypium hirsutum HOM05D007451 ORTHO05D009399 4.9e-24 115.5 189 40.2
BraA05t20052Z Brassica rapa HOM05D007451 ORTHO05D009399 8.4e-24 114.8 188 39.4
Gorai.008G053800 Gossypium raimondii HOM05D007451 ORTHO05D009399 3.2e-23 112.8 202 40.1
Lalb_Chr16g0385141 Lupinus albus HOM05D007451 ORTHO05D009399 7.1e-23 111.7 204 37.7
Eucgr.E03355 Eucalyptus grandis HOM05D007451 ORTHO05D009399 2.7e-22 109.8 151 45.0
vmacro10960 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 6.0e-22 108.6 122 50.8
Haze_05609 Corylus avellana HOM05D007451 ORTHO05D009399 1.3e-21 107.5 128 51.6
Glyma.20G018400 Glycine max HOM05D007451 ORTHO05D009399 1.3e-21 107.5 144 43.8
Glyma.07G220100 Glycine max HOM05D007451 ORTHO05D009399 2.3e-21 106.7 209 35.4
THA.LOC104814695 Tarenaya hassleriana HOM05D007451 ORTHO05D009399 5.1e-21 105.5 186 39.2
AUR62030193 Chenopodium quinoa HOM05D007451 ORTHO05D009399 6.6e-21 105.1 198 39.9
AUR62002741 Chenopodium quinoa HOM05D007451 ORTHO05D009399 1.5e-20 104.0 198 39.4
AUR62002733 Chenopodium quinoa HOM05D007451 ORTHO05D009399 7.3e-20 101.7 198 38.9
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 1.1e-18 97.8 134 40.3
Cc10_g10170 Coffea canephora HOM05D007451 ORTHO05D009399 1.1e-18 97.8 148 43.2
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 1.4e-18 97.4 152 37.5
DCAR_003911 Daucus carota HOM05D007451 ORTHO05D009399 3.1e-18 96.3 107 52.3
Dinv32247 Davidia involucrata HOM05D007451 ORTHO05D009399 1.5e-17 94.0 158 39.9
Eucgr.B02066 Eucalyptus grandis HOM05D007451 ORTHO05D009399 4.5e-17 92.4 144 41.0
Peaxi162Scf00443g00210 Petunia axillaris HOM05D007451 ORTHO05D009399 7.6e-17 91.7 119 45.4
Zm00001eb204550 Zea mays HOM05D007451 ORTHO05D009399 3.8e-16 89.4 204 35.3
CDE02G3067 Ceratophyllum demersum HOM05D007451 ORTHO05D009399 7.1e-15 85.1 122 41.0
Eucgr.I02284 Eucalyptus grandis HOM05D007451 ORTHO05D009399 7.9e-14 81.6 172 36.6
BolC4t27857H Brassica oleracea HOM05D007451 ORTHO05D009399 1.0e-13 81.3 99 47.5
Duzib192G0695 Durio zibethinus HOM05D007451 ORTHO05D009399 1.3e-13 80.9 144 39.6
Gohir.D12G050550 Gossypium hirsutum HOM05D007451 ORTHO05D009399 3.9e-13 79.3 142 38.7
Gorai.004G185100 Gossypium raimondii HOM05D007451 ORTHO05D009399 5.1e-13 79.0 142 39.4
Gohir.D12G174800 Gossypium hirsutum HOM05D007451 ORTHO05D009399 4.8e-11 72.4 136 38.2
MBI06_g46402_MAGBIO Magnolia biondii HOM05D000482 ORTHO05D000349 6.2e-11 72.0 107 43.9
arahy.Tifrunner.gnm1.ann1.WBAN0Y Arachis hypogaea HOM05D007451 ORTHO05D009399 6.9e-10 68.6 119 36.1
C04p14410 Brassica napus HOM05D007451 ORTHO05D009399 3.4e-09 66.2 130 33.1
Eucgr.H02213 Eucalyptus grandis HOM05D007451 ORTHO05D009399 4.5e-09 65.9 89 44.9
AagrBONN_evm.TU.Sc2ySwM_228.4815 Anthoceros agrestis HOM05D007451 ORTHO05D009399 2.2e-08 63.5 150 30.7
BolC4t23024H Brassica oleracea HOM05D007451 ORTHO05D009399 1.4e-07 60.8 73 45.2
MBI06_g26106_MAGBIO Magnolia biondii HOM05D007451 ORTHO05D009399 9.3e-07 58.2 62 51.6
Eucgr.C02335 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.2e-06 57.8 73 46.6
Ah.16g109120 Amaranthus hybridus HOM05D007451 ORTHO05D009399 7.9e-06 55.1 111 36.9
Eucgr.J01485 Eucalyptus grandis HOM05D007451 ORTHO05D009399 7.9e-06 55.1 96 36.5


User provided reference genes

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