Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G4772 Papaver somniferum HOM05D007035 ORTHO05D008774 8.0e-120 433.7 212 100.0
PSO675G7652 Papaver somniferum HOM05D007035 ORTHO05D008774 8.9e-119 430.3 212 99.1
TAR628G1604 Trochodendron aralioides HOM05D007035 ORTHO05D008774 8.4e-85 317.4 208 73.1
Atru.chr3.931 Acer truncatum HOM05D007035 ORTHO05D008774 1.0e-82 310.5 206 72.3
Thecc.01G009700 Theobroma cacao HOM05D007035 ORTHO05D008774 9.6e-81 303.9 205 70.7
Nn6g31845 Nelumbo nucifera HOM05D007035 ORTHO05D008774 1.8e-79 299.7 206 71.8
CiPaw.07G005600 Carya illinoinensis HOM05D007035 ORTHO05D008774 1.2e-78 297.0 204 71.1
Cfa015701 Carpinus fangiana HOM05D007035 ORTHO05D008774 1.5e-78 296.6 202 71.8
Gohir.A02G175400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 5.8e-78 294.7 205 66.8
Manes.02G111400 Manihot esculenta HOM05D007035 ORTHO05D008774 7.6e-78 294.3 206 68.4
Rhsim08G0078500 Rhododendron simsii HOM05D007035 ORTHO05D008774 1.7e-77 293.1 206 70.4
QL06p052348 Quercus lobata HOM05D007035 ORTHO05D008774 2.2e-77 292.7 205 69.3
Hma1.2p1_0315F.1_g122740 Hydrangea macrophylla HOM05D007035 ORTHO05D008774 4.9e-77 291.6 206 68.9
Gorai.003G004700 Gossypium raimondii HOM05D007035 ORTHO05D008774 8.4e-77 290.8 205 65.9
Prupe.7G176600 Prunus persica HOM05D007035 ORTHO05D008774 8.4e-77 290.8 206 68.0
CSS0018213 Camellia sinensis var. sinensis HOM05D007035 ORTHO05D008774 1.4e-76 290.0 206 68.9
Ciclev10026505m.g Citrus clementina HOM05D007035 ORTHO05D008774 2.4e-76 289.3 205 67.8
Gohir.D03G004400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 3.2e-76 288.9 205 65.4
MD02G1242600 Malus domestica HOM05D007035 ORTHO05D008774 3.2e-76 288.9 206 67.5
Actinidia17600 Actinidia chinensis HOM05D007035 ORTHO05D008774 1.2e-75 287.0 206 68.0
vmacro18445 Vaccinium macrocarpon HOM05D007035 ORTHO05D008774 1.6e-75 286.6 206 68.4
Lalb_Chr05g0229721 Lupinus albus HOM05D007035 ORTHO05D008774 4.6e-75 285.0 206 66.5
FvH4_1g10900 Fragaria vesca HOM05D007035 ORTHO05D008774 6.0e-75 284.6 206 65.5
Psat4g103040 Pisum sativum HOM05D007035 ORTHO05D008774 6.0e-75 284.6 206 65.0
Medtr8g074720 Medicago truncatula HOM05D007035 ORTHO05D008774 7.9e-75 284.3 206 65.5
FAN19G1923 Fragaria x ananassa HOM05D007035 ORTHO05D008774 1.0e-74 283.9 206 65.5
PGR102G2581 Punica granatum HOM05D007035 ORTHO05D008774 1.3e-74 283.5 205 64.4
Eucgr.J02513 Eucalyptus grandis HOM05D007035 ORTHO05D008774 1.8e-74 283.1 203 67.5
TWI59G1021 Tripterygium wilfordii HOM05D007035 ORTHO05D008774 1.8e-74 283.1 205 69.3
FAN28G2890 Fragaria x ananassa HOM05D007035 ORTHO05D008774 2.3e-74 282.7 206 65.0
Sed0013381 Sechium edule HOM05D007035 ORTHO05D008774 2.3e-74 282.7 205 65.9
FAN26G0170 Fragaria x ananassa HOM05D007035 ORTHO05D008774 1.5e-73 280.0 205 64.9
MBI05_g35104_MAGBIO Magnolia biondii HOM05D007035 ORTHO05D008774 2.5e-73 279.3 213 65.3
FAN23G2784 Fragaria x ananassa HOM05D007035 ORTHO05D008774 3.3e-73 278.9 206 64.6
THA.LOC104807437 Tarenaya hassleriana HOM05D007035 ORTHO05D008774 5.6e-73 278.1 206 64.1
MELO3C007951.2 Cucumis melo HOM05D007035 ORTHO05D008774 7.4e-73 277.7 205 65.4
Phvul.003G267600 Phaseolus vulgaris HOM05D007035 ORTHO05D008774 7.4e-73 277.7 206 64.1
Lsat_1_v5_gn_2_75101 Lactuca sativa HOM05D007035 ORTHO05D008774 9.6e-73 277.3 208 65.9
Lj4g0012539 Lotus japonicus HOM05D007035 ORTHO05D008774 9.6e-73 277.3 206 64.1
ClCG01G020680 Citrullus lanatus HOM05D007035 ORTHO05D008774 1.3e-72 276.9 205 65.4
Potri.005G105500 Populus trichocarpa HOM05D007035 ORTHO05D008774 1.3e-72 276.9 206 66.0
CsaV3_6G047600 Cucumis sativus L. HOM05D007035 ORTHO05D008774 3.7e-72 275.4 206 65.0
EL10Ac9g22991 Beta vulgaris HOM05D007035 ORTHO05D008774 4.8e-72 275.0 206 63.1
Ca_03644_v3 Cicer arietinum L. HOM05D007035 ORTHO05D008774 8.1e-72 274.2 206 62.6
GSVIVG01006258001 Vitis vinifera HOM05D007035 ORTHO05D008774 1.4e-71 273.5 206 65.0
CDE09G0622 Ceratophyllum demersum HOM05D007035 ORTHO05D008774 1.8e-71 273.1 205 65.4
TPR.G32013 Trifolium pratense HOM05D007035 ORTHO05D008774 2.4e-71 272.7 198 65.2
A06p33710 Brassica napus HOM05D007035 ORTHO05D008774 5.3e-71 271.6 206 61.7
BraA06t26305Z Brassica rapa HOM05D007035 ORTHO05D008774 9.0e-71 270.8 206 61.7
CANSAT25G1910 Cannabis sativa HOM05D007035 ORTHO05D008774 1.2e-70 270.4 212 61.8
Ah.10g032510 Amaranthus hybridus HOM05D007035 ORTHO05D008774 1.5e-70 270.0 206 61.2
DCAR_027629 Daucus carota HOM05D007035 ORTHO05D008774 1.5e-70 270.0 204 63.7
Oeu008100.1 Olea europaea HOM05D007035 ORTHO05D008774 1.5e-70 270.0 206 63.6
HanXRQChr07g0192541 Helianthus annuus HOM05D007035 ORTHO05D008774 2.6e-70 269.2 206 65.0
C03p58600 Brassica napus HOM05D007035 ORTHO05D008774 4.5e-70 268.5 206 60.7
unitig_88.g27771 Utricularia gibba HOM05D007035 ORTHO05D008774 4.5e-70 268.5 211 61.6
Nitab4.5_0001696g0080 Nicotiana tabacum HOM05D007035 ORTHO05D008774 5.8e-70 268.1 206 63.1
AT2G17695 Arabidopsis thaliana HOM05D007035 ORTHO05D008774 7.6e-70 267.7 206 59.7
CAN.G890.13 Capsicum annuum HOM05D007035 ORTHO05D008774 1.7e-69 266.5 206 63.6
BcaB08g34751 Brassica carinata HOM05D007035 ORTHO05D008774 2.9e-69 265.8 206 60.7
BcaC01g02899 Brassica carinata HOM05D007035 ORTHO05D008774 2.9e-69 265.8 206 60.7
BolC3t18121H Brassica oleracea HOM05D007035 ORTHO05D008774 2.9e-69 265.8 206 60.7
Carub.0003s3179 Capsella rubella HOM05D007035 ORTHO05D008774 2.9e-69 265.8 206 59.2
Lj4A228G16 Lonicera japonica HOM05D007035 ORTHO05D008774 4.9e-69 265.0 184 69.6
PGSC0003DMG400001578 Solanum tuberosum HOM05D007035 ORTHO05D008774 4.9e-69 265.0 206 63.1
AL3G50680 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 8.4e-69 264.2 205 59.0
Thhalv10022849m.g Eutrema salsugineum HOM05D007035 ORTHO05D008774 1.9e-68 263.1 206 59.2
Sp3g31080 Schrenkiella parvula HOM05D007035 ORTHO05D008774 5.5e-68 261.5 206 58.3
Cc07_g12370 Coffea canephora HOM05D007035 ORTHO05D008774 2.1e-67 259.6 206 61.7
VMungo0251G2208 Vigna mungo HOM05D007035 ORTHO05D008774 2.7e-67 259.2 184 63.6
arahy.Tifrunner.gnm1.ann1.JN68AD Arachis hypogaea HOM05D007035 ORTHO05D008774 4.6e-67 258.5 206 61.2
arahy.Tifrunner.gnm1.ann1.Y2NACG Arachis hypogaea HOM05D007035 ORTHO05D008774 4.6e-67 258.5 206 61.2
Solyc02g083180.4 Solanum lycopersicum HOM05D007035 ORTHO05D008774 4.6e-67 258.5 206 61.7
Sopen02g027940 Solanum pennellii HOM05D007035 ORTHO05D008774 4.6e-67 258.5 206 61.7
Migut.L00741 Erythranthe guttata HOM05D007035 ORTHO05D008774 6.7e-66 254.6 206 60.7
SalBow5G2770 Salvia bowleyana HOM05D007035 ORTHO05D008774 6.7e-66 254.6 206 61.2
COL.COLO4_22513 Corchorus olitorius HOM05D007035 ORTHO05D008774 1.5e-65 253.4 205 61.5
SGA_v2.0_scaffold229G43297 Striga asiatica HOM05D001343 ORTHO05D002008 1.6e-64 250.0 206 59.7
Hund08627 Selenicereus undatus HOM05D007035 ORTHO05D008774 2.4e-63 246.1 181 63.5
HPP92_014997 Vanilla planifolia HOM05D007035 ORTHO05D008774 4.1e-63 245.4 207 56.5
Aa31LG8G14960 Aethionema arabicum HOM05D000088 ORTHO05D000933 1.2e-62 243.8 183 61.2
Os03g0107600 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 5.8e-62 241.5 213 54.5
Os04g0119300 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 5.8e-62 241.5 213 54.5
Zm00001eb241510 Zea mays HOM05D007035 ORTHO05D008774 5.8e-62 241.5 216 52.8
ECA238G0027 Erigeron canadensis HOM05D007035 ORTHO05D008774 7.2e-60 234.6 186 64.0
QL06p052340 Quercus lobata HOM05D007035 ORTHO05D008774 7.2e-60 234.6 167 68.3
Peaxi162Scf00300g00123 Petunia axillaris HOM05D007035 ORTHO05D008774 4.6e-59 231.9 175 61.7
AUR62032933 Chenopodium quinoa HOM05D007035 ORTHO05D008774 2.3e-58 229.6 164 63.4
ATR0661G057 Amborella trichopoda HOM05D007035 ORTHO05D008774 9.7e-57 224.2 188 56.9
RcHm_v2.0_Chr2g0098161 Rosa chinensis HOM05D007035 ORTHO05D008774 6.9e-55 218.0 168 62.5
Glyma.16G120900 Glycine max HOM05D007035 ORTHO05D008774 2.9e-53 212.6 164 62.8
MSTRG.15590 Avicennia marina HOM05D007035 ORTHO05D008774 3.8e-53 212.2 164 62.8
Sc20g0005390 Simmondsia chinensis HOM05D007035 ORTHO05D008774 2.7e-51 206.1 147 63.9
Pp3c1_37080 Physcomitrium patens HOM05D007035 ORTHO05D008774 3.6e-51 205.7 217 49.8
Aqoxy6G01870 Aquilegia oxysepala HOM05D007035 ORTHO05D008774 2.3e-50 203.0 149 66.4
Dinv40155 Davidia involucrata HOM05D002155 ORTHO05D002215 3.3e-49 199.1 148 65.5
Mapoly0027s0184 Marchantia polymorpha HOM05D007035 ORTHO05D008774 9.1e-47 191.0 219 43.4
Cpa.g.sc6.337 Carica papaya HOM05D007035 ORTHO05D008774 8.5e-45 184.5 149 61.1
AUR62017739 Chenopodium quinoa HOM05D007035 ORTHO05D008774 5.5e-44 181.8 125 65.6
AL3G27500 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 2.1e-43 179.9 139 54.7
CARHR107960 Cardamine hirsuta HOM05D007035 ORTHO05D008774 6.7e-42 174.9 123 62.6
SMO364G0252 Selaginella moellendorffii HOM05D007035 ORTHO05D008774 2.2e-40 169.9 157 51.6
Duzib147G1308 Durio zibethinus HOM05D007035 ORTHO05D008774 2.4e-39 166.4 169 50.3
Prupe.1G268600 Prunus persica HOM05D007035 ORTHO05D008774 4.4e-33 145.6 107 63.6
Prupe.6G001100 Prunus persica HOM05D007035 ORTHO05D008774 7.5e-33 144.8 107 63.6
SEGI_40855 Sequoiadendron giganteum HOM05D007035 ORTHO05D008774 7.0e-31 138.3 159 43.4
AagrBONN_evm.TU.Sc2ySwM_117.3401 Anthoceros agrestis HOM05D007035 ORTHO05D008774 1.6e-30 137.1 156 44.2
Eucgr.J01132 Eucalyptus grandis HOM05D007035 ORTHO05D008774 1.0e-26 124.4 148 46.6
CBR_g48433 Chara braunii HOM05D007035 ORTHO05D008774 3.0e-26 122.9 284 27.8
PRCOL_00002518 Prasinoderma coloniale HOM05D007035 ORTHO05D008774 8.8e-26 121.3 198 35.4
Cre17.g720550 Chlamydomonas reinhardtii HOM05D007035 ORTHO05D008774 7.5e-25 118.2 215 33.0
MCO10G322 Micromonas commoda HOM05D007035 ORTHO05D008774 1.2e-22 110.9 145 38.6
RcHm_v2.0_Chr5g0036401 Rosa chinensis HOM05D007035 ORTHO05D008774 1.8e-18 97.1 108 48.1
Cpa.g.sc6.336 Carica papaya HOM05D007035 ORTHO05D008774 4.4e-17 92.4 56 76.8
Peaxi162Scf00300g00119 Petunia axillaris HOM05D007035 ORTHO05D008774 9.2e-15 84.7 60 65.0
RcHm_v2.0_Chr5g0036471 Rosa chinensis HOM05D007035 ORTHO05D008774 1.5e-09 67.4 55 50.9


User provided reference genes

Program Settings