Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G4744 Papaver somniferum HOM05D005171 ORTHO05D006343 0.0e+00 2966.8 1539 100.0
PSO017G5154 Papaver somniferum HOM05D005171 ORTHO05D006343 1.7e-243 847.4 1570 41.4
Nn1g07734 Nelumbo nucifera HOM05D005171 ORTHO05D006343 2.1e-145 521.5 1563 31.8
MBI14_g37363_MAGBIO Magnolia biondii HOM05D005171 ORTHO05D006343 1.5e-122 445.7 1548 30.9
Duzib138G0034 Durio zibethinus HOM05D005171 ORTHO05D006343 1.5e-119 435.6 1574 31.0
Actinidia20619 Actinidia chinensis HOM05D005171 ORTHO05D006343 2.2e-118 431.8 1556 30.1
Atru.chr6.3433 Acer truncatum HOM05D005171 ORTHO05D006343 1.5e-114 419.1 1623 29.5
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 2.5e-114 418.3 1606 29.6
Haze_12584 Corylus avellana HOM05D005171 ORTHO05D006343 1.7e-110 405.6 1655 29.7
QL04p066976 Quercus lobata HOM05D005171 ORTHO05D006343 2.9e-110 404.8 1635 28.9
Actinidia20605 Actinidia chinensis HOM05D005171 ORTHO05D006343 5.5e-109 400.6 1539 29.5
Thecc.01G199700 Theobroma cacao HOM05D005171 ORTHO05D006343 1.2e-108 399.4 1589 29.4
TWI36G0325 Tripterygium wilfordii HOM05D005171 ORTHO05D006343 2.9e-102 378.3 1597 28.0
Potri.001G315950 Populus trichocarpa HOM05D005171 ORTHO05D006343 5.0e-102 377.5 1576 29.3
Manes.12G067100 Manihot esculenta HOM05D005171 ORTHO05D006343 8.5e-102 376.7 1600 28.5
Dinv05326 Davidia involucrata HOM05D005171 ORTHO05D006343 7.2e-101 373.6 843 35.8
PSO478G2888 Papaver somniferum HOM05D005171 ORTHO05D006343 2.8e-97 361.7 318 64.5
GSVIVG01030128001 Vitis vinifera HOM05D005171 ORTHO05D006343 1.2e-92 346.3 542 42.6
vmacro12061 Vaccinium macrocarpon HOM05D005171 ORTHO05D000013 1.6e-92 345.9 1664 28.2
Gorai.007G164500 Gossypium raimondii HOM05D005171 ORTHO05D006343 1.8e-91 342.4 1582 28.1
Prupe.3G194100 Prunus persica HOM05D005171 ORTHO05D006343 1.5e-90 339.3 1605 27.6
Sabra16G0199800 Salix brachista HOM05D005171 ORTHO05D006343 3.3e-90 338.2 1609 27.1
Ciclev10014049m.g Citrus clementina HOM05D005171 ORTHO05D006343 9.7e-90 336.7 1552 28.2
Sed0008164 Sechium edule HOM05D005171 ORTHO05D006343 9.7e-90 336.7 1573 28.2
PGR083G1863 Punica granatum HOM05D005171 ORTHO05D006343 2.2e-86 325.5 1569 26.4
FvH4_6g40370 Fragaria vesca HOM05D005171 ORTHO05D006343 4.2e-85 321.2 1562 28.4
Sed0010628 Sechium edule HOM05D005171 ORTHO05D006343 5.5e-85 320.9 1573 27.4
CSS0020778 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 4.7e-84 317.8 653 37.4
MD09G1131900 Malus domestica HOM05D005171 ORTHO05D006343 4.7e-84 317.8 1587 27.3
CSS0016995 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 6.1e-84 317.4 653 37.4
FAN05G5461 Fragaria x ananassa HOM05D005171 ORTHO05D006343 8.0e-84 317.0 1557 27.7
RcHm_v2.0_Chr2g0155571 Rosa chinensis HOM05D005171 ORTHO05D006343 1.8e-83 315.8 1570 28.3
MD17G1119600 Malus domestica HOM05D005171 ORTHO05D006343 3.0e-83 315.1 1598 27.2
Aqoxy1G04295 Aquilegia oxysepala HOM05D005171 ORTHO05D006343 3.9e-83 314.7 637 37.4
COL.COLO4_19656 Corchorus olitorius HOM05D005171 ORTHO05D006343 3.9e-83 314.7 1561 27.3
FAN09G0598 Fragaria x ananassa HOM05D005171 ORTHO05D006343 2.0e-82 312.4 1567 27.2
FAN14G5634 Fragaria x ananassa HOM05D005171 ORTHO05D006343 4.4e-82 311.2 1568 27.7
TAR627G0484 Trochodendron aralioides HOM05D005171 ORTHO05D006343 7.4e-82 310.5 347 52.2
DCAR_012742 Daucus carota HOM05D005171 ORTHO05D006343 2.4e-80 305.4 1565 27.2
Rhsim06G0179100 Rhododendron simsii HOM05D005171 ORTHO05D006343 7.0e-80 303.9 1568 27.7
FAN02G4474 Fragaria x ananassa HOM05D005171 ORTHO05D006343 2.5e-77 295.4 1566 28.5
CsaV3_7G002340 Cucumis sativus L. HOM05D005171 ORTHO05D006343 7.2e-77 293.9 1565 27.0
Oeu056856.1 Olea europaea HOM05D005171 ORTHO05D006343 2.7e-76 292.0 1566 25.5
ClCG02G003060 Citrullus lanatus HOM05D005171 ORTHO05D006343 5.2e-75 287.7 1553 27.3
Gorai.004G060900 Gossypium raimondii HOM05D005171 ORTHO05D006343 2.0e-74 285.8 414 41.5
Gohir.D08G059000 Gossypium hirsutum HOM05D005171 ORTHO05D006343 4.4e-74 284.6 564 35.6
Solyc07g045170.3 Solanum lycopersicum HOM05D005171 ORTHO05D006343 1.1e-72 280.0 1571 25.7
Psat5g105360 Pisum sativum HOM05D005171 ORTHO05D006343 1.4e-72 279.6 1596 26.3
Sopen07g023720 Solanum pennellii HOM05D005171 ORTHO05D006343 5.3e-72 277.7 1585 26.2
Gohir.D11G154400 Gossypium hirsutum HOM05D005171 ORTHO05D006343 1.2e-71 276.6 976 29.4
Lalb_Chr10g0094191 Lupinus albus HOM05D005171 ORTHO05D006343 3.8e-70 271.6 435 39.3
CANSAT64G2466 Cannabis sativa HOM05D005171 ORTHO05D006343 5.0e-70 271.2 1588 26.7
PSO478G0307 Papaver somniferum HOM05D005171 ORTHO05D006343 1.1e-69 270.0 755 35.8
Migut.M00063 Erythranthe guttata HOM05D005171 ORTHO05D006343 1.9e-69 269.2 1555 25.6
Hund13065 Selenicereus undatus HOM05D005171 ORTHO05D006343 9.4e-69 266.9 1556 24.4
Glyma.13G008500 Glycine max HOM05D005171 ORTHO05D006343 1.6e-68 266.2 468 38.2
Ca_16333_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 3.6e-68 265.0 462 37.2
Ca_30417_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 3.6e-68 265.0 462 37.2
Glyma.20G060900 Glycine max HOM05D005171 ORTHO05D006343 6.1e-68 264.2 466 38.6
Peaxi162Scf00359g00324 Petunia axillaris HOM05D005171 ORTHO05D006343 1.2e-66 260.0 1584 25.7
PSO675G6191 Papaver somniferum HOM05D005171 ORTHO05D006343 2.6e-66 258.8 139 96.4
TAR627G0657 Trochodendron aralioides HOM05D005171 ORTHO05D006343 5.7e-66 257.7 482 43.2
CiPaw.03G284100 Carya illinoinensis HOM05D005171 ORTHO05D006343 9.8e-66 256.9 527 37.2
Sc20g0003130 Simmondsia chinensis HOM05D005171 ORTHO05D006343 6.3e-65 254.2 1579 25.4
SalBow7G0294 Salvia bowleyana HOM05D005171 ORTHO05D006343 4.1e-64 251.5 492 33.5
Lj6g0011858 Lotus japonicus HOM05D005171 ORTHO05D006343 1.2e-63 250.0 487 35.1
ATR0751G269 Amborella trichopoda HOM05D005171 ORTHO05D006343 7.7e-63 247.3 1636 26.3
CDE01G0402 Ceratophyllum demersum HOM05D005171 ORTHO05D006343 3.8e-62 245.0 1567 25.8
arahy.Tifrunner.gnm1.ann1.DUBF95 Arachis hypogaea HOM05D005171 ORTHO05D006343 1.5e-61 243.0 565 34.0
SGA_v2.0_scaffold181G39698 Striga asiatica HOM05D005171 ORTHO05D006343 2.5e-61 242.3 1604 24.4
Eucgr.A01375 Eucalyptus grandis HOM05D005171 ORTHO05D006343 4.7e-60 238.0 429 35.4
Cpa.g.sc136.57 Carica papaya HOM05D005171 ORTHO05D006343 8.0e-60 237.3 386 38.6
VMungo0331G1557 Vigna mungo HOM05D005171 ORTHO05D006343 2.6e-58 232.3 486 34.8
VMungo0540G0527 Vigna mungo HOM05D005171 ORTHO05D006343 1.1e-56 226.9 522 32.6
THA.LOC104815372 Tarenaya hassleriana HOM05D005171 ORTHO05D006343 7.0e-56 224.2 1595 25.5
Lsat_1_v5_gn_9_102901 Lactuca sativa HOM05D005171 ORTHO05D006343 9.2e-56 223.8 400 36.5
Nitab4.5_0004941g0030 Nicotiana tabacum HOM05D005171 ORTHO05D006343 1.2e-55 223.4 395 38.0
Cc05_g01980 Coffea canephora HOM05D005171 ORTHO05D006343 2.0e-55 222.6 1567 24.8
arahy.Tifrunner.gnm1.ann1.DEY0FQ Arachis hypogaea HOM05D005171 ORTHO05D006343 3.5e-55 221.9 425 37.9
A07p06800 Brassica napus HOM05D005171 ORTHO05D006343 3.5e-55 221.9 502 32.1
BcaC06g35856 Brassica carinata HOM05D005171 ORTHO05D006343 6.6e-54 217.6 503 31.2
C07p10370 Brassica napus HOM05D005171 ORTHO05D006343 6.6e-54 217.6 503 31.2
BolC7t41487H Brassica oleracea HOM05D005171 ORTHO05D006343 6.6e-54 217.6 503 31.2
BraA07t28471Z Brassica rapa HOM05D005171 ORTHO05D006343 8.6e-54 217.2 577 30.3
MBI14_g33664_MAGBIO Magnolia biondii HOM05D005171 ORTHO05D006343 1.1e-53 216.9 273 45.8
MELO3C024178.2 Cucumis melo HOM05D005171 ORTHO05D006343 5.6e-53 214.5 1565 25.0
arahy.Tifrunner.gnm1.ann1.U10BM9 Arachis hypogaea HOM05D005171 ORTHO05D006343 7.3e-53 214.2 373 36.2
EL10Ac2g03228 Beta vulgaris HOM05D005171 ORTHO05D006343 2.1e-52 212.6 1563 23.7
Nitab4.5_0003086g0060 Nicotiana tabacum HOM05D005171 ORTHO05D006343 2.1e-52 212.6 1589 25.7
Thhalv10002382m.g Eutrema salsugineum HOM05D005171 ORTHO05D006343 4.7e-52 211.5 424 32.8
Lj1C801G5 Lonicera japonica HOM05D005171 ORTHO05D006343 8.0e-52 210.7 477 33.5
Sp3g23130 Schrenkiella parvula HOM05D005171 ORTHO05D006343 1.2e-50 206.8 504 30.8
AL3G41930 Arabidopsis lyrata HOM05D005171 ORTHO05D006343 1.5e-50 206.5 426 32.4
BcaB06g26770 Brassica carinata HOM05D005171 ORTHO05D006343 4.4e-50 204.9 502 31.1
arahy.Tifrunner.gnm1.ann1.CJRH42 Arachis hypogaea HOM05D005171 ORTHO05D006343 3.7e-49 201.8 490 30.2
HanXRQChr13g0389891 Helianthus annuus HOM05D005171 ORTHO05D006343 3.2e-48 198.7 446 31.4
AT2G04235 Arabidopsis thaliana HOM05D005171 ORTHO05D006343 4.1e-48 198.4 429 31.9
Phvul.006G005000 Phaseolus vulgaris HOM05D005171 ORTHO05D006343 2.7e-47 195.7 418 33.7
Aa31sc733G10 Aethionema arabicum HOM05D005171 ORTHO05D006343 3.5e-47 195.3 1580 23.7
HanXRQChr09g0257391 Helianthus annuus HOM05D005171 ORTHO05D006343 3.5e-47 195.3 395 33.4
ECA240G4228 Erigeron canadensis HOM05D005171 ORTHO05D006343 6.0e-47 194.5 409 34.2
HPP92_000125 Vanilla planifolia HOM05D005171 ORTHO05D006343 1.1e-45 190.3 482 29.3
Gohir.A11G147500 Gossypium hirsutum HOM05D005171 ORTHO05D006343 1.5e-45 189.9 395 35.4
Hma1.2p1_0629F.1_g192130 Hydrangea macrophylla HOM05D005171 ORTHO05D006343 1.8e-43 183.0 280 42.1
Zm00001eb386590 Zea mays HOM05D005171 ORTHO05D006343 3.7e-41 175.3 486 28.6
Lsat_1_v5_gn_7_97220 Lactuca sativa HOM05D005171 ORTHO05D006343 9.2e-40 170.6 320 36.6
Gohir.A08G049000 Gossypium hirsutum HOM05D005171 ORTHO05D006343 7.3e-37 161.0 283 35.7
Carub.0003s2593 Capsella rubella HOM05D005171 ORTHO05D006343 2.2e-33 149.4 1590 21.4
AUR62018228 Chenopodium quinoa HOM05D005171 ORTHO05D006343 2.2e-33 149.4 1626 22.0
unitig_37.g12589 Utricularia gibba HOM05D005171 ORTHO05D006343 6.4e-33 147.9 415 28.7
AUR62037747 Chenopodium quinoa HOM05D005171 ORTHO05D006343 3.2e-32 145.6 1608 21.7
Dinv21324 Davidia involucrata HOM05D005171 ORTHO05D006343 1.6e-31 143.3 146 54.1
Duzib211G0583 Durio zibethinus HOM05D005171 ORTHO05D006343 1.1e-27 130.6 143 45.5
Ah.10g032550 Amaranthus hybridus HOM05D005171 ORTHO05D006343 8.4e-25 120.9 371 29.9
Hma1.2p1_0629F.1_g192120 Hydrangea macrophylla HOM05D005171 ORTHO05D006343 1.9e-21 109.8 355 33.0
TPR.G27424 Trifolium pratense HOM05D005171 ORTHO05D006343 3.1e-19 102.4 246 39.0
PGSC0003DMG400017412 Solanum tuberosum HOM05D005171 ORTHO05D006343 6.9e-19 101.3 127 44.9
Os06g0608100 Oryza sativa ssp. japonica HOM05D005171 ORTHO05D006343 2.0e-18 99.8 249 36.5
TPR.G30970 Trifolium pratense HOM05D005171 ORTHO05D006343 7.6e-18 97.8 150 38.0
arahy.Tifrunner.gnm1.ann1.AZD9M5 Arachis hypogaea HOM05D005171 ORTHO05D006343 1.6e-12 80.1 282 33.0
CANSAT11G0838 Cannabis sativa HOM05D005171 ORTHO05D006343 1.6e-12 80.1 91 53.8
SEGI_15711 Sequoiadendron giganteum HOM05D005171 ORTHO05D006343 5.8e-10 71.6 121 31.4
SEGI_11604 Sequoiadendron giganteum HOM05D005171 ORTHO05D006343 6.4e-09 68.2 103 38.8
Oeu036991.1 Olea europaea HOM05D005171 ORTHO05D006343 3.2e-08 65.9 122 36.9
SEGI_34464 Sequoiadendron giganteum HOM05D005171 ORTHO05D030606 5.4e-08 65.1 149 24.2
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 3.0e-06 59.3 87 39.1


User provided reference genes

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