Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 8.0e-194 680.2 344 100.0
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 7.0e-190 667.2 344 98.3
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 1.8e-105 386.7 347 59.1
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 6.9e-105 384.8 358 58.9
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 2.9e-103 379.4 340 59.4
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 7.4e-99 364.8 322 59.0
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 2.6e-96 356.3 356 54.8
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 3.5e-96 355.9 349 55.9
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 2.9e-95 352.8 336 56.8
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 1.5e-94 350.5 346 53.8
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 1.9e-94 350.1 352 56.0
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 2.7e-93 346.3 344 55.5
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 3.6e-93 345.9 346 53.8
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 1.8e-92 343.6 350 53.1
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 2.0e-91 340.1 346 52.6
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 2.6e-91 339.7 349 53.6
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 2.6e-91 339.7 354 54.5
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 2.6e-91 339.7 353 53.8
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 3.3e-91 339.3 288 63.2
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 5.7e-91 338.6 351 53.8
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 9.7e-91 337.8 343 53.9
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 1.7e-90 337.0 288 61.1
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 8.2e-90 334.7 351 54.1
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 1.8e-89 333.6 353 52.4
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 1.8e-89 333.6 344 53.2
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 3.1e-89 332.8 336 55.4
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 5.3e-89 332.0 261 65.9
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 1.6e-88 330.5 309 57.0
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 3.5e-88 329.3 345 52.5
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 7.7e-88 328.2 353 51.8
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 7.7e-88 328.2 359 53.2
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 1.1e-86 324.3 274 60.6
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 7.2e-86 321.6 354 50.6
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 9.4e-86 321.2 272 58.8
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 2.1e-85 320.1 338 54.7
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 2.1e-85 320.1 268 60.1
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 2.7e-85 319.7 356 47.8
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 3.6e-85 319.3 272 61.0
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 6.1e-85 318.5 274 60.2
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 6.1e-85 318.5 320 54.1
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 8.0e-85 318.2 308 56.2
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 8.0e-85 318.2 331 52.9
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 1.4e-84 317.4 269 60.2
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 1.4e-84 317.4 301 55.1
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 3.0e-84 316.2 256 62.1
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 3.0e-84 316.2 240 65.0
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 1.2e-83 314.3 268 60.8
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 1.5e-83 313.9 338 53.0
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 2.6e-83 313.2 316 52.5
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 2.6e-83 313.2 330 50.9
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 3.4e-83 312.8 340 52.1
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 3.4e-83 312.8 260 60.0
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 3.4e-83 312.8 306 55.2
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 3.4e-83 312.8 268 59.3
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 4.4e-83 312.4 304 55.3
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 7.5e-83 311.6 268 59.0
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 9.8e-83 311.2 345 51.9
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 1.3e-82 310.8 354 50.6
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 1.3e-82 310.8 268 60.1
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 1.3e-82 310.8 362 50.3
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 1.7e-82 310.5 292 57.2
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 2.2e-82 310.1 361 52.1
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 3.7e-82 309.3 308 55.2
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 4.8e-82 308.9 246 62.2
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 8.3e-82 308.1 315 52.7
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 1.4e-81 307.4 345 50.7
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 1.8e-81 307.0 268 58.2
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 2.4e-81 306.6 344 51.7
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 2.4e-81 306.6 263 60.5
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 3.1e-81 306.2 397 46.1
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 7.0e-81 305.1 267 59.6
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 4.5e-80 302.4 363 48.5
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 5.9e-80 302.0 331 51.4
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 7.7e-80 301.6 331 51.4
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 1.0e-79 301.2 343 51.0
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 1.7e-79 300.4 339 51.3
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 1.7e-79 300.4 339 51.3
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 1.7e-79 300.4 275 55.6
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 2.2e-79 300.1 263 60.8
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 2.2e-79 300.1 367 47.4
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 2.9e-79 299.7 387 46.0
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 5.0e-79 298.9 347 49.6
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 5.0e-79 298.9 257 59.9
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 5.0e-79 298.9 291 55.0
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 8.5e-79 298.1 272 56.6
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 1.5e-78 297.4 246 61.0
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 2.5e-78 296.6 340 51.2
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 7.2e-78 295.0 230 64.3
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 7.2e-78 295.0 229 63.3
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 2.1e-77 293.5 332 50.9
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 2.7e-77 293.1 346 49.1
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 6.1e-77 292.0 262 57.3
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 1.0e-76 291.2 332 49.4
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 3.0e-76 289.7 287 54.7
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 5.2e-76 288.9 279 54.5
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 6.8e-76 288.5 171 77.2
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 6.8e-76 288.5 288 53.8
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 1.2e-75 287.7 218 64.7
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 3.4e-75 286.2 228 63.2
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 5.7e-75 285.4 217 66.4
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 2.2e-74 283.5 273 56.4
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 1.8e-73 280.4 287 52.6
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 5.0e-71 272.3 191 68.1
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 1.4e-68 264.2 229 62.0
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 5.2e-68 262.3 207 59.9
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 1.5e-67 260.8 188 68.1
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 4.3e-62 242.7 211 55.5
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 3.6e-61 239.6 278 46.8
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 4.7e-61 239.2 224 52.7
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 1.8e-60 237.3 270 45.6
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 1.2e-56 224.6 150 72.0
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 3.4e-51 206.5 219 51.6
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 6.4e-50 202.2 317 38.5
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 1.9e-49 200.7 234 44.9
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 2.1e-48 197.2 121 74.4
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 2.5e-46 190.3 213 47.9
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 3.3e-46 189.9 207 46.9
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 5.8e-43 179.1 103 75.7
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 1.4e-28 131.3 79 73.4
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 2.4e-28 130.6 69 81.2
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 1.3e-18 98.2 188 36.7
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 4.8e-13 79.7 58 63.8
BolC8t49668H Brassica oleracea HOM05D005712 ORTHO05D032168 1.1e-09 68.6 131 33.6
BcaB03g14422 Brassica carinata HOM05D005712 ORTHO05D014368 3.9e-07 60.1 43 62.8
BcaC07g39055 Brassica carinata HOM05D005712 ORTHO05D032168 1.9e-06 57.8 148 29.7
HPP92_022533 Vanilla planifolia HOM05D004721 ORTHO05D005765 2.5e-06 57.4 75 44.0
C08p20390 Brassica napus HOM05D005712 ORTHO05D032168 9.6e-06 55.5 132 34.1


User provided reference genes

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