Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 4.0e-114 414.8 222 100.0
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 1.9e-111 406.0 222 97.7
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 8.1e-38 161.4 222 51.4
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 1.9e-34 150.2 212 46.7
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 3.0e-32 142.9 213 46.9
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 3.0e-32 142.9 218 47.2
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 3.9e-32 142.5 222 46.8
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 6.2e-30 135.2 217 43.3
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 1.2e-28 131.0 216 44.0
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 4.4e-28 129.0 220 42.7
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 2.2e-27 126.7 216 42.1
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 2.9e-27 126.3 215 44.2
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 2.9e-27 126.3 185 46.5
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 3.8e-27 125.9 223 45.3
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 4.9e-27 125.6 211 43.6
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 6.4e-27 125.2 210 43.8
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 6.4e-27 125.2 217 43.3
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 6.4e-27 125.2 215 42.3
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 8.4e-27 124.8 217 44.7
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 8.4e-27 124.8 223 42.6
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 1.4e-26 124.0 181 51.4
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 3.2e-26 122.9 219 39.7
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 4.1e-26 122.5 217 44.2
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 4.1e-26 122.5 217 44.2
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 5.4e-26 122.1 224 42.0
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 1.6e-25 120.6 217 44.7
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 1.6e-25 120.6 223 42.2
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 2.1e-25 120.2 189 48.1
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 2.7e-25 119.8 188 46.3
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 2.7e-25 119.8 188 45.7
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 4.6e-25 119.0 191 43.5
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 6.0e-25 118.6 190 43.2
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 7.8e-25 118.2 191 43.5
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 7.8e-25 118.2 189 47.6
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 1.3e-24 117.5 224 40.2
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 1.7e-24 117.1 225 40.4
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 1.7e-24 117.1 186 45.2
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 3.0e-24 116.3 185 44.9
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 3.9e-24 115.9 220 43.2
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 3.9e-24 115.9 221 42.5
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 5.1e-24 115.5 225 44.0
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 5.1e-24 115.5 217 42.9
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 5.1e-24 115.5 191 42.9
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 8.6e-24 114.8 220 39.1
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 1.1e-23 114.4 216 40.7
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 1.5e-23 114.0 219 41.1
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 5.6e-23 112.1 193 45.1
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 7.3e-23 111.7 223 41.3
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 1.6e-22 110.5 225 41.3
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 2.1e-22 110.2 207 42.0
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 6.2e-22 108.6 185 42.2
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 6.2e-22 108.6 223 42.6
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 1.8e-21 107.1 220 40.0
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 4.0e-21 105.9 191 42.9
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 4.0e-21 105.9 221 43.4
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 4.0e-21 105.9 211 38.9
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 8.9e-21 104.8 215 43.7
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 2.6e-20 103.2 190 41.1
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 2.6e-20 103.2 183 40.4
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 1.3e-19 100.9 228 40.4
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 2.9e-19 99.8 215 39.1
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 8.4e-19 98.2 218 39.4
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 1.9e-18 97.1 195 40.0
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 2.4e-18 96.7 188 41.0
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 2.4e-18 96.7 206 39.8
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 2.4e-18 96.7 190 41.6
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 2.4e-18 96.7 192 42.7
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 5.4e-18 95.5 218 40.8
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 5.4e-18 95.5 186 41.9
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 7.1e-18 95.1 224 39.7
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 1.6e-17 94.0 219 37.9
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 3.5e-17 92.8 218 38.1
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 3.5e-17 92.8 185 40.5
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 3.5e-17 92.8 209 39.2
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 4.6e-17 92.4 187 39.6
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 4.6e-17 92.4 187 39.6
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 6.0e-17 92.0 212 38.2
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 6.0e-17 92.0 223 39.9
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 1.0e-16 91.3 188 40.4
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 1.0e-16 91.3 220 37.7
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 1.3e-16 90.9 212 37.7
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 1.3e-16 90.9 213 38.0
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 1.3e-16 90.9 205 41.0
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 1.3e-16 90.9 189 39.7
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 1.7e-16 90.5 192 40.1
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 2.3e-16 90.1 191 38.2
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 2.3e-16 90.1 191 37.2
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 3.0e-16 89.7 222 36.9
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 6.6e-16 88.6 192 37.5
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 6.6e-16 88.6 192 37.5
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 1.1e-15 87.8 214 37.9
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 1.1e-15 87.8 218 37.2
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 1.1e-15 87.8 194 41.2
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 1.5e-15 87.4 148 39.2
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 1.5e-15 87.4 179 41.3
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 1.5e-15 87.4 179 41.3
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 5.6e-15 85.5 215 36.7
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 5.6e-15 85.5 216 38.4
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 2.1e-14 83.6 208 38.5
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 2.8e-14 83.2 211 37.4
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 3.6e-14 82.8 210 36.7
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 1.4e-13 80.9 193 37.8
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 2.4e-13 80.1 224 38.4
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 5.3e-13 79.0 218 35.3
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 6.9e-13 78.6 234 33.8
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 1.5e-12 77.4 127 41.7
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 2.6e-12 76.6 190 35.8
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 3.4e-12 76.3 180 37.2
CDE05G1909 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 4.5e-12 75.9 180 40.0
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 4.5e-12 75.9 188 36.2
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 4.5e-12 75.9 217 36.9
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 4.9e-11 72.4 182 36.8
CDE04G0695 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 8.4e-11 71.6 171 38.6
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 7.1e-10 68.6 229 33.2
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 7.1e-10 68.6 152 40.1
HPP92_021048 Vanilla planifolia HOM05D005571 ORTHO05D006919 6.0e-09 65.5 180 35.0
A02p05480 Brassica napus HOM05D005571 ORTHO05D006919 1.8e-08 63.9 93 49.5
BraA02t05499Z Brassica rapa HOM05D005571 ORTHO05D006919 1.8e-08 63.9 93 49.5
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 1.8e-08 63.9 193 32.1
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 3.9e-08 62.8 149 35.6
BcaC03g13663 Brassica carinata HOM05D005571 ORTHO05D006919 8.7e-08 61.6 93 50.5
BNapus_Darmor_BZH_scaffold_38p02630 Brassica napus HOM05D005571 ORTHO05D006919 8.7e-08 61.6 93 50.5
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 5.6e-07 58.9 82 40.2
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 7.4e-07 58.5 177 36.2
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 7.4e-07 58.5 177 36.2
BolC9t58559H Brassica oleracea HOM05D005571 ORTHO05D006919 7.4e-07 58.5 177 36.2
Duzib128G0429 Durio zibethinus HOM05D005571 ORTHO05D006919 2.8e-06 56.6 91 34.1
Solyc04g082380.4 Solanum lycopersicum HOM05D005571 ORTHO05D006919 3.6e-06 56.2 101 40.6


User provided reference genes

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