Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G4573 Papaver somniferum HOM05D007547 ORTHO05D009590 5.2e-41 170.6 87 100.0
Migut.M01490 Erythranthe guttata HOM05D007547 ORTHO05D009590 2.8e-26 121.7 88 78.4
TAR624G0069 Trochodendron aralioides HOM05D007547 ORTHO05D009590 2.3e-25 118.6 87 78.2
SalBow8G1259 Salvia bowleyana HOM05D007547 ORTHO05D009590 2.0e-24 115.5 88 75.0
MBI07_g10939_MAGBIO Magnolia biondii HOM05D005219 ORTHO05D006451 2.6e-24 115.2 86 75.6
CDE06G1569 Ceratophyllum demersum HOM05D000146 ORTHO05D000178 4.4e-24 114.4 87 73.6
AL4G11130 Arabidopsis lyrata HOM05D007547 ORTHO05D009590 2.2e-23 112.1 88 73.9
Thhalv10019600m.g Eutrema salsugineum HOM05D007547 ORTHO05D009590 2.9e-23 111.7 88 72.7
Carub.0004s0086 Capsella rubella HOM05D007547 ORTHO05D009590 3.7e-23 111.3 88 72.7
CARHR072880 Cardamine hirsuta HOM05D007547 ORTHO05D009590 3.7e-23 111.3 88 72.7
MELO3C026033.2 Cucumis melo HOM05D007547 ORTHO05D009590 3.7e-23 111.3 88 73.9
Sp5g34290 Schrenkiella parvula HOM05D007547 ORTHO05D009590 3.7e-23 111.3 86 74.4
Nn1g09847 Nelumbo nucifera HOM05D007547 ORTHO05D009590 4.9e-23 110.9 86 73.3
ClCG04G006620 Citrullus lanatus HOM05D007547 ORTHO05D009590 8.3e-23 110.2 88 72.7
AT2G21820 Arabidopsis thaliana HOM05D007547 ORTHO05D009590 1.1e-22 109.8 88 72.7
Aqoxy1G00763 Aquilegia oxysepala HOM05D007547 ORTHO05D009590 1.4e-22 109.4 88 73.9
QL04p096330 Quercus lobata HOM05D007547 ORTHO05D009590 1.4e-22 109.4 86 75.6
Sed0025991 Sechium edule HOM05D007547 ORTHO05D009590 1.9e-22 109.0 88 71.6
Sc15g0005120 Simmondsia chinensis HOM05D007547 ORTHO05D009590 2.4e-22 108.6 90 70.0
Atru.chr1.6 Acer truncatum HOM05D007547 ORTHO05D009590 3.2e-22 108.2 87 69.0
MD05G1241500 Malus domestica HOM05D007547 ORTHO05D009590 3.2e-22 108.2 88 69.3
A07p27220 Brassica napus HOM05D007547 ORTHO05D009590 4.1e-22 107.8 88 71.6
BraA07t30366Z Brassica rapa HOM05D007547 ORTHO05D009590 4.1e-22 107.8 88 71.6
unitig_26.g10053 Utricularia gibba HOM05D007547 ORTHO05D009590 5.4e-22 107.5 86 68.6
Aa31LG4G1780 Aethionema arabicum HOM05D007547 ORTHO05D009590 7.1e-22 107.1 88 71.6
EL10Ac1g02249 Beta vulgaris HOM05D007547 ORTHO05D009590 1.2e-21 106.3 90 67.8
BcaC08g45367 Brassica carinata HOM05D007547 ORTHO05D009590 2.1e-21 105.5 88 70.5
THA.LOC104808152 Tarenaya hassleriana HOM05D007547 ORTHO05D009590 2.1e-21 105.5 88 70.5
Potri.010G176200 Populus trichocarpa HOM05D007547 ORTHO05D009590 3.5e-21 104.8 86 70.9
BolC6t38159H Brassica oleracea HOM05D007547 ORTHO05D009590 4.6e-21 104.4 88 69.3
QL04p096363 Quercus lobata HOM05D007547 ORTHO05D009590 4.6e-21 104.4 86 73.3
Ciclev10007105m.g Citrus clementina HOM05D007547 ORTHO05D009590 6.0e-21 104.0 89 67.4
BraA07t31944Z Brassica rapa HOM05D007547 ORTHO05D009590 7.8e-21 103.6 88 67.0
RcHm_v2.0_Chr5g0022881 Rosa chinensis HOM05D007547 ORTHO05D009590 7.8e-21 103.6 86 66.3
BcaC08g47491 Brassica carinata HOM05D007547 ORTHO05D009590 1.0e-20 103.2 88 67.0
C06p53150 Brassica napus HOM05D007547 ORTHO05D009590 1.0e-20 103.2 88 67.0
BolC6t40331H Brassica oleracea HOM05D007547 ORTHO05D009590 1.0e-20 103.2 88 67.0
CANSAT56G0291 Cannabis sativa HOM05D007547 ORTHO05D009590 1.7e-20 102.4 87 70.1
CsaV3_4G026690 Cucumis sativus L. HOM05D007547 ORTHO05D009590 1.7e-20 102.4 83 71.1
DCAR_013700 Daucus carota HOM05D007547 ORTHO05D009590 1.7e-20 102.4 88 68.2
FAN11G3189 Fragaria x ananassa HOM05D007547 ORTHO05D009590 1.7e-20 102.4 87 64.4
Manes.11G079000 Manihot esculenta HOM05D007547 ORTHO05D009590 1.7e-20 102.4 86 68.6
Sopen03g010530 Solanum pennellii HOM05D007547 ORTHO05D009590 1.7e-20 102.4 86 68.6
Solyc03g046380.1 Solanum lycopersicum HOM05D007547 ORTHO05D009590 2.3e-20 102.1 86 68.6
Ca_03316_v3 Cicer arietinum L. HOM05D007547 ORTHO05D009590 3.0e-20 101.7 88 68.2
Lj3g0009805 Lotus japonicus HOM05D007547 ORTHO05D009590 3.0e-20 101.7 88 68.2
CDE02G1937 Ceratophyllum demersum HOM05D007547 ORTHO05D009590 3.9e-20 101.3 87 67.8
Medtr2g062800 Medicago truncatula HOM05D007547 ORTHO05D009590 3.9e-20 101.3 86 68.6
Phvul.005G044200 Phaseolus vulgaris HOM05D007547 ORTHO05D009590 3.9e-20 101.3 88 65.9
Psat1g131000 Pisum sativum HOM05D007547 ORTHO05D009590 3.9e-20 101.3 88 67.0
Eucgr.F04485 Eucalyptus grandis HOM05D007547 ORTHO05D009590 6.6e-20 100.5 90 63.3
CSS0011642 Camellia sinensis var. sinensis HOM05D007547 ORTHO05D009590 1.1e-19 99.8 88 65.9
Nitab4.5_0001982g0020 Nicotiana tabacum HOM05D007547 ORTHO05D009590 1.1e-19 99.8 89 65.2
HPP92_021471 Vanilla planifolia HOM05D007547 ORTHO05D009590 1.1e-19 99.8 88 62.5
Glyma.08G160800 Glycine max HOM05D007547 ORTHO05D009590 1.5e-19 99.4 88 65.9
Ah.11g039500 Amaranthus hybridus HOM05D007547 ORTHO05D009590 1.9e-19 99.0 88 65.9
CAN.G497.31 Capsicum annuum HOM05D007547 ORTHO05D009590 1.9e-19 99.0 90 66.7
FAN16G2958 Fragaria x ananassa HOM05D007547 ORTHO05D009590 1.9e-19 99.0 88 62.5
PGSC0003DMG400018766 Solanum tuberosum HOM05D007547 ORTHO05D009590 2.5e-19 98.6 86 68.6
Nitab4.5_0009717g0010 Nicotiana tabacum HOM05D007547 ORTHO05D009590 4.3e-19 97.8 89 64.0
Peaxi162Scf00479g00092 Petunia axillaris HOM05D007547 ORTHO05D009590 4.3e-19 97.8 88 65.9
TWI59G1298 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 4.3e-19 97.8 87 72.4
TPR.G3626 Trifolium pratense HOM05D007547 ORTHO05D009590 5.6e-19 97.4 88 64.8
Cpa.g.sc118.6 Carica papaya HOM05D007547 ORTHO05D009590 7.3e-19 97.1 88 63.6
Lsat_1_v5_gn_5_102841 Lactuca sativa HOM05D007547 ORTHO05D009590 7.3e-19 97.1 89 64.0
AUR62035430 Chenopodium quinoa HOM05D007547 ORTHO05D009590 9.5e-19 96.7 90 64.4
AUR62035713 Chenopodium quinoa HOM05D007547 ORTHO05D009590 9.5e-19 96.7 90 64.4
ECA234G4113 Erigeron canadensis HOM05D007547 ORTHO05D009590 9.5e-19 96.7 89 62.9
Nitab4.5_0003384g0040 Nicotiana tabacum HOM05D007547 ORTHO05D009590 9.5e-19 96.7 86 66.3
QL04p096133 Quercus lobata HOM05D007547 ORTHO05D009590 1.2e-18 96.3 86 67.4
GSVIVG01036687001 Vitis vinifera HOM05D007547 ORTHO05D009590 2.8e-18 95.1 63 77.8
Gorai.009G322400 Gossypium raimondii HOM05D007547 ORTHO05D009590 3.6e-18 94.7 88 61.4
Lalb_Chr25g0284091 Lupinus albus HOM05D007547 ORTHO05D009590 3.6e-18 94.7 88 63.6
Gohir.D05G303200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 8.1e-18 93.6 88 61.4
Peaxi162Scf00020g01922 Petunia axillaris HOM05D007547 ORTHO05D009590 8.1e-18 93.6 65 76.9
Thecc.10G021200 Theobroma cacao HOM05D007547 ORTHO05D009590 8.1e-18 93.6 88 60.2
Haze_18453 Corylus avellana HOM05D007547 ORTHO05D009147 2.4e-17 92.0 82 69.5
Gohir.A06G138100 Gossypium hirsutum HOM05D007547 ORTHO05D009590 2.4e-17 92.0 88 58.0
Gohir.A07G180700 Gossypium hirsutum HOM05D007547 ORTHO05D009590 3.1e-17 91.7 88 58.0
Gohir.D03G067200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 3.1e-17 91.7 88 58.0
Gorai.008G081200 Gossypium raimondii HOM05D007547 ORTHO05D009590 4.0e-17 91.3 88 59.1
C06p29990 Brassica napus HOM05D007547 ORTHO05D009590 6.8e-17 90.5 76 69.7
Gohir.A02G145400 Gossypium hirsutum HOM05D007547 ORTHO05D009590 6.8e-17 90.5 88 56.8
Gohir.D03G007300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 8.9e-17 90.1 88 58.0
Gohir.A05G237600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.5e-16 89.4 88 56.8
Gohir.D11G227600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.5e-16 89.4 88 56.8
Gohir.A11G192300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 2.6e-16 88.6 88 56.8
COL.COLO4_25679 Corchorus olitorius HOM05D007547 ORTHO05D009590 7.6e-16 87.0 88 56.8
PGR031G1160 Punica granatum HOM05D007547 ORTHO05D009590 1.1e-14 83.2 88 55.7
Lalb_Chr25g0284071 Lupinus albus HOM05D007547 ORTHO05D009590 4.2e-14 81.3 86 58.1
TWI38G1141 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 7.1e-14 80.5 90 60.0
TWI38G2170 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 7.1e-14 80.5 90 60.0
BcaB02g07207 Brassica carinata HOM05D007547 ORTHO05D009590 1.6e-13 79.3 87 57.5
Gohir.A05G304300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 2.7e-13 78.6 80 56.2
Os08g0385000 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 2.7e-13 78.6 97 49.5
Zm00001eb055260 Zea mays HOM05D007547 ORTHO05D009590 1.0e-12 76.6 105 47.6
Rhsim04G0026600 Rhododendron simsii HOM05D007547 ORTHO05D009590 3.9e-12 74.7 89 56.2
Os01g0654400 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 1.5e-11 72.8 89 53.9
Mapoly0106s0030 Marchantia polymorpha HOM05D007547 ORTHO05D009590 1.3e-10 69.7 89 51.7
AL2G39720 Arabidopsis lyrata HOM05D000005 ORTHO05D000012 1.6e-10 69.3 45 77.8
SMO145G0072 Selaginella moellendorffii HOM05D007547 ORTHO05D009590 4.4e-08 61.2 89 50.6


User provided reference genes

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