Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G4552 Papaver somniferum HOM05D004532 ORTHO05D000028 7.1e-57 223.8 119 100.0
PSO675G3764 Papaver somniferum HOM05D000042 ORTHO05D000028 7.9e-40 167.2 108 80.6
Duzib116G0629 Durio zibethinus HOM05D004532 ORTHO05D000028 6.3e-13 77.8 106 40.6
Thecc.08G094200 Theobroma cacao HOM05D004532 ORTHO05D000028 1.1e-12 77.0 99 44.4
MSTRG.1048 Avicennia marina HOM05D000042 ORTHO05D000028 2.6e-11 72.4 99 42.4
COL.COLO4_28564 Corchorus olitorius HOM05D000021 ORTHO05D000028 4.5e-11 71.6 99 42.4
Cfa018031 Carpinus fangiana HOM05D004532 ORTHO05D000028 7.7e-11 70.9 105 39.0
Actinidia38089 Actinidia chinensis HOM05D000042 ORTHO05D000028 1.0e-10 70.5 86 41.9
Manes.18G043300 Manihot esculenta HOM05D000042 ORTHO05D000028 2.9e-10 68.9 104 40.4
Gohir.A05G207000 Gossypium hirsutum HOM05D000042 ORTHO05D000028 8.5e-10 67.4 99 37.4
Dinv35909 Davidia involucrata HOM05D001837 ORTHO05D000028 1.9e-09 66.2 99 39.4
CiPaw.15G048700 Carya illinoinensis HOM05D000042 ORTHO05D000028 2.5e-09 65.9 80 41.2
HanXRQChr05g0150571 Helianthus annuus HOM05D001837 ORTHO05D000028 3.2e-09 65.5 94 40.4
Lj4A761T86 Lonicera japonica HOM05D004532 ORTHO05D000028 3.2e-09 65.5 65 46.2
Potri.014G021000 Populus trichocarpa HOM05D004532 ORTHO05D000028 4.2e-09 65.1 61 50.8
Peaxi162Scf00848g00319 Petunia axillaris HOM05D004532 ORTHO05D000028 7.2e-09 64.3 99 38.4
Haze_18093 Corylus avellana HOM05D004532 ORTHO05D000028 9.4e-09 63.9 70 42.9
Gorai.009G216900 Gossypium raimondii HOM05D000042 ORTHO05D000028 9.4e-09 63.9 99 37.4
Gorai.005G100600 Gossypium raimondii HOM05D000042 ORTHO05D000028 1.6e-08 63.2 99 38.4
Prupe.1G427500 Prunus persica HOM05D000042 ORTHO05D000028 1.6e-08 63.2 112 33.0
Migut.C00517 Erythranthe guttata HOM05D000042 ORTHO05D000028 2.1e-08 62.8 90 38.9
Ciclev10001730m.g Citrus clementina HOM05D001837 ORTHO05D000028 2.7e-08 62.4 99 35.4
Cpa.g.sc21.134 Carica papaya HOM05D004532 ORTHO05D000028 4.7e-08 61.6 49 55.1
Glyma.04G043800 Glycine max HOM05D000042 ORTHO05D000028 4.7e-08 61.6 106 34.9
Gohir.D02G089900 Gossypium hirsutum HOM05D000042 ORTHO05D000028 4.7e-08 61.6 100 37.0
TAR625G1000 Trochodendron aralioides HOM05D001837 ORTHO05D000028 4.7e-08 61.6 56 48.2
CANSAT25G2386 Cannabis sativa HOM05D000042 ORTHO05D000028 6.1e-08 61.2 99 34.3
HanXRQChr15g0483111 Helianthus annuus HOM05D001837 ORTHO05D000028 6.1e-08 61.2 97 40.2
Hma1.2p1_0923F.1_g237150 Hydrangea macrophylla HOM05D000042 ORTHO05D000028 6.1e-08 61.2 68 47.1
Lsat_1_v5_gn_6_109820 Lactuca sativa HOM05D001837 ORTHO05D000028 6.1e-08 61.2 101 38.6
ECA246G0663 Erigeron canadensis HOM05D000086 ORTHO05D002912 7.9e-08 60.8 94 38.3
Cc10_g05320 Coffea canephora HOM05D001837 ORTHO05D000028 1.8e-07 59.7 90 40.0
Psat5g040360 Pisum sativum HOM05D000042 ORTHO05D000028 2.3e-07 59.3 96 38.5
DCAR_008840 Daucus carota HOM05D042413 ORTHO05D000028 3.0e-07 58.9 70 40.0
Medtr3g102570 Medicago truncatula HOM05D001837 ORTHO05D000028 3.9e-07 58.5 94 36.2
SGA_v2.0_scaffold26G11297 Striga asiatica HOM05D000042 ORTHO05D000028 3.9e-07 58.5 87 40.2
Phvul.009G069300 Phaseolus vulgaris HOM05D000042 ORTHO05D000028 6.7e-07 57.8 69 39.1
arahy.Tifrunner.gnm1.ann1.JU2Z2L Arachis hypogaea HOM05D004532 ORTHO05D000028 8.8e-07 57.4 56 41.1
Lj1g0023377 Lotus japonicus HOM05D000042 ORTHO05D000028 1.5e-06 56.6 102 37.3
Nn5g30466 Nelumbo nucifera HOM05D000042 ORTHO05D000028 1.5e-06 56.6 108 36.1
Ca_15922_v3 Cicer arietinum L. HOM05D000042 ORTHO05D000028 2.6e-06 55.8 100 36.0
FAN04G1122 Fragaria x ananassa HOM05D004532 ORTHO05D000028 2.6e-06 55.8 100 37.0
GSVIVG01009393001 Vitis vinifera HOM05D001837 ORTHO05D000028 2.6e-06 55.8 83 39.8
Oeu061838.1 Olea europaea HOM05D000042 ORTHO05D000028 3.3e-06 55.5 84 36.9
Sopen04g031890 Solanum pennellii HOM05D000042 ORTHO05D000028 3.3e-06 55.5 99 34.3
Solyc04g078300.3 Solanum lycopersicum HOM05D000042 ORTHO05D000028 4.4e-06 55.1 99 34.3
Nitab4.5_0000934g0190 Nicotiana tabacum HOM05D000042 ORTHO05D000028 5.7e-06 54.7 105 34.3
FAN08G2891 Fragaria x ananassa HOM05D004532 ORTHO05D000028 9.7e-06 53.9 99 37.4
FAN18G3338 Fragaria x ananassa HOM05D004532 ORTHO05D000028 9.7e-06 53.9 100 36.0


User provided reference genes

Program Settings