Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G4381 Papaver somniferum HOM05D005104 ORTHO05D006614 7.3e-128 460.7 252 100.0
PSO781G0266 Papaver somniferum HOM05D005104 ORTHO05D006614 2.1e-122 442.6 252 95.6
TAR628G1132 Trochodendron aralioides HOM05D005104 ORTHO05D006614 6.1e-74 281.6 257 64.6
Nn1g05321 Nelumbo nucifera HOM05D005104 ORTHO05D006614 1.1e-64 250.8 257 58.0
Dinv24198 Davidia involucrata HOM05D005104 ORTHO05D006614 5.7e-64 248.4 259 58.3
GSVIVG01003083001 Vitis vinifera HOM05D005104 ORTHO05D006614 3.7e-63 245.7 256 55.5
HanXRQChr10g0295831 Helianthus annuus HOM05D005104 ORTHO05D006614 8.2e-63 244.6 258 58.1
MSTRG.27791 Avicennia marina HOM05D005104 ORTHO05D006614 3.1e-62 242.7 254 55.5
Manes.14G166400 Manihot esculenta HOM05D005104 ORTHO05D006614 3.5e-61 239.2 257 56.4
Aqoxy6G00597 Aquilegia oxysepala HOM05D005104 ORTHO05D006614 1.0e-60 237.7 263 55.5
VMungo0251G0802 Vigna mungo HOM05D005104 ORTHO05D006614 1.0e-60 237.7 255 56.1
Eucgr.I02668 Eucalyptus grandis HOM05D005104 ORTHO05D006614 2.9e-60 236.1 257 57.2
PGR142G2776 Punica granatum HOM05D005104 ORTHO05D006614 3.8e-60 235.7 255 57.6
Phvul.002G208000 Phaseolus vulgaris HOM05D005104 ORTHO05D006614 5.0e-60 235.3 254 55.1
Actinidia28058 Actinidia chinensis HOM05D005104 ORTHO05D006614 1.4e-59 233.8 258 57.0
SGA_v2.0_scaffold45G17311 Striga asiatica HOM05D005104 ORTHO05D006614 1.4e-59 233.8 260 52.7
CDE10G0587 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 4.2e-59 232.3 259 52.1
Medtr4g094252 Medicago truncatula HOM05D005104 ORTHO05D006614 1.0e-57 227.6 257 54.1
Oeu007957.1 Olea europaea HOM05D005104 ORTHO05D006614 2.3e-57 226.5 258 55.4
Psat7g098720 Pisum sativum HOM05D005104 ORTHO05D006614 6.7e-57 224.9 257 54.5
Migut.N01063 Erythranthe guttata HOM05D005104 ORTHO05D006614 1.1e-56 224.2 255 53.7
SalBow6G6298 Salvia bowleyana HOM05D005104 ORTHO05D006614 1.5e-56 223.8 256 52.7
SalBow6G6009 Salvia bowleyana HOM05D005104 ORTHO05D006614 2.0e-56 223.4 257 53.3
CSS0037720 Camellia sinensis var. sinensis HOM05D005104 ORTHO05D006614 2.6e-56 223.0 259 54.1
Atru.chr6.1089 Acer truncatum HOM05D005104 ORTHO05D006614 5.7e-56 221.9 252 53.6
MELO3C018651.2 Cucumis melo HOM05D005104 ORTHO05D006614 5.7e-56 221.9 256 55.5
Duzib248G0158 Durio zibethinus HOM05D005104 ORTHO05D006614 5.7e-56 221.9 259 52.5
Lj4g0020611 Lotus japonicus HOM05D005104 ORTHO05D006614 5.7e-56 221.9 253 54.5
ECA234G0341 Erigeron canadensis HOM05D005104 ORTHO05D006614 7.4e-56 221.5 208 61.5
Cpa.g.sc42.74 Carica papaya HOM05D005104 ORTHO05D006614 9.7e-56 221.1 264 54.5
DCAR_001791 Daucus carota HOM05D005104 ORTHO05D006614 2.8e-55 219.5 264 53.8
Atru.chr6.1109 Acer truncatum HOM05D005104 ORTHO05D006614 6.3e-55 218.4 252 53.6
CsaV3_7G006430 Cucumis sativus L. HOM05D005104 ORTHO05D006614 1.1e-54 217.6 261 54.0
Glyma.08G073500 Glycine max HOM05D005104 ORTHO05D006614 1.1e-54 217.6 258 53.5
Haze_10684 Corylus avellana HOM05D005104 ORTHO05D006614 1.8e-54 216.9 253 54.2
Glyma.05G118400 Glycine max HOM05D005104 ORTHO05D006614 2.4e-54 216.5 254 52.0
Lsat_1_v5_gn_5_107140 Lactuca sativa HOM05D005104 ORTHO05D006614 2.4e-54 216.5 261 51.7
arahy.Tifrunner.gnm1.ann1.V9NXIE Arachis hypogaea HOM05D005104 ORTHO05D006614 3.1e-54 216.1 259 53.3
Gohir.A04G113100 Gossypium hirsutum HOM05D005104 ORTHO05D006614 4.1e-54 215.7 263 50.6
CANSAT11G2657 Cannabis sativa HOM05D005104 ORTHO05D006614 9.1e-54 214.5 269 52.0
Prupe.8G062400 Prunus persica HOM05D005104 ORTHO05D006614 9.1e-54 214.5 259 53.7
HPP92_006000 Vanilla planifolia HOM05D005104 ORTHO05D006614 1.6e-53 213.8 257 50.6
ATR0564G397 Amborella trichopoda HOM05D005104 ORTHO05D006614 2.6e-53 213.0 253 54.5
TPR.G10460 Trifolium pratense HOM05D005104 ORTHO05D006614 3.5e-53 212.6 210 59.5
Hma1.2p1_0522F.1_g171600 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 4.5e-53 212.2 205 58.5
PGSC0003DMG400017693 Solanum tuberosum HOM05D005104 ORTHO05D006614 4.5e-53 212.2 259 51.0
Thecc.02G140100 Theobroma cacao HOM05D005104 ORTHO05D006614 5.9e-53 211.8 257 50.6
arahy.Tifrunner.gnm1.ann1.PH7E5N Arachis hypogaea HOM05D005104 ORTHO05D006614 7.7e-53 211.5 256 52.7
Cfa005608 Carpinus fangiana HOM05D005104 ORTHO05D006614 7.7e-53 211.5 260 53.1
Sopen10g017460 Solanum pennellii HOM05D005104 ORTHO05D006614 7.7e-53 211.5 255 50.6
ClCG09G015340 Citrullus lanatus HOM05D005104 ORTHO05D006614 1.0e-52 211.1 280 51.1
TWI59G0245 Tripterygium wilfordii HOM05D005104 ORTHO05D006614 1.0e-52 211.1 256 51.6
MD10G1051500 Malus domestica HOM05D005104 ORTHO05D006614 1.3e-52 210.7 258 53.1
CiPaw.05G036500 Carya illinoinensis HOM05D005104 ORTHO05D006614 1.7e-52 210.3 258 52.3
Ca_18345_v3 Cicer arietinum L. HOM05D005104 ORTHO05D006614 1.7e-52 210.3 277 49.5
vmacro19925 Vaccinium macrocarpon HOM05D005104 ORTHO05D006614 1.7e-52 210.3 298 47.7
FAN27G3119 Fragaria x ananassa HOM05D005104 ORTHO05D006614 2.2e-52 209.9 252 52.4
Lalb_Chr10g0097741 Lupinus albus HOM05D005104 ORTHO05D006614 2.9e-52 209.5 257 51.0
Gohir.D04G154400 Gossypium hirsutum HOM05D005104 ORTHO05D006614 3.8e-52 209.1 257 50.6
Gorai.012G141700 Gossypium raimondii HOM05D005104 ORTHO05D006614 3.8e-52 209.1 257 50.6
Sed0008592 Sechium edule HOM05D005104 ORTHO05D006614 5.0e-52 208.8 254 52.8
RcHm_v2.0_Chr6g0273461 Rosa chinensis HOM05D005104 ORTHO05D006614 6.5e-52 208.4 257 51.4
COL.COLO4_20953 Corchorus olitorius HOM05D005104 ORTHO05D006614 8.5e-52 208.0 258 50.0
BcaB02g09781 Brassica carinata HOM05D005104 ORTHO05D006614 3.2e-51 206.1 255 51.0
AT5G64160 Arabidopsis thaliana HOM05D005104 ORTHO05D006614 5.5e-51 205.3 256 49.2
Thhalv10004872m.g Eutrema salsugineum HOM05D005104 ORTHO05D006614 7.2e-51 204.9 256 50.4
Gohir.A04G112960 Gossypium hirsutum HOM05D005104 ORTHO05D006614 9.4e-51 204.5 214 54.2
Sp2g27220 Schrenkiella parvula HOM05D005104 ORTHO05D006614 9.4e-51 204.5 256 50.4
FvH4_2g12710 Fragaria vesca HOM05D005104 ORTHO05D006614 1.2e-50 204.1 252 52.0
AL8G41430 Arabidopsis lyrata HOM05D005104 ORTHO05D006614 2.1e-50 203.4 255 49.0
FAN20G1981 Fragaria x ananassa HOM05D005104 ORTHO05D006614 6.1e-50 201.8 252 50.8
Solyc10g047220.2 Solanum lycopersicum HOM05D005104 ORTHO05D006614 6.1e-50 201.8 258 49.2
BcaB07g29727 Brassica carinata HOM05D005104 ORTHO05D006614 1.4e-49 200.7 257 49.8
CARHR278070 Cardamine hirsuta HOM05D005104 ORTHO05D006614 5.2e-49 198.7 256 49.6
SEGI_35517 Sequoiadendron giganteum HOM05D005104 ORTHO05D006614 5.2e-49 198.7 258 49.2
Rhsim05G0108500 Rhododendron simsii HOM05D005104 ORTHO05D006614 3.4e-48 196.1 192 57.8
Ciclev10029197m.g Citrus clementina HOM05D005104 ORTHO05D006614 7.5e-48 194.9 253 49.0
Carub.0008s2495 Capsella rubella HOM05D005104 ORTHO05D006614 9.7e-48 194.5 258 47.7
A06p30880 Brassica napus HOM05D005104 ORTHO05D006614 1.3e-47 194.1 254 49.2
Potri.003G023601 Populus trichocarpa HOM05D005104 ORTHO05D006614 3.7e-47 192.6 262 49.2
BcaC01g02673 Brassica carinata HOM05D005104 ORTHO05D006614 1.1e-46 191.0 254 48.4
C03p62090 Brassica napus HOM05D005104 ORTHO05D006614 2.4e-46 189.9 254 48.0
BolC3t18470H Brassica oleracea HOM05D005104 ORTHO05D006614 4.1e-46 189.1 254 48.0
Peaxi162Scf00003g03543 Petunia axillaris HOM05D005104 ORTHO05D006614 9.1e-46 188.0 255 49.0
MBI02_g08741_MAGBIO Magnolia biondii HOM05D005104 ORTHO05D006614 1.6e-45 187.2 136 71.3
Cc02_g21630 Coffea canephora HOM05D005104 ORTHO05D006614 3.5e-45 186.0 252 49.6
Aa31LG1G17770 Aethionema arabicum HOM05D005104 ORTHO05D006614 1.3e-44 184.1 265 46.0
BcaC02g09479 Brassica carinata HOM05D002012 ORTHO05D001992 1.3e-44 184.1 243 47.7
QL11p020542 Quercus lobata HOM05D005104 ORTHO05D006614 1.7e-44 183.7 286 44.4
Os02g0753200 Oryza sativa ssp. japonica HOM05D005104 ORTHO05D006614 2.5e-43 179.9 267 45.3
Hund06391 Selenicereus undatus HOM05D005104 ORTHO05D006614 4.2e-43 179.1 261 47.9
BolC9t58698H Brassica oleracea HOM05D005104 ORTHO05D006614 2.7e-42 176.4 259 44.4
GSVIVG01013334001 Vitis vinifera HOM05D005104 ORTHO05D006614 4.7e-42 175.6 138 65.2
GSVIVG01003087001 Vitis vinifera HOM05D005104 ORTHO05D006614 8.0e-42 174.9 138 65.2
C09p58340 Brassica napus HOM05D005104 ORTHO05D006614 1.0e-41 174.5 249 45.4
Ah.01g009520 Amaranthus hybridus HOM05D005104 ORTHO05D006614 1.8e-41 173.7 259 44.0
C09p58390 Brassica napus HOM05D005104 ORTHO05D006614 1.8e-41 173.7 248 45.6
Oeu026158.1 Olea europaea HOM05D005104 ORTHO05D006614 2.3e-41 173.3 253 46.2
Zm00001eb194200 Zea mays HOM05D005104 ORTHO05D006614 8.8e-41 171.4 267 44.2
Hma1.2p1_0522F.1_g171590 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 2.0e-40 170.2 216 50.0
Zm00001eb255190 Zea mays HOM05D005104 ORTHO05D006614 7.5e-40 168.3 267 44.9
C06p26800 Brassica napus HOM05D005104 ORTHO05D006614 9.8e-40 167.9 250 44.8
BolC6t37855H Brassica oleracea HOM05D005104 ORTHO05D006614 2.2e-39 166.8 250 44.8
Sabra01G0157800 Salix brachista HOM05D005104 ORTHO05D006614 2.2e-39 166.8 283 44.5
C02p46090 Brassica napus HOM05D005104 ORTHO05D006614 3.7e-39 166.0 252 44.4
BcaC08g45071 Brassica carinata HOM05D005104 ORTHO05D006614 6.3e-39 165.2 248 45.2
AUR62010117 Chenopodium quinoa HOM05D005104 ORTHO05D006614 3.1e-38 162.9 259 44.8
AUR62013112 Chenopodium quinoa HOM05D005104 ORTHO05D006614 9.1e-38 161.4 259 44.0
Lj5A240T40 Lonicera japonica HOM05D005104 ORTHO05D006614 1.6e-37 160.6 136 63.2
FAN24G3378 Fragaria x ananassa HOM05D005104 ORTHO05D006614 2.7e-37 159.8 138 66.7
BraA03t13815Z Brassica rapa HOM05D005104 ORTHO05D006614 1.0e-36 157.9 239 42.3
AagrBONN_evm.TU.Sc2ySwM_117.984 Anthoceros agrestis HOM05D005104 ORTHO05D006614 5.5e-35 152.1 252 41.7
Pp3c18_21190 Physcomitrium patens HOM05D005104 ORTHO05D006614 9.5e-35 151.4 254 42.1
GSVIVG01003093001 Vitis vinifera HOM05D005104 ORTHO05D006614 9.5e-35 151.4 120 64.2
Mapoly0096s0033 Marchantia polymorpha HOM05D005104 ORTHO05D006614 1.8e-33 147.1 264 39.0
Nitab4.5_0000078g0030 Nicotiana tabacum HOM05D005104 ORTHO05D006614 1.2e-29 134.4 268 40.7
SMO117G0229 Selaginella moellendorffii HOM05D005104 ORTHO05D006614 5.9e-29 132.1 201 41.8
unitig_22.g6836 Utricularia gibba HOM05D001058 ORTHO05D000911 8.6e-28 128.3 254 39.8
CDE10G1356 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 1.4e-25 120.9 186 44.6
Sc08g0003350 Simmondsia chinensis HOM05D005104 ORTHO05D006614 1.1e-22 111.3 139 46.8
BolC4t25904H Brassica oleracea HOM05D005104 ORTHO05D006614 1.9e-22 110.5 74 73.0
CAN.G1.36 Capsicum annuum HOM05D005104 ORTHO05D006614 1.2e-21 107.8 185 40.0
THA.LOC104818435 Tarenaya hassleriana HOM05D005104 ORTHO05D006614 2.5e-19 100.1 178 41.0
EL10Ac9g21466 Beta vulgaris HOM05D005104 ORTHO05D006614 1.8e-17 94.0 75 65.3
CBR_g47116 Chara braunii HOM05D005104 ORTHO05D006614 2.0e-16 90.5 219 34.7
Nitab4.5_0005015g0050 Nicotiana tabacum HOM05D005104 ORTHO05D006614 2.6e-16 90.1 168 41.1
Duzib132G1169 Durio zibethinus HOM05D005104 ORTHO05D006614 1.2e-08 64.7 142 38.0
EL10Ac9g21465 Beta vulgaris HOM05D005104 ORTHO05D006614 4.4e-08 62.8 130 36.9
Hma1.2p1_0516F.1_g170490 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 4.4e-08 62.8 136 38.2
A02p26040 Brassica napus HOM05D005104 ORTHO05D006614 3.7e-07 59.7 108 39.8


User provided reference genes

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