Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G4295 Papaver somniferum HOM05D005090 ORTHO05D006142 1.6e-92 342.8 180 100.0
PSO675G4571 Papaver somniferum HOM05D005090 ORTHO05D006142 1.5e-90 336.3 180 97.2
Aqoxy6G01237 Aquilegia oxysepala HOM05D005090 ORTHO05D006142 4.1e-56 221.9 149 74.5
TAR376G0388 Trochodendron aralioides HOM05D005090 ORTHO05D006142 5.5e-53 211.5 180 66.7
MBI16_g23060_MAGBIO Magnolia biondii HOM05D005090 ORTHO05D006142 1.4e-48 196.8 174 63.2
Actinidia01086 Actinidia chinensis HOM05D005090 ORTHO05D006142 1.8e-48 196.4 146 70.5
CANSAT25G3428 Cannabis sativa HOM05D005090 ORTHO05D006142 4.1e-48 195.3 144 69.4
GSVIVG01009445001 Vitis vinifera HOM05D005090 ORTHO05D006142 5.3e-48 194.9 168 63.7
Nn1g04760 Nelumbo nucifera HOM05D005090 ORTHO05D006142 1.2e-47 193.7 178 60.1
Actinidia22653 Actinidia chinensis HOM05D005090 ORTHO05D006142 7.7e-47 191.0 173 60.7
CANSAT56G0556 Cannabis sativa HOM05D005090 ORTHO05D006142 1.0e-46 190.7 182 58.2
Lj5g0006850 Lotus japonicus HOM05D005090 ORTHO05D006142 1.0e-46 190.7 169 61.5
Nn5g30374 Nelumbo nucifera HOM05D005090 ORTHO05D006142 1.0e-46 190.7 184 59.8
Ciclev10002608m.g Citrus clementina HOM05D005090 ORTHO05D006142 1.3e-46 190.3 180 57.2
Glyma.14G085300 Glycine max HOM05D005090 ORTHO05D006142 1.3e-46 190.3 143 65.7
Glyma.17G239400 Glycine max HOM05D005090 ORTHO05D006142 1.3e-46 190.3 143 65.7
Cfa009959 Carpinus fangiana HOM05D005090 ORTHO05D006142 3.8e-46 188.7 177 61.6
CiPaw.15G053600 Carya illinoinensis HOM05D005090 ORTHO05D006142 3.8e-46 188.7 174 61.5
Phvul.001G024300 Phaseolus vulgaris HOM05D005090 ORTHO05D006142 8.5e-46 187.6 174 56.9
Rhsim06G0054600 Rhododendron simsii HOM05D005090 ORTHO05D006142 1.1e-45 187.2 173 60.7
Oeu009772.1 Olea europaea HOM05D005090 ORTHO05D006142 5.5e-45 184.9 171 60.8
Atru.chr13.741 Acer truncatum HOM05D005090 ORTHO05D006142 7.2e-45 184.5 178 57.3
VMungo0647G1453 Vigna mungo HOM05D005090 ORTHO05D006142 9.4e-45 184.1 171 56.7
Gorai.010G022500 Gossypium raimondii HOM05D005090 ORTHO05D006142 1.2e-44 183.7 173 59.5
Prupe.1G431400 Prunus persica HOM05D005090 ORTHO05D006142 1.2e-44 183.7 142 65.5
Eucgr.F02314 Eucalyptus grandis HOM05D005090 ORTHO05D006142 2.1e-44 183.0 140 70.0
Manes.18G040700 Manihot esculenta HOM05D005090 ORTHO05D006142 2.1e-44 183.0 173 56.1
Duzib093G0455 Durio zibethinus HOM05D005090 ORTHO05D006142 2.7e-44 182.6 164 61.6
MD08G1095400 Malus domestica HOM05D005090 ORTHO05D006142 4.7e-44 181.8 177 57.6
Gohir.D06G019036 Gossypium hirsutum HOM05D005090 ORTHO05D006142 6.1e-44 181.4 180 57.8
Cpa.g.sc21.163 Carica papaya HOM05D005090 ORTHO05D006142 1.4e-43 180.3 176 61.4
Ca_13273_v3 Cicer arietinum L. HOM05D005090 ORTHO05D006142 4.0e-43 178.7 164 60.4
FvH4_2g33950 Fragaria vesca HOM05D005090 ORTHO05D006142 4.0e-43 178.7 181 58.6
FAN24G0633 Fragaria x ananassa HOM05D005090 ORTHO05D006142 4.0e-43 178.7 181 58.6
FAN27G2315 Fragaria x ananassa HOM05D005090 ORTHO05D006142 4.0e-43 178.7 181 59.1
Medtr1g018930 Medicago truncatula HOM05D005090 ORTHO05D006142 4.0e-43 178.7 164 62.8
FAN20G1047 Fragaria x ananassa HOM05D005090 ORTHO05D006142 6.7e-43 177.9 181 59.1
CAN.G1030.34 Capsicum annuum HOM05D005090 ORTHO05D006142 8.8e-43 177.6 157 59.2
Potri.014G024500 Populus trichocarpa HOM05D005090 ORTHO05D006142 8.8e-43 177.6 178 58.4
Nitab4.5_0004730g0030 Nicotiana tabacum HOM05D005090 ORTHO05D006142 1.2e-42 177.2 151 62.9
MSTRG.1060 Avicennia marina HOM05D005090 ORTHO05D006142 2.0e-42 176.4 174 56.9
MD15G1077900 Malus domestica HOM05D005090 ORTHO05D006142 2.0e-42 176.4 173 57.8
Sabra14G0016700 Salix brachista HOM05D005090 ORTHO05D006142 2.0e-42 176.4 180 55.6
TWI36G0811 Tripterygium wilfordii HOM05D005090 ORTHO05D006142 2.0e-42 176.4 177 58.8
DCAR_019423 Daucus carota HOM05D005090 ORTHO05D006142 2.6e-42 176.0 172 58.1
FAN15G0851 Fragaria x ananassa HOM05D005090 ORTHO05D006142 3.3e-42 175.6 181 58.6
Sed0019095 Sechium edule HOM05D005090 ORTHO05D006142 4.4e-42 175.3 144 62.5
Lalb_Chr22g0354971 Lupinus albus HOM05D005090 ORTHO05D006142 9.7e-42 174.1 140 63.6
ATR0762G034 Amborella trichopoda HOM05D005090 ORTHO05D006142 1.3e-41 173.7 149 61.1
CSS0005413 Camellia sinensis var. sinensis HOM05D005090 ORTHO05D006142 1.3e-41 173.7 180 56.1
AUR62036618 Chenopodium quinoa HOM05D005090 ORTHO05D006142 1.3e-41 173.7 148 62.8
ClCG05G020140 Citrullus lanatus HOM05D005090 ORTHO05D006142 1.3e-41 173.7 180 56.7
RcHm_v2.0_Chr6g0308461 Rosa chinensis HOM05D005090 ORTHO05D006142 1.3e-41 173.7 183 56.3
Sc15g0005920 Simmondsia chinensis HOM05D005090 ORTHO05D006142 1.7e-41 173.3 147 63.3
Peaxi162Scf00121g00414 Petunia axillaris HOM05D005090 ORTHO05D006142 2.2e-41 172.9 182 54.4
Sopen04g032180 Solanum pennellii HOM05D005090 ORTHO05D006142 4.8e-41 171.8 180 53.3
Nitab4.5_0002548g0010 Nicotiana tabacum HOM05D005090 ORTHO05D006142 8.2e-41 171.0 184 53.3
Potri.002G123400 Populus trichocarpa HOM05D005090 ORTHO05D006142 8.2e-41 171.0 176 54.5
Solyc04g078600.3 Solanum lycopersicum HOM05D005090 ORTHO05D006142 1.1e-40 170.6 180 53.9
Haze_18058 Corylus avellana HOM05D005090 ORTHO05D006142 1.4e-40 170.2 124 68.5
Haze_18064 Corylus avellana HOM05D005090 ORTHO05D006142 1.4e-40 170.2 124 68.5
arahy.Tifrunner.gnm1.ann1.LLUM42 Arachis hypogaea HOM05D005090 ORTHO05D006142 2.4e-40 169.5 179 54.2
arahy.Tifrunner.gnm1.ann1.Q1327U Arachis hypogaea HOM05D005090 ORTHO05D006142 2.4e-40 169.5 179 54.2
Duzib041G0676 Durio zibethinus HOM05D005090 ORTHO05D006142 3.1e-40 169.1 169 55.6
MELO3C016776.2 Cucumis melo HOM05D005090 ORTHO05D006142 5.3e-40 168.3 146 59.6
Cc10_g04780 Coffea canephora HOM05D005090 ORTHO05D006142 1.6e-39 166.8 142 60.6
Psat6g014640 Pisum sativum HOM05D005090 ORTHO05D006142 1.6e-39 166.8 164 58.5
Manes.05G176500 Manihot esculenta HOM05D005090 ORTHO05D006142 2.0e-39 166.4 124 67.7
PGSC0003DMG400007949 Solanum tuberosum HOM05D005090 ORTHO05D006142 2.0e-39 166.4 181 53.0
Aa31LG3G14010 Aethionema arabicum HOM05D005090 ORTHO05D006142 2.7e-39 166.0 147 59.2
BolC2t11671H Brassica oleracea HOM05D005090 ORTHO05D006142 2.7e-39 166.0 176 54.0
Carub.0008s0737 Capsella rubella HOM05D005090 ORTHO05D006142 3.5e-39 165.6 170 54.7
PGR031G1041 Punica granatum HOM05D005090 ORTHO05D006142 5.9e-39 164.9 143 60.8
EL10As7g23773 Beta vulgaris HOM05D005090 ORTHO05D006142 7.7e-39 164.5 147 59.9
A02p37140 Brassica napus HOM05D005090 ORTHO05D006142 7.7e-39 164.5 174 54.0
BraA02t08700Z Brassica rapa HOM05D005090 ORTHO05D006142 7.7e-39 164.5 174 54.0
BcaC03g17615 Brassica carinata HOM05D005090 ORTHO05D006142 1.3e-38 163.7 175 53.1
SEGI_34157 Sequoiadendron giganteum HOM05D005090 ORTHO05D006142 1.3e-38 163.7 147 59.9
Sp2g18330 Schrenkiella parvula HOM05D005090 ORTHO05D006142 1.7e-38 163.3 146 58.2
A06p39530 Brassica napus HOM05D005090 ORTHO05D006142 2.2e-38 162.9 171 54.4
C02p56140 Brassica napus HOM05D005090 ORTHO05D006142 2.9e-38 162.5 175 53.1
BraA06t26868Z Brassica rapa HOM05D005090 ORTHO05D006142 2.9e-38 162.5 171 54.4
Thhalv10005720m.g Eutrema salsugineum HOM05D005090 ORTHO05D006142 2.9e-38 162.5 147 57.8
SalBow7G1773 Salvia bowleyana HOM05D005090 ORTHO05D006142 3.8e-38 162.2 178 52.2
Duzib116G0889 Durio zibethinus HOM05D005090 ORTHO05D006142 6.5e-38 161.4 180 55.6
Sed0001046 Sechium edule HOM05D005090 ORTHO05D006142 6.5e-38 161.4 167 55.7
CDE06G1995 Ceratophyllum demersum HOM05D005090 ORTHO05D006142 8.5e-38 161.0 172 53.5
HanXRQChr04g0103471 Helianthus annuus HOM05D005090 ORTHO05D006142 1.1e-37 160.6 157 56.1
THA.LOC104807114 Tarenaya hassleriana HOM05D005090 ORTHO05D006142 1.1e-37 160.6 149 56.4
AT5G47830 Arabidopsis thaliana HOM05D005090 ORTHO05D006142 1.5e-37 160.2 172 52.3
C07p38740 Brassica napus HOM05D005090 ORTHO05D006142 1.9e-37 159.8 175 52.0
BolC7t44393H Brassica oleracea HOM05D005090 ORTHO05D006142 1.9e-37 159.8 175 52.0
CARHR184350 Cardamine hirsuta HOM05D005090 ORTHO05D006142 1.9e-37 159.8 167 54.5
Hund05334 Selenicereus undatus HOM05D005090 ORTHO05D006142 1.9e-37 159.8 189 52.9
AL8G19800 Arabidopsis lyrata HOM05D005090 ORTHO05D006142 3.2e-37 159.1 174 53.4
BcaB07g30052 Brassica carinata HOM05D005090 ORTHO05D006142 5.5e-37 158.3 174 51.1
HanXRQChr05g0150671 Helianthus annuus HOM05D005090 ORTHO05D006142 1.2e-36 157.1 168 51.2
Lj4C63T3 Lonicera japonica HOM05D005090 ORTHO05D006142 1.2e-36 157.1 121 63.6
Hma1.2p1_0634F.1_g193080 Hydrangea macrophylla HOM05D005090 ORTHO05D006142 2.1e-36 156.4 180 51.1
Hma1.2p1_0360F.1_g135840 Hydrangea macrophylla HOM05D005090 ORTHO05D006142 3.6e-36 155.6 175 53.7
Lsat_1_v5_gn_1_22101 Lactuca sativa HOM05D005090 ORTHO05D006142 8.0e-36 154.5 185 49.7
Thecc.08G002400 Theobroma cacao HOM05D005090 ORTHO05D006142 1.0e-35 154.1 171 52.6
Zm00001eb232600 Zea mays HOM05D005090 ORTHO05D006142 1.0e-35 154.1 141 56.7
Os02g0158600 Oryza sativa ssp. japonica HOM05D005090 ORTHO05D006142 1.8e-35 153.3 144 54.9
unitig_26.g9810 Utricularia gibba HOM05D005090 ORTHO05D006142 3.0e-35 152.5 150 57.3
AUR62038807 Chenopodium quinoa HOM05D005090 ORTHO05D006142 4.0e-35 152.1 139 59.0
COL.COLO4_10129 Corchorus olitorius HOM05D005090 ORTHO05D006142 6.8e-35 151.4 196 48.0
SGA_v2.0_scaffold197G41030 Striga asiatica HOM05D005090 ORTHO05D006142 1.2e-34 150.6 201 45.3
Oeu037620.1 Olea europaea HOM05D005090 ORTHO05D006142 4.4e-34 148.7 123 57.7
MD17G1062600 Malus domestica HOM05D005090 ORTHO05D006142 9.8e-34 147.5 138 58.7
ECA246G0692 Erigeron canadensis HOM05D005090 ORTHO05D006142 6.3e-33 144.8 173 48.0
ECA247G1795 Erigeron canadensis HOM05D005090 ORTHO05D006142 1.1e-32 144.1 135 55.6
Migut.C00536 Erythranthe guttata HOM05D005090 ORTHO05D006142 3.1e-32 142.5 145 55.9
TAR628G0694 Trochodendron aralioides HOM05D005090 ORTHO05D006142 1.2e-31 140.6 116 65.5
Nitab4.5_0012973g0030 Nicotiana tabacum HOM05D005090 ORTHO05D006142 2.0e-31 139.8 124 57.3
Pp3c14_4680 Physcomitrium patens HOM05D005090 ORTHO05D006142 2.0e-31 139.8 151 49.7
Pp3c14_4740 Physcomitrium patens HOM05D005090 ORTHO05D006142 2.0e-31 139.8 151 49.7
EL10As7g23770 Beta vulgaris HOM05D005090 ORTHO05D006142 6.5e-30 134.8 149 51.0
BcaB05g23208 Brassica carinata HOM05D005090 ORTHO05D006142 1.5e-29 133.7 127 53.5
BcaB04g18280 Brassica carinata HOM05D005090 ORTHO05D006142 1.9e-29 133.3 119 56.3
Pp3c10_3910 Physcomitrium patens HOM05D005090 ORTHO05D006142 1.8e-27 126.7 155 46.5
AagrBONN_evm.TU.Sc2ySwM_340.334 Anthoceros agrestis HOM05D005090 ORTHO05D006142 7.5e-26 121.3 140 47.9
Mapoly0121s0046 Marchantia polymorpha HOM05D005090 ORTHO05D006142 9.8e-26 120.9 174 41.4
EL10As7g23766 Beta vulgaris HOM05D005090 ORTHO05D006142 2.8e-25 119.4 126 52.4
EL10As7g23771 Beta vulgaris HOM05D005090 ORTHO05D006142 2.8e-25 119.4 126 52.4
Nitab4.5_0005621g0060 Nicotiana tabacum HOM05D005090 ORTHO05D006142 2.8e-25 119.4 105 59.0
vmacro04554 Vaccinium macrocarpon HOM05D005090 ORTHO05D006142 4.1e-24 115.5 249 34.9
SMO140G0004 Selaginella moellendorffii HOM05D002426 ORTHO05D002873 1.9e-21 106.7 176 40.3
Sc02g0007470 Simmondsia chinensis HOM05D005090 ORTHO05D006142 6.1e-20 101.7 136 41.9
CsaV3_4G034590 Cucumis sativus L. HOM05D005090 ORTHO05D006142 4.0e-19 99.0 180 39.4
EL10As7g23765 Beta vulgaris HOM05D005090 ORTHO05D006142 1.3e-17 94.0 108 50.9
BcaB01g00393 Brassica carinata HOM05D005090 ORTHO05D006142 1.3e-17 94.0 102 48.0
AUR62044449 Chenopodium quinoa HOM05D005090 ORTHO05D006142 2.2e-17 93.2 113 50.4
CBR_g12766 Chara braunii HOM05D005090 ORTHO05D006142 1.4e-16 90.5 169 39.1
BcaC02g09103 Brassica carinata HOM05D005090 ORTHO05D006142 1.1e-11 74.3 84 50.0
BcaC03g17171 Brassica carinata HOM05D005090 ORTHO05D006142 8.9e-11 71.2 84 50.0
BolC2t11185H Brassica oleracea HOM05D005090 ORTHO05D006142 8.9e-11 71.2 84 50.0
C04p38460 Brassica napus HOM05D005090 ORTHO05D006142 1.2e-10 70.9 84 48.8
BolC6t37479H Brassica oleracea HOM05D005090 ORTHO05D006142 4.4e-10 68.9 84 47.6
C02p38970 Brassica napus HOM05D005090 ORTHO05D006142 4.9e-09 65.5 84 45.2
BolC2t09908H Brassica oleracea HOM05D005090 ORTHO05D006142 4.9e-09 65.5 84 45.2
MD06G1210300 Malus domestica HOM05D005090 ORTHO05D006142 1.4e-08 63.9 83 47.0
Sabra02G0096900 Salix brachista HOM05D005090 ORTHO05D006142 1.9e-08 63.5 58 55.2
Sabra02G0096800 Salix brachista HOM05D005090 ORTHO05D006142 4.1e-08 62.4 55 60.0


User provided reference genes

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