Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G4271 Papaver somniferum HOM05D004795 ORTHO05D005518 3.3e-81 305.4 209 100.0
PSO541G1476 Papaver somniferum HOM05D004795 ORTHO05D005518 3.9e-74 282.0 210 87.6
PSO532G0010 Papaver somniferum HOM05D004795 ORTHO05D005518 4.0e-71 271.9 209 88.0
Sabra04G0081300 Salix brachista HOM05D004795 ORTHO05D005518 5.1e-18 95.5 150 41.3
COL.COLO4_09348 Corchorus olitorius HOM05D004795 ORTHO05D005518 8.2e-16 88.2 154 42.2
ClCG05G012330 Citrullus lanatus HOM05D004795 ORTHO05D005518 2.4e-15 86.7 157 40.1
CsaV3_3G020240 Cucumis sativus L. HOM05D004795 ORTHO05D005518 2.4e-15 86.7 158 39.2
MELO3C023735.2 Cucumis melo HOM05D004795 ORTHO05D005518 1.2e-14 84.3 162 37.7
Dinv33956 Davidia involucrata HOM05D001490 ORTHO05D001450 1.2e-14 84.3 157 38.2
Glyma.08G366700 Glycine max HOM05D004795 ORTHO05D005518 2.0e-14 83.6 158 41.8
Phvul.008G007200 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 2.0e-14 83.6 164 40.9
PGR042G3836 Punica granatum HOM05D004795 ORTHO05D005518 3.4e-14 82.8 156 38.5
Atru.chr1.1662 Acer truncatum HOM05D004795 ORTHO05D005518 4.5e-14 82.4 152 39.5
Aqoxy3G00247 Aquilegia oxysepala HOM05D004795 ORTHO05D005518 4.5e-14 82.4 158 55.7
VMungo1383G1737 Vigna mungo HOM05D004795 ORTHO05D005518 4.5e-14 82.4 167 41.3
TWI77G0518 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 5.8e-14 82.0 156 39.1
Peaxi162Scf00394g00712 Petunia axillaris HOM05D004795 ORTHO05D005518 7.6e-14 81.6 158 36.1
Cfa007915 Carpinus fangiana HOM05D004795 ORTHO05D005518 1.0e-13 81.3 166 38.6
DCAR_025909 Daucus carota HOM05D004795 ORTHO05D005518 1.0e-13 81.3 169 35.5
Glyma.18G295700 Glycine max HOM05D004795 ORTHO05D005518 1.3e-13 80.9 166 38.0
Sabra17G0096100 Salix brachista HOM05D004795 ORTHO05D005518 1.3e-13 80.9 157 48.4
Sopen02g030830 Solanum pennellii HOM05D004795 ORTHO05D005518 1.3e-13 80.9 160 37.5
Manes.01G111300 Manihot esculenta HOM05D004795 ORTHO05D005518 1.7e-13 80.5 149 36.9
Thecc.04G132300 Theobroma cacao HOM05D004795 ORTHO05D005518 2.2e-13 80.1 152 38.8
TAR629G1480 Trochodendron aralioides HOM05D004795 ORTHO05D005518 2.2e-13 80.1 159 38.4
Duzib133G0847 Durio zibethinus HOM05D004795 ORTHO05D005518 2.9e-13 79.7 152 38.8
SGA_v2.0_scaffold115G32104 Striga asiatica HOM05D004795 ORTHO05D005518 2.9e-13 79.7 156 35.9
CiPaw.03G062800 Carya illinoinensis HOM05D004795 ORTHO05D005518 3.8e-13 79.3 163 38.7
CiPaw.04G043000 Carya illinoinensis HOM05D004795 ORTHO05D005518 3.8e-13 79.3 172 38.4
Duzib138G0938 Durio zibethinus HOM05D004795 ORTHO05D005518 3.8e-13 79.3 154 37.7
Potri.017G116100 Populus trichocarpa HOM05D004795 ORTHO05D005518 3.8e-13 79.3 157 49.7
QL02p051034 Quercus lobata HOM05D004795 ORTHO05D005518 3.8e-13 79.3 155 38.1
QL12p016552 Quercus lobata HOM05D004795 ORTHO05D005518 3.8e-13 79.3 155 38.1
arahy.Tifrunner.gnm1.ann1.HZ9SBP Arachis hypogaea HOM05D001490 ORTHO05D005518 8.4e-13 78.2 166 37.3
CANSAT78G0274 Cannabis sativa HOM05D004795 ORTHO05D005518 1.1e-12 77.8 158 39.2
Rhsim10G0068600 Rhododendron simsii HOM05D004795 ORTHO05D005518 1.1e-12 77.8 158 34.2
Nitab4.5_0000912g0060 Nicotiana tabacum HOM05D004795 ORTHO05D005518 1.4e-12 77.4 158 34.8
CAN.G625.30 Capsicum annuum HOM05D004795 ORTHO05D005518 1.9e-12 77.0 163 35.6
MD17G1245500 Malus domestica HOM05D004795 ORTHO05D005518 2.5e-12 76.6 157 36.3
TAR622G0902 Trochodendron aralioides HOM05D004795 ORTHO05D005518 2.5e-12 76.6 158 37.3
RcHm_v2.0_Chr2g0148201 Rosa chinensis HOM05D004795 ORTHO05D005518 3.2e-12 76.3 154 35.7
PGSC0003DMG402026390 Solanum tuberosum HOM05D004795 ORTHO05D005518 4.2e-12 75.9 160 36.9
Duzib211G0180 Durio zibethinus HOM05D004795 ORTHO05D005518 5.5e-12 75.5 151 38.4
Medtr6g018780 Medicago truncatula HOM05D004795 ORTHO05D005518 5.5e-12 75.5 92 54.3
Prupe.3G143600 Prunus persica HOM05D004795 ORTHO05D005518 5.5e-12 75.5 157 38.2
MBI09_g36997_MAGBIO Magnolia biondii HOM05D004795 ORTHO05D005518 7.1e-12 75.1 156 37.8
FAN09G4185 Fragaria x ananassa HOM05D004795 ORTHO05D005518 9.3e-12 74.7 153 37.9
Gohir.D11G325800 Gossypium hirsutum HOM05D004795 ORTHO05D005518 9.3e-12 74.7 155 35.5
Thhalv10027906m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 1.2e-11 74.3 161 37.9
Ah.16g101690 Amaranthus hybridus HOM05D004795 ORTHO05D005518 1.6e-11 73.9 161 33.5
Oeu016627.1 Olea europaea HOM05D004795 ORTHO05D005518 1.6e-11 73.9 152 36.2
PGR004G2449 Punica granatum HOM05D004795 ORTHO05D005518 1.6e-11 73.9 165 34.5
Gohir.D11G326300 Gossypium hirsutum HOM05D004795 ORTHO05D005518 2.1e-11 73.6 155 34.8
HanXRQChr11g0330661 Helianthus annuus HOM05D004795 ORTHO05D005518 2.7e-11 73.2 156 34.6
Oeu039734.1 Olea europaea HOM05D004795 ORTHO05D005518 2.7e-11 73.2 159 34.0
Glyma.13G045200 Glycine max HOM05D004795 ORTHO05D005518 3.5e-11 72.8 151 37.1
MD09G1253700 Malus domestica HOM05D004795 ORTHO05D005518 3.5e-11 72.8 162 35.8
Manes.02G069600 Manihot esculenta HOM05D004795 ORTHO05D005518 3.5e-11 72.8 150 35.3
TWI53G1522 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 3.5e-11 72.8 164 35.4
CARHR059450 Cardamine hirsuta HOM05D004795 ORTHO05D005518 4.6e-11 72.4 159 40.3
Cpa.g.sc170.57 Carica papaya HOM05D004795 ORTHO05D005518 4.6e-11 72.4 160 36.2
Sed0015257 Sechium edule HOM05D004795 ORTHO05D005518 4.6e-11 72.4 158 38.0
THA.LOC104822635 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 4.6e-11 72.4 211 34.6
Gohir.D11G325700 Gossypium hirsutum HOM05D004795 ORTHO05D005518 6.1e-11 72.0 155 34.8
Lsat_1_v5_gn_4_154580 Lactuca sativa HOM05D004795 ORTHO05D005518 6.1e-11 72.0 153 33.3
AT5G38300 Arabidopsis thaliana HOM05D004795 ORTHO05D005518 7.9e-11 71.6 83 54.2
C02p22330 Brassica napus HOM05D004795 ORTHO05D005518 7.9e-11 71.6 167 35.9
FvH4_6g36230 Fragaria vesca HOM05D004795 ORTHO05D005518 7.9e-11 71.6 152 36.8
FAN14G2363 Fragaria x ananassa HOM05D004795 ORTHO05D005518 7.9e-11 71.6 152 36.8
FAN14G5069 Fragaria x ananassa HOM05D004795 ORTHO05D005518 7.9e-11 71.6 152 36.8
Haze_14167 Corylus avellana HOM05D004795 ORTHO05D005518 1.0e-10 71.2 171 35.7
Ca_08078_v3 Cicer arietinum L. HOM05D004795 ORTHO05D005518 1.3e-10 70.9 165 33.3
Ciclev10012794m.g Citrus clementina HOM05D004795 ORTHO05D005518 1.8e-10 70.5 152 36.2
Cc07_g08730 Coffea canephora HOM05D004795 ORTHO05D005518 1.8e-10 70.5 173 34.1
Sc11g0008370 Simmondsia chinensis HOM05D004795 ORTHO05D005518 1.8e-10 70.5 151 35.1
MSTRG.3555 Avicennia marina HOM05D004795 ORTHO05D005518 2.3e-10 70.1 159 33.3
Gohir.A11G163900 Gossypium hirsutum HOM05D004795 ORTHO05D005518 2.3e-10 70.1 153 33.3
Nn3g17899 Nelumbo nucifera HOM05D004795 ORTHO05D005518 2.3e-10 70.1 153 35.9
TAR371G0696 Trochodendron aralioides HOM05D004795 ORTHO05D005518 2.3e-10 70.1 157 36.3
VMungo0464G1679 Vigna mungo HOM05D004795 ORTHO05D005518 2.3e-10 70.1 155 37.4
BraA02t06447Z Brassica rapa HOM05D004795 ORTHO05D005518 3.9e-10 69.3 163 38.0
FAN05G2248 Fragaria x ananassa HOM05D004795 ORTHO05D005518 5.1e-10 68.9 152 37.5
Gorai.007G182000 Gossypium raimondii HOM05D004795 ORTHO05D005518 5.1e-10 68.9 163 31.9
FAN02G3195 Fragaria x ananassa HOM05D004795 ORTHO05D005518 6.7e-10 68.6 152 37.5
CARHR214290 Cardamine hirsuta HOM05D004795 ORTHO05D005518 8.7e-10 68.2 169 44.4
BcaB05g24226 Brassica carinata HOM05D004795 ORTHO05D005518 1.9e-09 67.0 170 35.3
Psat3g098240 Pisum sativum HOM05D004795 ORTHO05D005518 1.9e-09 67.0 165 32.1
ECA232G0641 Erigeron canadensis HOM05D000072 ORTHO05D000026 3.3e-09 66.2 83 47.0
AL2G25370 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 4.3e-09 65.9 165 34.5
Carub.0002s1332 Capsella rubella HOM05D004795 ORTHO05D005518 4.3e-09 65.9 161 34.8
BraA07t31003Z Brassica rapa HOM05D004795 ORTHO05D005518 5.7e-09 65.5 161 34.8
Eucgr.J01506 Eucalyptus grandis HOM05D004795 ORTHO05D005518 7.4e-09 65.1 155 33.5
A07p33770 Brassica napus HOM05D004795 ORTHO05D005518 9.7e-09 64.7 162 35.8
Oeu050378.1 Olea europaea HOM05D004795 ORTHO05D005518 9.7e-09 64.7 153 34.6
Solyc02g086140.2 Solanum lycopersicum HOM05D004795 ORTHO05D005518 9.7e-09 64.7 83 51.8
AT1G67035 Arabidopsis thaliana HOM05D004795 ORTHO05D005518 1.3e-08 64.3 161 34.2
TPR.G32442 Trifolium pratense HOM05D004795 ORTHO05D005518 1.3e-08 64.3 92 50.0
AL7G52500 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 1.6e-08 63.9 120 49.2
BcaC03g14785 Brassica carinata HOM05D004795 ORTHO05D005518 2.2e-08 63.5 170 35.9
Thhalv10019032m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 2.8e-08 63.2 84 50.0
Sp5g21970 Schrenkiella parvula HOM05D004795 ORTHO05D005518 2.8e-08 63.2 174 36.8
THA.LOC104805574 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 2.8e-08 63.2 182 31.3
TPR.G31528 Trifolium pratense HOM05D004795 ORTHO05D005518 2.8e-08 63.2 171 31.6
BolC6t39123H Brassica oleracea HOM05D004795 ORTHO05D005518 3.7e-08 62.8 170 33.5
BcaB06g27183 Brassica carinata HOM05D004795 ORTHO05D005518 6.3e-08 62.0 167 32.9
A04p11270 Brassica napus HOM05D004795 ORTHO05D005518 6.3e-08 62.0 169 32.5
BraA04t16787Z Brassica rapa HOM05D004795 ORTHO05D005518 6.3e-08 62.0 169 32.5
HanXRQChr11g0325401 Helianthus annuus HOM05D004795 ORTHO05D005518 6.3e-08 62.0 159 34.0
BcaC02g09641 Brassica carinata HOM05D004795 ORTHO05D005518 1.1e-07 61.2 169 32.5
BolC2t08386H Brassica oleracea HOM05D004795 ORTHO05D005518 1.1e-07 61.2 167 35.3
BolC4t26077H Brassica oleracea HOM05D004795 ORTHO05D005518 1.1e-07 61.2 169 32.5
Glyma.19G049900 Glycine max HOM05D004795 ORTHO05D005518 1.1e-07 61.2 152 34.2
Aa31LG9G17140 Aethionema arabicum HOM05D004795 ORTHO05D005518 1.4e-07 60.8 167 34.1
Gorai.007G356700 Gossypium raimondii HOM05D004795 ORTHO05D005518 1.8e-07 60.5 144 34.0
AUR62023290 Chenopodium quinoa HOM05D004795 ORTHO05D005518 3.1e-07 59.7 89 46.1
Carub.0005s1274 Capsella rubella HOM05D004795 ORTHO05D005518 4.1e-07 59.3 175 34.3
Gohir.D11G170200 Gossypium hirsutum HOM05D004795 ORTHO05D005518 4.1e-07 59.3 86 45.3
C04p44990 Brassica napus HOM05D004795 ORTHO05D005518 6.9e-07 58.5 173 31.8
SalBow5G0757 Salvia bowleyana HOM05D004795 ORTHO05D005518 9.0e-07 58.2 83 44.6
Sp7g03720 Schrenkiella parvula HOM05D004795 ORTHO05D005518 9.0e-07 58.2 168 33.9
AUR62009011 Chenopodium quinoa HOM05D004795 ORTHO05D005518 1.2e-06 57.8 89 44.9
AUR62043981 Chenopodium quinoa HOM05D004795 ORTHO05D005518 1.2e-06 57.8 89 44.9
Lj1g0003158 Lotus japonicus HOM05D004795 ORTHO05D005518 1.5e-06 57.4 157 31.8
Lalb_Chr10g0091311 Lupinus albus HOM05D004795 ORTHO05D005518 2.6e-06 56.6 156 30.8
Phvul.004G066100 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 4.5e-06 55.8 153 34.6
C06p43160 Brassica napus HOM05D004795 ORTHO05D005518 5.9e-06 55.5 167 32.3
Nitab4.5_0004416g0090 Nicotiana tabacum HOM05D004795 ORTHO05D005518 1.0e-05 54.7 127 33.1


User provided reference genes

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