Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G4219 Papaver somniferum HOM05D003137 ORTHO05D003433 4.7e-194 681.0 344 100.0
PSO478G2847 Papaver somniferum HOM05D003137 ORTHO05D003433 1.9e-38 164.1 327 35.8
THA.LOC104800980 Tarenaya hassleriana HOM05D003137 ORTHO05D003433 4.8e-21 106.3 293 29.4
Thhalv10016614m.g Eutrema salsugineum HOM05D003137 ORTHO05D003433 1.8e-20 104.4 286 29.4
AT2G32295 Arabidopsis thaliana HOM05D003137 ORTHO05D003433 5.3e-20 102.8 293 29.0
BolC3t14499H Brassica oleracea HOM05D003137 ORTHO05D003433 6.9e-20 102.4 286 29.0
CARHR126140 Cardamine hirsuta HOM05D003137 ORTHO05D003433 9.0e-20 102.1 260 31.5
BcaC01g05910 Brassica carinata HOM05D003137 ORTHO05D003433 1.2e-19 101.7 286 29.0
A03p18130 Brassica napus HOM05D003137 ORTHO05D003433 1.2e-19 101.7 286 29.0
C03p21160 Brassica napus HOM05D003137 ORTHO05D003433 1.2e-19 101.7 286 29.0
BraA03t11072Z Brassica rapa HOM05D003137 ORTHO05D003433 1.2e-19 101.7 286 29.0
Carub.0004s1367 Capsella rubella HOM05D003137 ORTHO05D003433 1.2e-19 101.7 290 28.6
AL4G27690 Arabidopsis lyrata HOM05D003137 ORTHO05D003433 2.0e-19 100.9 221 33.5
Sp4g14700 Schrenkiella parvula HOM05D003137 ORTHO05D003433 2.0e-19 100.9 286 28.7
Cfa014440 Carpinus fangiana HOM05D003137 ORTHO05D003433 4.5e-19 99.8 267 30.7
Mapoly0060s0006 Marchantia polymorpha HOM05D003137 ORTHO05D003433 5.8e-19 99.4 293 28.7
BcaB01g03986 Brassica carinata HOM05D003137 ORTHO05D003433 9.9e-19 98.6 286 28.7
Cc10_g03200 Coffea canephora HOM05D003137 ORTHO05D003433 8.4e-18 95.5 220 31.8
CsaV3_4G029720 Cucumis sativus L. HOM05D003137 ORTHO05D003433 8.4e-18 95.5 263 31.2
MSTRG.25153 Avicennia marina HOM05D003137 ORTHO05D003433 1.1e-17 95.1 294 27.9
Potri.017G039000 Populus trichocarpa HOM05D003137 ORTHO05D003433 1.4e-17 94.7 265 28.7
Glyma.13G306500 Glycine max HOM05D003137 ORTHO05D003433 1.9e-17 94.4 303 29.7
PSO478G0754 Papaver somniferum HOM05D003137 ORTHO05D003433 1.9e-17 94.4 258 29.8
CANSAT64G2088 Cannabis sativa HOM05D003137 ORTHO05D003433 2.4e-17 94.0 263 30.0
MELO3C019066.2 Cucumis melo HOM05D003137 ORTHO05D003433 2.4e-17 94.0 263 30.8
MD09G1104800 Malus domestica HOM05D003137 ORTHO05D003433 2.4e-17 94.0 264 29.9
Potri.007G121400 Populus trichocarpa HOM05D003137 ORTHO05D003433 2.4e-17 94.0 265 30.2
Ciclev10015128m.g Citrus clementina HOM05D003137 ORTHO05D003433 4.2e-17 93.2 263 29.7
Duzib138G0678 Durio zibethinus HOM05D003137 ORTHO05D003433 4.2e-17 93.2 259 29.7
MD17G1092500 Malus domestica HOM05D003137 ORTHO05D003433 5.5e-17 92.8 263 29.3
Phvul.005G113400 Phaseolus vulgaris HOM05D003137 ORTHO05D003433 5.5e-17 92.8 297 30.0
unitig_46.g17923 Utricularia gibba HOM05D001026 ORTHO05D005232 5.5e-17 92.8 299 27.8
ECA233G5037 Erigeron canadensis HOM05D003137 ORTHO05D003433 7.1e-17 92.4 308 27.6
Medtr7g076560 Medicago truncatula HOM05D003137 ORTHO05D003433 7.1e-17 92.4 258 29.8
FAN02G1637 Fragaria x ananassa HOM05D003137 ORTHO05D003433 9.3e-17 92.0 271 29.2
VMungo1080G0481 Vigna mungo HOM05D003137 ORTHO05D003433 9.3e-17 92.0 234 30.3
CSS0047433 Camellia sinensis var. sinensis HOM05D003137 ORTHO05D003433 1.6e-16 91.3 263 28.1
Eucgr.K00863 Eucalyptus grandis HOM05D003137 ORTHO05D003433 1.6e-16 91.3 263 29.3
CiPaw.03G163200 Carya illinoinensis HOM05D003137 ORTHO05D003433 2.1e-16 90.9 264 31.1
ClCG04G004390 Citrullus lanatus HOM05D003137 ORTHO05D003433 2.1e-16 90.9 328 27.4
GSVIVG01030627001 Vitis vinifera HOM05D003137 ORTHO05D003433 2.1e-16 90.9 264 28.8
Prupe.2G153500 Prunus persica HOM05D003137 ORTHO05D003433 2.7e-16 90.5 257 28.8
Gohir.D11G088700 Gossypium hirsutum HOM05D003137 ORTHO05D003433 3.5e-16 90.1 258 28.3
Gorai.007G094800 Gossypium raimondii HOM05D003137 ORTHO05D003433 3.5e-16 90.1 258 28.3
Prupe.3G220700 Prunus persica HOM05D003137 ORTHO05D003433 3.5e-16 90.1 263 29.3
PGR042G2833 Punica granatum HOM05D003137 ORTHO05D003433 3.5e-16 90.1 258 31.4
Glyma.18G228400 Glycine max HOM05D003137 ORTHO05D003433 4.6e-16 89.7 257 29.2
Lsat_1_v5_gn_8_129381 Lactuca sativa HOM05D003137 ORTHO05D003433 4.6e-16 89.7 307 26.7
Sopen04g033640 Solanum pennellii HOM05D003137 ORTHO05D003433 4.6e-16 89.7 221 30.8
Gohir.A11G084600 Gossypium hirsutum HOM05D003137 ORTHO05D003433 6.0e-16 89.4 260 28.5
Lj8A37T39 Lonicera japonica HOM05D003137 ORTHO05D003433 6.0e-16 89.4 221 30.8
Dinv39684 Davidia involucrata HOM05D003137 ORTHO05D003433 7.9e-16 89.0 265 28.3
FAN09G4236 Fragaria x ananassa HOM05D003137 ORTHO05D003433 7.9e-16 89.0 214 30.8
Gorai.008G116200 Gossypium raimondii HOM05D003137 ORTHO05D003433 7.9e-16 89.0 262 31.3
Hma1.2p1_0613F.1_g189210 Hydrangea macrophylla HOM05D003137 ORTHO05D003433 7.9e-16 89.0 259 30.1
Nitab4.5_0003246g0110 Nicotiana tabacum HOM05D003137 ORTHO05D003433 7.9e-16 89.0 215 30.7
SHI10274 Sapria himalayana HOM05D003137 ORTHO05D003433 7.9e-16 89.0 339 27.1
Solyc04g080050.4 Solanum lycopersicum HOM05D003137 ORTHO05D003433 7.9e-16 89.0 221 30.8
TWI18G1074 Tripterygium wilfordii HOM05D003137 ORTHO05D003433 7.9e-16 89.0 265 29.8
Aa31LG5G4220 Aethionema arabicum HOM05D003137 ORTHO05D003433 1.0e-15 88.6 292 27.4
Dinv15028 Davidia involucrata HOM05D003137 ORTHO05D003433 1.0e-15 88.6 275 27.6
Nn6g34282 Nelumbo nucifera HOM05D003137 ORTHO05D003433 1.0e-15 88.6 266 28.6
Peaxi162Scf00057g00421 Petunia axillaris HOM05D003137 ORTHO05D003433 1.0e-15 88.6 221 30.3
Thecc.01G369700 Theobroma cacao HOM05D003137 ORTHO05D003433 1.0e-15 88.6 259 29.0
arahy.Tifrunner.gnm1.ann1.HIPE1N Arachis hypogaea HOM05D003137 ORTHO05D003433 1.3e-15 88.2 275 28.0
CSS0004570 Camellia sinensis var. sinensis HOM05D003137 ORTHO05D003433 1.3e-15 88.2 295 28.8
CiPaw.04G118000 Carya illinoinensis HOM05D003137 ORTHO05D003433 1.3e-15 88.2 263 29.3
Psat3g112160 Pisum sativum HOM05D003137 ORTHO05D003433 1.3e-15 88.2 260 29.6
Rhsim07G0131000 Rhododendron simsii HOM05D003137 ORTHO05D003433 1.3e-15 88.2 265 28.3
FAN05G0260 Fragaria x ananassa HOM05D003137 ORTHO05D003433 1.8e-15 87.8 258 30.2
Gohir.D12G106800 Gossypium hirsutum HOM05D003137 ORTHO05D003433 1.8e-15 87.8 262 30.9
QL08p033861 Quercus lobata HOM05D003137 ORTHO05D003433 1.8e-15 87.8 220 30.5
RcHm_v2.0_Chr2g0160141 Rosa chinensis HOM05D003137 ORTHO05D003433 1.8e-15 87.8 259 28.2
CAN.G1126.28 Capsicum annuum HOM05D003137 ORTHO05D003433 2.3e-15 87.4 215 31.2
FAN14G4002 Fragaria x ananassa HOM05D003137 ORTHO05D003433 3.0e-15 87.0 258 29.8
HanXRQChr17g0560951 Helianthus annuus HOM05D003137 ORTHO05D003433 3.0e-15 87.0 302 26.8
SGA_v2.0_scaffold48G18065 Striga asiatica HOM05D003137 ORTHO05D003433 3.0e-15 87.0 215 29.8
arahy.Tifrunner.gnm1.ann1.U40R6G Arachis hypogaea HOM05D003137 ORTHO05D003433 3.9e-15 86.7 220 30.9
Lalb_Chr01g0021071 Lupinus albus HOM05D003137 ORTHO05D003433 3.9e-15 86.7 263 28.1
Actinidia11210 Actinidia chinensis HOM05D003137 ORTHO05D003433 5.1e-15 86.3 258 29.5
Glyma.09G263700 Glycine max HOM05D003137 ORTHO05D003433 5.1e-15 86.3 259 28.6
Gohir.D01G014700 Gossypium hirsutum HOM05D003137 ORTHO05D003433 5.1e-15 86.3 259 28.2
Gorai.002G016400 Gossypium raimondii HOM05D003137 ORTHO05D003433 5.1e-15 86.3 259 28.2
Zm00001eb135290 Zea mays HOM05D003137 ORTHO05D003433 5.1e-15 86.3 286 30.1
Lalb_Chr24g0393061 Lupinus albus HOM05D003137 ORTHO05D003433 6.7e-15 85.9 296 27.0
Os12g0595000 Oryza sativa ssp. japonica HOM05D003137 ORTHO05D003433 6.7e-15 85.9 286 30.1
SalBow6G6965 Salvia bowleyana HOM05D003137 ORTHO05D003433 8.7e-15 85.5 214 29.4
Thecc.02G162600 Theobroma cacao HOM05D003137 ORTHO05D003433 8.7e-15 85.5 267 30.3
Gohir.A01G013400 Gossypium hirsutum HOM05D003137 ORTHO05D003433 1.1e-14 85.1 259 28.2
Nitab4.5_0000110g0420 Nicotiana tabacum HOM05D003137 ORTHO05D003433 1.1e-14 85.1 268 28.0
Sed0002741 Sechium edule HOM05D003137 ORTHO05D003433 1.1e-14 85.1 263 28.9
Duzib132G0891 Durio zibethinus HOM05D003137 ORTHO05D003433 1.5e-14 84.7 312 27.6
Lj1g0004776 Lotus japonicus HOM05D003137 ORTHO05D003433 1.5e-14 84.7 260 28.1
Psat5g265400 Pisum sativum HOM05D003137 ORTHO05D003433 1.5e-14 84.7 301 27.2
TWI75G1854 Tripterygium wilfordii HOM05D003137 ORTHO05D003433 1.5e-14 84.7 263 29.3
AUR62027561 Chenopodium quinoa HOM05D003137 ORTHO05D003433 1.9e-14 84.3 220 29.5
Ciclev10020261m.g Citrus clementina HOM05D003137 ORTHO05D003433 1.9e-14 84.3 259 28.2
Manes.13G073300 Manihot esculenta HOM05D003137 ORTHO05D003433 1.9e-14 84.3 262 26.3
PGSC0003DMG400031494 Solanum tuberosum HOM05D003137 ORTHO05D003433 1.9e-14 84.3 217 29.5
Zm00001eb030710 Zea mays HOM05D003137 ORTHO05D003433 1.9e-14 84.3 220 29.5
Aqoxy7G03817 Aquilegia oxysepala HOM05D003137 ORTHO05D003433 2.5e-14 84.0 263 27.4
arahy.Tifrunner.gnm1.ann1.VG7JT5 Arachis hypogaea HOM05D003137 ORTHO05D003433 2.5e-14 84.0 217 30.4
TPR.G4191 Trifolium pratense HOM05D003137 ORTHO05D003433 2.5e-14 84.0 296 27.4
Ah.14g086720 Amaranthus hybridus HOM05D003137 ORTHO05D003433 3.3e-14 83.6 220 29.1
Lj3g0011099 Lotus japonicus HOM05D003137 ORTHO05D003433 3.3e-14 83.6 290 27.9
Nn7g38434 Nelumbo nucifera HOM05D003137 ORTHO05D003433 3.3e-14 83.6 271 28.0
Phvul.008G069800 Phaseolus vulgaris HOM05D003137 ORTHO05D003433 4.3e-14 83.2 258 28.3
EL10Ac8g19786 Beta vulgaris HOM05D003137 ORTHO05D003433 7.4e-14 82.4 266 27.4
AUR62035796 Chenopodium quinoa HOM05D003137 ORTHO05D003433 7.4e-14 82.4 220 29.1
Nn4g22018 Nelumbo nucifera HOM05D003137 ORTHO05D003433 7.4e-14 82.4 271 26.6
HPP92_010507 Vanilla planifolia HOM05D003137 ORTHO05D003433 7.4e-14 82.4 312 26.9
ATR0787G213 Amborella trichopoda HOM05D003137 ORTHO05D003433 9.6e-14 82.0 309 26.5
Medtr2g088870 Medicago truncatula HOM05D003137 ORTHO05D003433 1.3e-13 81.6 296 27.0
SGA_v2.0_scaffold24G10245 Striga asiatica HOM05D003137 ORTHO05D003433 1.3e-13 81.6 322 26.1
Migut.C00698 Erythranthe guttata HOM05D003137 ORTHO05D003433 2.1e-13 80.9 258 27.9
VMungo1383G1713 Vigna mungo HOM05D003137 ORTHO05D003433 2.8e-13 80.5 260 27.7
AL7G44570 Arabidopsis lyrata HOM05D003137 ORTHO05D003433 3.7e-13 80.1 259 27.8
AT5G35730 Arabidopsis thaliana HOM05D003137 ORTHO05D003433 3.7e-13 80.1 259 27.8
RcHm_v2.0_Chr1g0352051 Rosa chinensis HOM05D003137 ORTHO05D003433 3.7e-13 80.1 214 28.0
Mapoly0008s0085 Marchantia polymorpha HOM05D003137 ORTHO05D003433 4.8e-13 79.7 278 26.3
THA.LOC104827598 Tarenaya hassleriana HOM05D003137 ORTHO05D003433 4.8e-13 79.7 289 27.3
DCAR_009427 Daucus carota HOM05D003137 ORTHO05D003433 6.2e-13 79.3 220 27.7
Pp3c9_25080 Physcomitrium patens HOM05D003137 ORTHO05D003433 6.2e-13 79.3 318 26.1
Solyc07g022830.3 Solanum lycopersicum HOM05D003137 ORTHO05D003433 8.1e-13 79.0 258 26.4
Aa31LG5G17560 Aethionema arabicum HOM05D003137 ORTHO05D003433 1.4e-12 78.2 265 27.2
CARHR216920 Cardamine hirsuta HOM05D003137 ORTHO05D003433 1.8e-12 77.8 259 27.4
MCO07G031 Micromonas commoda HOM05D003137 ORTHO05D003433 1.8e-12 77.8 307 27.0
Pp3c15_24780 Physcomitrium patens HOM05D003137 ORTHO05D003433 2.4e-12 77.4 298 26.2
THA.LOC104802010 Tarenaya hassleriana HOM05D003137 ORTHO05D003433 2.4e-12 77.4 260 29.6
A04p09900 Brassica napus HOM05D003137 ORTHO05D003433 3.1e-12 77.0 259 27.4
BraA04t16653Z Brassica rapa HOM05D003137 ORTHO05D003433 3.1e-12 77.0 259 27.4
Sopen07g012160 Solanum pennellii HOM05D003137 ORTHO05D003433 3.1e-12 77.0 289 25.3
Sp7g06520 Schrenkiella parvula HOM05D003137 ORTHO05D003433 4.0e-12 76.6 259 27.4
BcaB06g26976 Brassica carinata HOM05D003137 ORTHO05D003433 5.3e-12 76.3 259 27.4
BcaC02g09490 Brassica carinata HOM05D003137 ORTHO05D003433 5.3e-12 76.3 259 27.4
C04p43380 Brassica napus HOM05D003137 ORTHO05D003433 5.3e-12 76.3 259 27.4
BolC4t25916H Brassica oleracea HOM05D003137 ORTHO05D003433 5.3e-12 76.3 259 27.4
Carub.0007s3147 Capsella rubella HOM05D003137 ORTHO05D003433 6.9e-12 75.9 259 27.0
COL.COLO4_12992 Corchorus olitorius HOM05D003137 ORTHO05D003433 1.2e-11 75.1 292 26.4
MBI13_g32436_MAGBIO Magnolia biondii HOM05D003137 ORTHO05D003433 1.5e-11 74.7 223 28.7
vmacro14192 Vaccinium macrocarpon HOM05D003137 ORTHO05D003433 2.0e-11 74.3 244 27.5
PSO782G4462 Papaver somniferum HOM05D003137 ORTHO05D003433 4.5e-11 73.2 253 27.3
DCAR_020205 Daucus carota HOM05D003137 ORTHO05D003433 1.0e-10 72.0 318 26.7
Duzib133G1508 Durio zibethinus HOM05D003137 ORTHO05D003433 1.0e-10 72.0 254 26.8
CAN.G655.4 Capsicum annuum HOM05D003137 ORTHO05D003433 1.7e-10 71.2 177 29.9
SalBow7G2186 Salvia bowleyana HOM05D003137 ORTHO05D003433 2.2e-10 70.9 270 23.7
Atru.chr6.3141 Acer truncatum HOM05D003137 ORTHO05D003433 4.9e-10 69.7 186 31.2
Sabra17G0026100 Salix brachista HOM05D003137 ORTHO05D003433 4.9e-10 69.7 219 27.4
CBR_g2888 Chara braunii HOM05D000019 ORTHO05D000002 6.5e-10 69.3 266 27.1
Sc21g0001670 Simmondsia chinensis HOM05D003137 ORTHO05D003433 6.5e-10 69.3 188 31.9
CDE02G0387 Ceratophyllum demersum HOM05D003137 ORTHO05D003433 8.4e-10 68.9 195 31.3
SMO367G1117 Selaginella moellendorffii HOM05D003137 ORTHO05D003433 1.4e-09 68.2 317 24.3
PSO478G2953 Papaver somniferum HOM05D003137 ORTHO05D003433 1.9e-09 67.8 231 22.9
Haze_12901 Corylus avellana HOM05D003137 ORTHO05D003433 3.2e-09 67.0 196 28.6
Oeu016738.1 Olea europaea HOM05D003137 ORTHO05D003433 9.3e-09 65.5 214 27.6
Cre01.g026400 Chlamydomonas reinhardtii HOM05D003137 ORTHO05D003433 2.1e-08 64.3 269 24.2
Atru.chr5.388 Acer truncatum HOM05D003137 ORTHO05D003433 2.7e-08 63.9 187 29.9
COL.COLO4_12634 Corchorus olitorius HOM05D003137 ORTHO05D003433 3.5e-08 63.5 190 30.0
Hund21479 Selenicereus undatus HOM05D003137 ORTHO05D003433 1.0e-07 62.0 293 25.9
SEGI_08676 Sequoiadendron giganteum HOM05D003137 ORTHO05D003433 1.3e-07 61.6 182 28.6
PSO170G4486 Papaver somniferum HOM05D003137 ORTHO05D003433 8.7e-07 58.9 264 24.6
PSO478G4699 Papaver somniferum HOM05D003137 ORTHO05D003433 8.7e-07 58.9 149 26.8
PSO478G4750 Papaver somniferum HOM05D003137 ORTHO05D003433 1.9e-06 57.8 239 27.6
Thhalv10004243m.g Eutrema salsugineum HOM05D003137 ORTHO05D003433 4.3e-06 56.6 257 25.3
CARHR062400 Cardamine hirsuta HOM05D000508 ORTHO05D000371 7.4e-06 55.8 267 24.0


User provided reference genes

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